RNA–Protein interactions for RNA: ENST00000441012.6

NR1H3-211, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1H3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-211ENST00000441012 MTMR4Q9NYA4 1195 aa17.1■□□□□ 0.33
NR1H3-211ENST00000441012 AKR1B15C9JRZ8 316 aaPredicted RBP17.1■□□□□ 0.33
NR1H3-211ENST00000441012 H7C1D1 291 aa17.1■□□□□ 0.33
NR1H3-211ENST00000441012 UBA7P41226 1012 aa17.1■□□□□ 0.33
NR1H3-211ENST00000441012 PAK1Q13153 545 aa17.1■□□□□ 0.33
NR1H3-211ENST00000441012 ANKRD20A12PQ8NF67 263 aa17.1■□□□□ 0.33
NR1H3-211ENST00000441012 ZNF592Q92610 1267 aa17.1■□□□□ 0.33
NR1H3-211ENST00000441012 ZNF277Q9NRM2 450 aaPredicted RBP17.1■□□□□ 0.33
NR1H3-211ENST00000441012 CGNQ9P2M7 1197 aaKnown RBP17.1■□□□□ 0.33
NR1H3-211ENST00000441012 SMCO2A6NFE2 343 aa17.09■□□□□ 0.33
NR1H3-211ENST00000441012 OR52Z1P0C646 297 aa17.09■□□□□ 0.33
NR1H3-211ENST00000441012 GTF2IP78347 998 aa17.09■□□□□ 0.33
NR1H3-211ENST00000441012 TRIM14Q14142 442 aa17.09■□□□□ 0.33
NR1H3-211ENST00000441012 INF2Q27J81 1249 aa17.09■□□□□ 0.33
NR1H3-211ENST00000441012 CHADLQ6NUI6 762 aa17.09■□□□□ 0.33
NR1H3-211ENST00000441012 NEK8Q86SG6 692 aa17.09■□□□□ 0.33
NR1H3-211ENST00000441012 NOC3LQ8WTT2 800 aaKnown RBP17.09■□□□□ 0.33
NR1H3-211ENST00000441012 TSC1Q92574 1164 aa17.09■□□□□ 0.33
NR1H3-211ENST00000441012 ZC3H12CQ9C0D7 883 aaKnown RBP17.09■□□□□ 0.33
NR1H3-211ENST00000441012 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.09■□□□□ 0.33
NR1H3-211ENST00000441012 ZNF541Q9H0D2 1346 aa17.09■□□□□ 0.33
NR1H3-211ENST00000441012 RHOBTB3O94955 611 aa17.08■□□□□ 0.32
NR1H3-211ENST00000441012 PDHBP11177 359 aa17.08■□□□□ 0.32
NR1H3-211ENST00000441012 SLC4A8Q2Y0W8 1093 aa17.08■□□□□ 0.32
NR1H3-211ENST00000441012 COBLL1Q53SF7 1204 aa17.08■□□□□ 0.32
NR1H3-211ENST00000441012 NAALADL2Q58DX5 795 aa17.08■□□□□ 0.32
NR1H3-211ENST00000441012 TRIM65Q6PJ69 517 aa17.08■□□□□ 0.32
NR1H3-211ENST00000441012 PPFIBP1Q86W92 1011 aa17.08■□□□□ 0.32
NR1H3-211ENST00000441012 RTKN2Q8IZC4 609 aa17.08■□□□□ 0.32
NR1H3-211ENST00000441012 ADSSL1Q8N142 457 aa17.08■□□□□ 0.32
NR1H3-211ENST00000441012 L3MBTL3Q96JM7 780 aaPredicted RBP17.08■□□□□ 0.32
NR1H3-211ENST00000441012 EHD4Q9H223 541 aa17.08■□□□□ 0.32
NR1H3-211ENST00000441012 TMEM60Q9H2L4 133 aa17.08■□□□□ 0.32
NR1H3-211ENST00000441012 PPP2R2CQ9Y2T4 447 aa17.08■□□□□ 0.32
NR1H3-211ENST00000441012 BAZ2BQ9UIF8 2168 aaKnown RBP17.08■□□□□ 0.32
NR1H3-211ENST00000441012 COL4A5P29400 1685 aa17.08■□□□□ 0.32
NR1H3-211ENST00000441012 STIM1Q13586 685 aa17.07■□□□□ 0.32
NR1H3-211ENST00000441012 CNGA4Q8IV77 575 aa17.07■□□□□ 0.32
NR1H3-211ENST00000441012 RASGRP4Q8TDF6 673 aa17.07■□□□□ 0.32
NR1H3-211ENST00000441012 CCDC17Q96LX7 622 aa17.07■□□□□ 0.32
NR1H3-211ENST00000441012 FEZ1Q99689 392 aa17.07■□□□□ 0.32
NR1H3-211ENST00000441012 IQCA1LA6NCM1 817 aa17.07■□□□□ 0.32
NR1H3-211ENST00000441012 NPM3O75607 178 aaKnown RBP17.07■□□□□ 0.32
NR1H3-211ENST00000441012 CASP1P29466 404 aa17.07■□□□□ 0.32
NR1H3-211ENST00000441012 HDLBPQ00341 1268 aaKnown RBP17.07■□□□□ 0.32
NR1H3-211ENST00000441012 KARSQ15046 597 aaKnown RBP17.07■□□□□ 0.32
NR1H3-211ENST00000441012 KLHL10Q6JEL2 608 aa17.07■□□□□ 0.32
NR1H3-211ENST00000441012 USP17L2Q6R6M4 530 aa17.07■□□□□ 0.32
NR1H3-211ENST00000441012 HOMER1Q86YM7 354 aa17.07■□□□□ 0.32
NR1H3-211ENST00000441012 CCDC47Q96A33 483 aaKnown RBP17.07■□□□□ 0.32
NR1H3-211ENST00000441012 C7orf25Q9BPX7 421 aa17.07■□□□□ 0.32
NR1H3-211ENST00000441012 CTNND2Q9UQB3 1225 aa17.07■□□□□ 0.32
NR1H3-211ENST00000441012 TTLL1O95922 423 aa17.06■□□□□ 0.32
NR1H3-211ENST00000441012 TPM1P09493 284 aa17.06■□□□□ 0.32
NR1H3-211ENST00000441012 AMPD3Q01432 767 aa17.06■□□□□ 0.32
NR1H3-211ENST00000441012 GPATCH4Q5T3I0 446 aaKnown RBP17.06■□□□□ 0.32
NR1H3-211ENST00000441012 SYT10Q6XYQ8 523 aa17.06■□□□□ 0.32
NR1H3-211ENST00000441012 REXO1Q8N1G1 1221 aaKnown RBP17.06■□□□□ 0.32
NR1H3-211ENST00000441012 IGSF22Q8N9C0 903 aa17.06■□□□□ 0.32
NR1H3-211ENST00000441012 GIMAP8Q8ND71 665 aaPredicted RBP17.06■□□□□ 0.32
NR1H3-211ENST00000441012 NELFBQ8WX92 580 aa17.06■□□□□ 0.32
NR1H3-211ENST00000441012 DHTKD1Q96HY7 919 aaPredicted RBP17.06■□□□□ 0.32
NR1H3-211ENST00000441012 TMX4Q9H1E5 349 aaPredicted RBP17.06■□□□□ 0.32
NR1H3-211ENST00000441012 BLZF1Q9H2G9 400 aa17.06■□□□□ 0.32
NR1H3-211ENST00000441012 THAP9Q9H5L6 903 aa17.06■□□□□ 0.32
NR1H3-211ENST00000441012 SERPINB13Q9UIV8 391 aa17.06■□□□□ 0.32
NR1H3-211ENST00000441012 USP17L5A8MUK1 530 aa17.05■□□□□ 0.32
NR1H3-211ENST00000441012 SLC26A4O43511 780 aa17.05■□□□□ 0.32
NR1H3-211ENST00000441012 KLRC4O43908 158 aa17.05■□□□□ 0.32
NR1H3-211ENST00000441012 GOLGA8HP0CJ92 632 aa17.05■□□□□ 0.32
NR1H3-211ENST00000441012 EEF1GP26641 437 aaKnown RBP17.05■□□□□ 0.32
NR1H3-211ENST00000441012 FXR2P51116 673 aaKnown RBP eCLIP17.05■□□□□ 0.32
NR1H3-211ENST00000441012 STX17P56962 302 aa17.05■□□□□ 0.32
NR1H3-211ENST00000441012 KRT31Q15323 416 aa17.05■□□□□ 0.32
NR1H3-211ENST00000441012 TCP11X2Q5H9J9 407 aa17.05■□□□□ 0.32
NR1H3-211ENST00000441012 PODNQ7Z5L7 613 aa17.05■□□□□ 0.32
NR1H3-211ENST00000441012 CABP7Q86V35 215 aa17.05■□□□□ 0.32
NR1H3-211ENST00000441012 CERS5Q8N5B7 392 aa17.05■□□□□ 0.32
NR1H3-211ENST00000441012 GLT8D2Q9H1C3 349 aa17.05■□□□□ 0.32
NR1H3-211ENST00000441012 TAF1DQ9H5J8 278 aaPredicted RBP17.05■□□□□ 0.32
NR1H3-211ENST00000441012 ZNF215Q9UL58 517 aaPredicted RBP17.05■□□□□ 0.32
NR1H3-211ENST00000441012 PNMA6FA0A0J9YX94 578 aa17.04■□□□□ 0.32
NR1H3-211ENST00000441012 A0A1W2PQC6 194 aa17.04■□□□□ 0.32
NR1H3-211ENST00000441012 TEX33O43247 280 aa17.04■□□□□ 0.32
NR1H3-211ENST00000441012 MFAP3LO75121 409 aa17.04■□□□□ 0.32
NR1H3-211ENST00000441012 HLA-DOAP06340 250 aa17.04■□□□□ 0.32
NR1H3-211ENST00000441012 PRCPP42785 496 aa17.04■□□□□ 0.32
NR1H3-211ENST00000441012 COPB1P53618 953 aaKnown RBP17.04■□□□□ 0.32
NR1H3-211ENST00000441012 ZNF543Q08ER8 600 aa17.04■□□□□ 0.32
NR1H3-211ENST00000441012 PDIA5Q14554 519 aa17.04■□□□□ 0.32
NR1H3-211ENST00000441012 COL13A1Q5TAT6 717 aaPredicted RBP17.04■□□□□ 0.32
NR1H3-211ENST00000441012 CNNM4Q6P4Q7 775 aa17.04■□□□□ 0.32
NR1H3-211ENST00000441012 DPP8Q6V1X1 898 aaPredicted RBP17.04■□□□□ 0.32
NR1H3-211ENST00000441012 TEKT1Q969V4 418 aa17.04■□□□□ 0.32
NR1H3-211ENST00000441012 MTMR9Q96QG7 549 aa17.04■□□□□ 0.32
NR1H3-211ENST00000441012 PIGSQ96S52 555 aa17.04■□□□□ 0.32
NR1H3-211ENST00000441012 NAP1L4Q99733 375 aaKnown RBP17.04■□□□□ 0.32
NR1H3-211ENST00000441012 USP40Q9NVE5 1235 aa17.04■□□□□ 0.32
NR1H3-211ENST00000441012 STK17AQ9UEE5 414 aa17.04■□□□□ 0.32
NR1H3-211ENST00000441012 TTF2Q9UNY4 1162 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms