RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 LPAR1Q92633 364 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 CCSER1Q9C0I3 900 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 PICK1Q9NRD5 415 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 M0R2N6 131 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 IKBKBO14920 756 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 PPP1R2P41236 205 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 STIM1Q13586 685 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 EARS2Q5JPH6 523 aaKnown RBP6.81□□□□□ -1.32
VPS50-205ENST00000441602 TYW1BQ6NUM6 668 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 LUZP1Q86V48 1076 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 AOPEPQ8N6M6 819 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 SHISA4Q96DD7 197 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 ABCB11O95342 1321 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 BIN1O00499 593 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 WDR46O15213 610 aaKnown RBP6.81□□□□□ -1.32
VPS50-205ENST00000441602 USP11P51784 963 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 MYL5Q02045 173 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 NBPF9Q3BBW0 867 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 LONRF3Q496Y0 759 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 TBC1D10BQ4KMP7 808 aaPredicted RBP6.81□□□□□ -1.32
VPS50-205ENST00000441602 MOXD1Q6UVY6 613 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 ZSCAN30Q86W11 494 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 GPC2Q8N158 579 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 GSDMAQ96QA5 445 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 RABGAP1Q9Y3P9 1069 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 GREB1LQ9C091 1923 aaPredicted RBP6.81□□□□□ -1.32
VPS50-205ENST00000441602 FER1L6Q2WGJ9 1857 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.81□□□□□ -1.32
VPS50-205ENST00000441602 ZNF76P36508 570 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 MAP3K10Q02779 954 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 PNOCQ13519 176 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 SPECC1Q5M775 1068 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 KRT79Q5XKE5 535 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 PPP4R3AQ6IN85 833 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 SARM1Q6SZW1 724 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 CABP7Q86V35 215 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 ANKRD20A12PQ8NF67 263 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 ERMNQ8TAM6 284 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 ANO3Q9BYT9 981 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 HACL1Q9UJ83 578 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 PCDHA5Q9Y5H7 936 aa6.81□□□□□ -1.32
VPS50-205ENST00000441602 ZNF646O15015 1829 aaPredicted RBP6.8□□□□□ -1.32
VPS50-205ENST00000441602 ESPNB1AK53 854 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 ACTN4O43707 911 aaKnown RBP6.8□□□□□ -1.32
VPS50-205ENST00000441602 CDC25BP30305 580 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 TPD52L1Q16890 204 aaPredicted RBP6.8□□□□□ -1.32
VPS50-205ENST00000441602 FAM83BQ5T0W9 1011 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 C11orf57Q6ZUT1 292 aaPredicted RBP6.8□□□□□ -1.32
VPS50-205ENST00000441602 MIGA2Q7L4E1 593 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 SLFN12Q8IYM2 578 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 SAMD3Q8N6K7 520 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 STK17AQ9UEE5 414 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 PRR12Q9ULL5 1215 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 KDM3AQ9Y4C1 1321 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 GCOM1H8Y6P7 765 aaPredicted RBP6.8□□□□□ -1.32
VPS50-205ENST00000441602 ZBED4O75132 1171 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 POLR2MP0CAP2 368 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 VEGFAP15692 232 aaPredicted RBP6.8□□□□□ -1.32
VPS50-205ENST00000441602 ZNF75DP51815 510 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 RASGRP2Q7LDG7 609 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 MCF2L2Q86YR7 1114 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 LRWD1Q9UFC0 647 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 DDX25Q9UHL0 483 aaKnown RBP6.8□□□□□ -1.32
VPS50-205ENST00000441602 ERCC5P28715 1186 aaPredicted RBP6.8□□□□□ -1.32
VPS50-205ENST00000441602 NF2P35240 595 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 AFMP43652 599 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 IQCB1Q15051 598 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 NOM1Q5C9Z4 860 aaKnown RBP6.8□□□□□ -1.32
VPS50-205ENST00000441602 PAGE5Q96GU1 130 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 EPSTI1Q96J88 318 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 KIAA1683Q9H0B3 1180 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 DEFB129Q9H1M3 183 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 DISC1Q9NRI5 854 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 BMP2KQ9NSY1 1161 aaPredicted RBP6.8□□□□□ -1.32
VPS50-205ENST00000441602 TMEM260Q9NX78 707 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 GPRC5DQ9NZD1 345 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 MAN1B1Q9UKM7 699 aa6.8□□□□□ -1.32
VPS50-205ENST00000441602 MYH4Q9Y623 1939 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 COL4A5P29400 1685 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 FXR2P51116 673 aaKnown RBP eCLIP6.79□□□□□ -1.32
VPS50-205ENST00000441602 PDIA5Q14554 519 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 UBE2SQ16763 222 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 DPY19L2Q6NUT2 758 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 SAMD7Q7Z3H4 446 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 SIAH1Q8IUQ4 282 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 SCYL3Q8IZE3 742 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 C4orf32Q8N8J7 132 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 NLGN2Q8NFZ4 835 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 ACER1Q8TDN7 264 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 KIFC2Q96AC6 838 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 MRFAP1L1Q96HT8 127 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 NUP88Q99567 741 aaPredicted RBP6.79□□□□□ -1.32
VPS50-205ENST00000441602 TMOD4Q9NZQ9 345 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 PITPNM2Q9BZ72 1349 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 ZNF541Q9H0D2 1346 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 TBX3O15119 743 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 CDK11BP21127 795 aaKnown RBP6.79□□□□□ -1.32
VPS50-205ENST00000441602 TXKP42681 527 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 GRIN1Q05586 938 aa6.79□□□□□ -1.32
VPS50-205ENST00000441602 SPAG1Q07617 926 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms