RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 PTCHD1Q96NR3 888 aa7.29□□□□□ -1.24
PFDN4-202ENST00000441080 SLC26A8Q96RN1 970 aa7.29□□□□□ -1.24
PFDN4-202ENST00000441080 G6PC3Q9BUM1 346 aa7.29□□□□□ -1.24
PFDN4-202ENST00000441080 RC3H2Q9HBD1 1191 aaKnown RBP7.29□□□□□ -1.24
PFDN4-202ENST00000441080 CYP4F3Q08477 520 aa7.28□□□□□ -1.24
PFDN4-202ENST00000441080 MAP4K2Q12851 820 aa7.28□□□□□ -1.24
PFDN4-202ENST00000441080 TMEM67Q5HYA8 995 aa7.28□□□□□ -1.24
PFDN4-202ENST00000441080 ZC3H12BQ5HYM0 836 aaKnown RBP7.28□□□□□ -1.24
PFDN4-202ENST00000441080 FOXB2Q5VYV0 432 aa7.28□□□□□ -1.24
PFDN4-202ENST00000441080 LINC01599Q8WXQ3 324 aa7.28□□□□□ -1.24
PFDN4-202ENST00000441080 OSBP2Q969R2 916 aa7.28□□□□□ -1.24
PFDN4-202ENST00000441080 KANSL2Q9H9L4 492 aa7.28□□□□□ -1.24
PFDN4-202ENST00000441080 GPRC5CQ9NQ84 441 aa7.28□□□□□ -1.24
PFDN4-202ENST00000441080 CLEC1BQ9P126 229 aa7.28□□□□□ -1.24
PFDN4-202ENST00000441080 TNFRSF10DQ9UBN6 386 aa7.28□□□□□ -1.24
PFDN4-202ENST00000441080 TBX22Q9Y458 520 aa7.28□□□□□ -1.24
PFDN4-202ENST00000441080 TRBV23-1A0A0A0MS06 115 aa7.27□□□□□ -1.25
PFDN4-202ENST00000441080 DLX3O60479 287 aa7.27□□□□□ -1.25
PFDN4-202ENST00000441080 USP2O75604 605 aaPredicted RBP7.27□□□□□ -1.25
PFDN4-202ENST00000441080 TBC1D8O95759 1140 aa7.27□□□□□ -1.25
PFDN4-202ENST00000441080 PLS3P13797 630 aa7.27□□□□□ -1.25
PFDN4-202ENST00000441080 PAMP19021 973 aa7.27□□□□□ -1.25
PFDN4-202ENST00000441080 GDNFP39905 211 aa7.27□□□□□ -1.25
PFDN4-202ENST00000441080 FAM209AQ5JX71 171 aa7.27□□□□□ -1.25
PFDN4-202ENST00000441080 NBPF11Q86T75 865 aa7.27□□□□□ -1.25
PFDN4-202ENST00000441080 SCUBE1Q8IWY4 988 aa7.27□□□□□ -1.25
PFDN4-202ENST00000441080 OXR1Q8N573 874 aa7.27□□□□□ -1.25
PFDN4-202ENST00000441080 ANKS4BQ8N8V4 417 aa7.27□□□□□ -1.25
PFDN4-202ENST00000441080 PDZD8Q8NEN9 1154 aa7.27□□□□□ -1.25
PFDN4-202ENST00000441080 NPLOC4Q8TAT6 608 aa7.27□□□□□ -1.25
PFDN4-202ENST00000441080 FRS2Q8WU20 508 aa7.27□□□□□ -1.25
PFDN4-202ENST00000441080 C1orf159Q96HA4 380 aa7.27□□□□□ -1.25
PFDN4-202ENST00000441080 HHIPL1Q96JK4 782 aa7.27□□□□□ -1.25
PFDN4-202ENST00000441080 EXOC2Q96KP1 924 aa7.27□□□□□ -1.25
PFDN4-202ENST00000441080 EBF1Q9UH73 591 aa7.27□□□□□ -1.25
PFDN4-202ENST00000441080 OAS3Q9Y6K5 1087 aaKnown RBP7.27□□□□□ -1.25
PFDN4-202ENST00000441080 TRBV23OR9-2A0A075B6M9 112 aa7.26□□□□□ -1.25
PFDN4-202ENST00000441080 NPHP3-ACAD11A0A0J9YXS1 232 aa7.26□□□□□ -1.25
PFDN4-202ENST00000441080 TLDC2A0PJX2 215 aa7.26□□□□□ -1.25
PFDN4-202ENST00000441080 L1CAMP32004 1257 aa7.26□□□□□ -1.25
PFDN4-202ENST00000441080 KIR2DL1P43626 348 aaPredicted RBP7.26□□□□□ -1.25
PFDN4-202ENST00000441080 KIR2DL2P43627 348 aaPredicted RBP7.26□□□□□ -1.25
PFDN4-202ENST00000441080 CHRNEQ04844 493 aa7.26□□□□□ -1.25
PFDN4-202ENST00000441080 SQSTM1Q13501 440 aa7.26□□□□□ -1.25
PFDN4-202ENST00000441080 LAPTM5Q13571 262 aa7.26□□□□□ -1.25
PFDN4-202ENST00000441080 SLC35F1Q5T1Q4 408 aa7.26□□□□□ -1.25
PFDN4-202ENST00000441080 HLA-DQA1Q5Y7H0 255 aa7.26□□□□□ -1.25
PFDN4-202ENST00000441080 CEP128Q6ZU80 1094 aa7.26□□□□□ -1.25
PFDN4-202ENST00000441080 SPPL2CQ8IUH8 684 aa7.26□□□□□ -1.25
PFDN4-202ENST00000441080 PPIL6Q8IXY8 311 aa7.26□□□□□ -1.25
PFDN4-202ENST00000441080 TMEM52Q8NDY8 209 aa7.26□□□□□ -1.25
PFDN4-202ENST00000441080 DHRS4Q9BTZ2 278 aa7.26□□□□□ -1.25
PFDN4-202ENST00000441080 C19orf73Q9NVV2 129 aa7.26□□□□□ -1.25
PFDN4-202ENST00000441080 CTNND2Q9UQB3 1225 aa7.26□□□□□ -1.25
PFDN4-202ENST00000441080 ESYT3A0FGR9 886 aa7.25□□□□□ -1.25
PFDN4-202ENST00000441080 FITM1A5D6W6 292 aa7.25□□□□□ -1.25
PFDN4-202ENST00000441080 FADS2P1A8MWK0 482 aa7.25□□□□□ -1.25
PFDN4-202ENST00000441080 MEFVO15553 781 aaPredicted RBP7.25□□□□□ -1.25
PFDN4-202ENST00000441080 RAC2P15153 192 aa7.25□□□□□ -1.25
PFDN4-202ENST00000441080 SUMO1P63165 101 aaKnown RBP7.25□□□□□ -1.25
PFDN4-202ENST00000441080 SLC14A2Q15849 920 aa7.25□□□□□ -1.25
PFDN4-202ENST00000441080 ACBD5Q5T8D3 534 aaPredicted RBP7.25□□□□□ -1.25
PFDN4-202ENST00000441080 USP53Q70EK8 1073 aa7.25□□□□□ -1.25
PFDN4-202ENST00000441080 JAMLQ86YT9 394 aa7.25□□□□□ -1.25
PFDN4-202ENST00000441080 Q8N3U1 123 aa7.25□□□□□ -1.25
PFDN4-202ENST00000441080 KREMEN2Q8NCW0 462 aa7.25□□□□□ -1.25
PFDN4-202ENST00000441080 TMEM260Q9NX78 707 aa7.25□□□□□ -1.25
PFDN4-202ENST00000441080 MRPS23Q9Y3D9 190 aaKnown RBP7.25□□□□□ -1.25
PFDN4-202ENST00000441080 HPXP02790 462 aa7.24□□□□□ -1.25
PFDN4-202ENST00000441080 CEBPAP49715 358 aaPredicted RBP7.24□□□□□ -1.25
PFDN4-202ENST00000441080 RTP1P59025 263 aa7.24□□□□□ -1.25
PFDN4-202ENST00000441080 ERVFC1P60507 584 aa7.24□□□□□ -1.25
PFDN4-202ENST00000441080 KCNAB2Q13303 367 aa7.24□□□□□ -1.25
PFDN4-202ENST00000441080 E4F1Q66K89 784 aaPredicted RBP7.24□□□□□ -1.25
PFDN4-202ENST00000441080 DENND5AQ6IQ26 1287 aa7.24□□□□□ -1.25
PFDN4-202ENST00000441080 SLCO6A1Q86UG4 719 aa7.24□□□□□ -1.25
PFDN4-202ENST00000441080 HOMER1Q86YM7 354 aa7.24□□□□□ -1.25
PFDN4-202ENST00000441080 CPNE8Q86YQ8 564 aa7.24□□□□□ -1.25
PFDN4-202ENST00000441080 APPBP2Q92624 585 aa7.24□□□□□ -1.25
PFDN4-202ENST00000441080 KISS1RQ969F8 398 aaPredicted RBP7.24□□□□□ -1.25
PFDN4-202ENST00000441080 MMP19Q99542 508 aa7.24□□□□□ -1.25
PFDN4-202ENST00000441080 FANCLQ9NW38 375 aa7.24□□□□□ -1.25
PFDN4-202ENST00000441080 TAF6LQ9Y6J9 622 aa7.24□□□□□ -1.25
PFDN4-202ENST00000441080 CCDC163A0A0D9SF12 145 aa7.23□□□□□ -1.25
PFDN4-202ENST00000441080 A0A1W2PQ45 241 aaPredicted RBP7.23□□□□□ -1.25
PFDN4-202ENST00000441080 A0A1W2PQY0 241 aa7.23□□□□□ -1.25
PFDN4-202ENST00000441080 IQCEQ6IPM2 695 aa7.23□□□□□ -1.25
PFDN4-202ENST00000441080 NLGN1Q8N2Q7 840 aa7.23□□□□□ -1.25
PFDN4-202ENST00000441080 DIO2Q92813 273 aa7.23□□□□□ -1.25
PFDN4-202ENST00000441080 JMJD8Q96S16 334 aa7.23□□□□□ -1.25
PFDN4-202ENST00000441080 TMEFF2Q9UIK5 374 aaPredicted RBP7.23□□□□□ -1.25
PFDN4-202ENST00000441080 BLACEA4D250 179 aa7.22□□□□□ -1.25
PFDN4-202ENST00000441080 SMARCA5O60264 1052 aaPredicted RBP7.22□□□□□ -1.25
PFDN4-202ENST00000441080 CDC45O75419 566 aa7.22□□□□□ -1.25
PFDN4-202ENST00000441080 TRHRP34981 398 aaPredicted RBP7.22□□□□□ -1.25
PFDN4-202ENST00000441080 LTBRP36941 435 aa7.22□□□□□ -1.25
PFDN4-202ENST00000441080 NR0B2Q15466 257 aa7.22□□□□□ -1.25
PFDN4-202ENST00000441080 NTRK3Q16288 839 aa7.22□□□□□ -1.25
PFDN4-202ENST00000441080 HSF5Q4G112 596 aaPredicted RBP7.22□□□□□ -1.25
PFDN4-202ENST00000441080 SDE2Q6IQ49 451 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms