RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 WEE1P30291 646 aa11.83□□□□□ -0.52
SYNE2-206ENST00000441438 USP38Q8NB14 1042 aa11.83□□□□□ -0.52
SYNE2-206ENST00000441438 SH3GL3Q99963 347 aa11.83□□□□□ -0.52
SYNE2-206ENST00000441438 TTPALQ9BTX7 342 aa11.83□□□□□ -0.52
SYNE2-206ENST00000441438 STAM2O75886 525 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 RCN1Q15293 331 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 SMUG1Q53HV7 270 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 IGF2-ASQ6U949 168 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 ABRAXAS1Q6UWZ7 409 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 VPS37DQ86XT2 251 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 TEX11Q8IYF3 940 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 LMCD1Q9NZU5 365 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 LEMD3Q9Y2U8 911 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 APAF1O14727 1248 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 MBD4O95243 580 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 MAN2A2P49641 1150 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 PURAQ00577 322 aaKnown RBP11.82□□□□□ -0.52
SYNE2-206ENST00000441438 ADCY1Q08828 1119 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 DBN1Q16643 649 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 C8orf34Q49A92 452 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 C6orf118Q5T5N4 469 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 HOMER1Q86YM7 354 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 ZNF280CQ8ND82 737 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 FNIP1Q8TF40 1166 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 DNAJC7Q99615 494 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 SMAD5Q99717 465 aaKnown RBP11.82□□□□□ -0.52
SYNE2-206ENST00000441438 ZFYVE28Q9HCC9 887 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 AASDHPPTQ9NRN7 309 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 STIM2Q9P246 746 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 RIMKLBQ9ULI2 386 aa11.82□□□□□ -0.52
SYNE2-206ENST00000441438 TTLL13PA6NNM8 815 aa11.81□□□□□ -0.52
SYNE2-206ENST00000441438 ZBTB39O15060 712 aa11.81□□□□□ -0.52
SYNE2-206ENST00000441438 MUTP22033 750 aa11.81□□□□□ -0.52
SYNE2-206ENST00000441438 CLPPQ16740 277 aaPredicted RBP11.81□□□□□ -0.52
SYNE2-206ENST00000441438 NUTM2DQ5VT03 806 aaPredicted RBP11.81□□□□□ -0.52
SYNE2-206ENST00000441438 TCEAL8Q8IYN2 117 aa11.81□□□□□ -0.52
SYNE2-206ENST00000441438 ZNF710Q8N1W2 664 aa11.81□□□□□ -0.52
SYNE2-206ENST00000441438 ATP11CQ8NB49 1132 aa11.81□□□□□ -0.52
SYNE2-206ENST00000441438 GMCL1Q96IK5 515 aa11.81□□□□□ -0.52
SYNE2-206ENST00000441438 SETDB2Q96T68 719 aa11.81□□□□□ -0.52
SYNE2-206ENST00000441438 ZC3H7BQ9UGR2 993 aaKnown RBP11.81□□□□□ -0.52
SYNE2-206ENST00000441438 MSH6P52701 1360 aa11.81□□□□□ -0.52
SYNE2-206ENST00000441438 GNRH1P01148 92 aa11.81□□□□□ -0.52
SYNE2-206ENST00000441438 PDIA6Q15084 440 aa11.81□□□□□ -0.52
SYNE2-206ENST00000441438 SYCP1Q15431 976 aa11.81□□□□□ -0.52
SYNE2-206ENST00000441438 PARD3BQ8TEW8 1205 aa11.81□□□□□ -0.52
SYNE2-206ENST00000441438 NUP133Q8WUM0 1156 aa11.81□□□□□ -0.52
SYNE2-206ENST00000441438 TESK2Q96S53 571 aa11.81□□□□□ -0.52
SYNE2-206ENST00000441438 OSBPL10Q9BXB5 764 aa11.81□□□□□ -0.52
SYNE2-206ENST00000441438 NLRC4Q9NPP4 1024 aa11.81□□□□□ -0.52
SYNE2-206ENST00000441438 SPO11Q9Y5K1 396 aa11.81□□□□□ -0.52
SYNE2-206ENST00000441438 PLCH1Q4KWH8 1693 aa11.81□□□□□ -0.52
SYNE2-206ENST00000441438 ROBO1Q9Y6N7 1651 aa11.81□□□□□ -0.52
SYNE2-206ENST00000441438 COBLO75128 1261 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 STAMBPO95630 424 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 USP17L8P0C7I0 530 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 MCM2P49736 904 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 NEK2P51955 445 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 ANKRD1Q15327 319 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 WSCD2Q2TBF2 565 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 C1orf228Q6PIY5 440 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 CRTC1Q6UUV9 634 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 SDCCAG8Q86SQ7 713 aaPredicted RBP11.8□□□□□ -0.52
SYNE2-206ENST00000441438 LURAP1LQ8IV03 231 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 CEP57L1Q8IYX8 460 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 TOMM22Q9NS69 142 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 TCP11L1Q9NUJ3 509 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 MLLT1Q03111 559 aaPredicted RBP11.8□□□□□ -0.52
SYNE2-206ENST00000441438 ELF2Q15723 593 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 RNF20Q5VTR2 975 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 ARMC9Q7Z3E5 817 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 CCDC116Q8IYX3 515 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 MAGEB6Q8N7X4 407 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 UBR7Q8N806 425 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 FAM76AQ8TAV0 307 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 CLIP3Q96DZ5 547 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 KIAA1586Q9HCI6 787 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 C9IYK1 514 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 FRAT2O75474 233 aaPredicted RBP11.8□□□□□ -0.52
SYNE2-206ENST00000441438 ECE1P42892 770 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 PRKG2Q13237 762 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 C21orf62-AS1Q17RA5 79 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 FAM102BQ5T8I3 360 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 TMC7Q7Z402 723 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 ZNF654Q8IZM8 581 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 RBM33Q96EV2 1170 aaKnown RBP11.8□□□□□ -0.52
SYNE2-206ENST00000441438 SARGQ9BW04 601 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 TMEM260Q9NX78 707 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 PCDHGC5Q9Y5F6 944 aa11.8□□□□□ -0.52
SYNE2-206ENST00000441438 SERTM1A2A2V5 107 aa11.79□□□□□ -0.52
SYNE2-206ENST00000441438 H0YC42 278 aa11.79□□□□□ -0.52
SYNE2-206ENST00000441438 NCAM2O15394 837 aa11.79□□□□□ -0.52
SYNE2-206ENST00000441438 NMT2O60551 498 aa11.79□□□□□ -0.52
SYNE2-206ENST00000441438 FERP16591 822 aa11.79□□□□□ -0.52
SYNE2-206ENST00000441438 DAB2P98082 770 aa11.79□□□□□ -0.52
SYNE2-206ENST00000441438 PDE12Q6L8Q7 609 aaKnown RBP11.79□□□□□ -0.52
SYNE2-206ENST00000441438 XRRA1Q6P2D8 792 aa11.79□□□□□ -0.52
SYNE2-206ENST00000441438 ELAC2Q9BQ52 826 aaKnown RBP11.79□□□□□ -0.52
SYNE2-206ENST00000441438 NIFKQ9BYG3 293 aaKnown RBP11.79□□□□□ -0.52
SYNE2-206ENST00000441438 ANKIB1Q9P2G1 1089 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms