RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 RRP12Q5JTH9 1297 aaKnown RBP13.72□□□□□ -0.21
UBE2D4-204ENST00000440899 BTNL9Q6UXG8 535 aa13.72□□□□□ -0.21
UBE2D4-204ENST00000440899 NOL8Q76FK4 1167 aaKnown RBP13.72□□□□□ -0.21
UBE2D4-204ENST00000440899 RNPC3Q96LT9 517 aaKnown RBP13.72□□□□□ -0.21
UBE2D4-204ENST00000440899 SEMA6BQ9H3T3 888 aa13.72□□□□□ -0.21
UBE2D4-204ENST00000440899 CYP39A1Q9NYL5 469 aa13.72□□□□□ -0.21
UBE2D4-204ENST00000440899 TBX21Q9UL17 535 aa13.72□□□□□ -0.21
UBE2D4-204ENST00000440899 CCPG1Q9ULG6 757 aa13.72□□□□□ -0.21
UBE2D4-204ENST00000440899 ZMYM6O95789 1325 aa13.71□□□□□ -0.21
UBE2D4-204ENST00000440899 TRIM6-TRIM34B2RNG4 842 aa13.71□□□□□ -0.21
UBE2D4-204ENST00000440899 CTAGE5O15320 804 aa13.71□□□□□ -0.21
UBE2D4-204ENST00000440899 PCP11498 1178 aaKnown RBP13.71□□□□□ -0.21
UBE2D4-204ENST00000440899 MFAP1P55081 439 aaKnown RBP13.71□□□□□ -0.21
UBE2D4-204ENST00000440899 NMIQ13287 307 aaPredicted RBP13.71□□□□□ -0.21
UBE2D4-204ENST00000440899 NSMFQ6X4W1 530 aa13.71□□□□□ -0.21
UBE2D4-204ENST00000440899 RASGRP2Q7LDG7 609 aa13.71□□□□□ -0.21
UBE2D4-204ENST00000440899 TMEM47Q9BQJ4 181 aa13.71□□□□□ -0.21
UBE2D4-204ENST00000440899 LNPKQ9C0E8 428 aa13.71□□□□□ -0.21
UBE2D4-204ENST00000440899 AP5M1Q9H0R1 490 aa13.71□□□□□ -0.21
UBE2D4-204ENST00000440899 RANBP17Q9H2T7 1088 aaKnown RBP13.71□□□□□ -0.21
UBE2D4-204ENST00000440899 RWDD1Q9H446 243 aaPredicted RBP13.71□□□□□ -0.21
UBE2D4-204ENST00000440899 CDH23Q9H251 3354 aa13.7□□□□□ -0.22
UBE2D4-204ENST00000440899 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.7□□□□□ -0.22
UBE2D4-204ENST00000440899 TLR3O15455 904 aaKnown RBP13.7□□□□□ -0.22
UBE2D4-204ENST00000440899 CABYRO75952 493 aa13.7□□□□□ -0.22
UBE2D4-204ENST00000440899 SLC16A2P36021 539 aa13.7□□□□□ -0.22
UBE2D4-204ENST00000440899 SYDE2Q5VT97 1194 aa13.7□□□□□ -0.22
UBE2D4-204ENST00000440899 IQSEC1Q6DN90 963 aa13.7□□□□□ -0.22
UBE2D4-204ENST00000440899 TTBK2Q6IQ55 1244 aa13.7□□□□□ -0.22
UBE2D4-204ENST00000440899 MFSD5Q6N075 450 aa13.7□□□□□ -0.22
UBE2D4-204ENST00000440899 MFSD6Q6ZSS7 791 aa13.7□□□□□ -0.22
UBE2D4-204ENST00000440899 ZNF589Q86UQ0 364 aaPredicted RBP13.7□□□□□ -0.22
UBE2D4-204ENST00000440899 SMC5Q8IY18 1101 aa13.7□□□□□ -0.22
UBE2D4-204ENST00000440899 RILPL2Q969X0 211 aa13.7□□□□□ -0.22
UBE2D4-204ENST00000440899 TTC14Q96N46 770 aa13.7□□□□□ -0.22
UBE2D4-204ENST00000440899 CDX2Q99626 313 aaPredicted RBP13.7□□□□□ -0.22
UBE2D4-204ENST00000440899 GNEQ9Y223 722 aaKnown RBP13.7□□□□□ -0.22
UBE2D4-204ENST00000440899 EYSQ5T1H1 3165 aa13.7□□□□□ -0.22
UBE2D4-204ENST00000440899 ASTN1O14525 1302 aa13.69□□□□□ -0.22
UBE2D4-204ENST00000440899 CCDC171Q6TFL3 1326 aa13.69□□□□□ -0.22
UBE2D4-204ENST00000440899 MCM3APO60318 1980 aa13.69□□□□□ -0.22
UBE2D4-204ENST00000440899 TMEM265A0A087WTH1 108 aa13.69□□□□□ -0.22
UBE2D4-204ENST00000440899 DYNC1LI2O43237 492 aaPredicted RBP13.69□□□□□ -0.22
UBE2D4-204ENST00000440899 ZEB2O60315 1214 aa13.69□□□□□ -0.22
UBE2D4-204ENST00000440899 HAND2P61296 217 aa13.69□□□□□ -0.22
UBE2D4-204ENST00000440899 BEX3Q00994 111 aa13.69□□□□□ -0.22
UBE2D4-204ENST00000440899 PPIGQ13427 754 aaKnown RBP eCLIP13.69□□□□□ -0.22
UBE2D4-204ENST00000440899 BAATQ14032 418 aaPredicted RBP13.69□□□□□ -0.22
UBE2D4-204ENST00000440899 FSCN1Q16658 493 aaKnown RBP13.69□□□□□ -0.22
UBE2D4-204ENST00000440899 AKNAD1Q5T1N1 836 aa13.69□□□□□ -0.22
UBE2D4-204ENST00000440899 TAPT1Q6NXT6 567 aa13.69□□□□□ -0.22
UBE2D4-204ENST00000440899 TLK2Q86UE8 772 aa13.69□□□□□ -0.22
UBE2D4-204ENST00000440899 SEZ6LQ9BYH1 1024 aa13.69□□□□□ -0.22
UBE2D4-204ENST00000440899 RNF41Q9H4P4 317 aaPredicted RBP13.69□□□□□ -0.22
UBE2D4-204ENST00000440899 VTA1Q9NP79 307 aa13.69□□□□□ -0.22
UBE2D4-204ENST00000440899 GPCPD1Q9NPB8 672 aa13.69□□□□□ -0.22
UBE2D4-204ENST00000440899 ADD3Q9UEY8 706 aaKnown RBP13.69□□□□□ -0.22
UBE2D4-204ENST00000440899 PNMA2Q9UL42 364 aa13.69□□□□□ -0.22
UBE2D4-204ENST00000440899 Q9Y3F1 56 aa13.69□□□□□ -0.22
UBE2D4-204ENST00000440899 PRUNE2Q8WUY3 3088 aa13.68□□□□□ -0.22
UBE2D4-204ENST00000440899 LOC102724159A0A0B4J2E5 919 aa13.68□□□□□ -0.22
UBE2D4-204ENST00000440899 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.68□□□□□ -0.22
UBE2D4-204ENST00000440899 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.68□□□□□ -0.22
UBE2D4-204ENST00000440899 PDHBP11177 359 aa13.68□□□□□ -0.22
UBE2D4-204ENST00000440899 SMPD1P17405 629 aa13.68□□□□□ -0.22
UBE2D4-204ENST00000440899 PWP2Q15269 919 aaKnown RBP13.68□□□□□ -0.22
UBE2D4-204ENST00000440899 B4GALNT3Q6L9W6 998 aa13.68□□□□□ -0.22
UBE2D4-204ENST00000440899 CXCL17Q6UXB2 119 aa13.68□□□□□ -0.22
UBE2D4-204ENST00000440899 EEPD1Q7L9B9 569 aa13.68□□□□□ -0.22
UBE2D4-204ENST00000440899 FBXO16Q8IX29 292 aaPredicted RBP13.68□□□□□ -0.22
UBE2D4-204ENST00000440899 FAM126BQ8IXS8 530 aa13.68□□□□□ -0.22
UBE2D4-204ENST00000440899 TMEM199Q8N511 208 aa13.68□□□□□ -0.22
UBE2D4-204ENST00000440899 SLC43A3Q8NBI5 491 aa13.68□□□□□ -0.22
UBE2D4-204ENST00000440899 MORC4Q8TE76 937 aa13.68□□□□□ -0.22
UBE2D4-204ENST00000440899 TTYH1Q9H313 450 aaPredicted RBP13.68□□□□□ -0.22
UBE2D4-204ENST00000440899 PDGFCQ9NRA1 345 aa13.68□□□□□ -0.22
UBE2D4-204ENST00000440899 DDX49Q9Y6V7 483 aaKnown RBP13.68□□□□□ -0.22
UBE2D4-204ENST00000440899 FRMPD2Q68DX3 1309 aaPredicted RBP13.67□□□□□ -0.22
UBE2D4-204ENST00000440899 NFIBO00712 420 aa13.67□□□□□ -0.22
UBE2D4-204ENST00000440899 CD4P01730 458 aa13.67□□□□□ -0.22
UBE2D4-204ENST00000440899 SNHG28P0DPA3 235 aa13.67□□□□□ -0.22
UBE2D4-204ENST00000440899 SDSP20132 328 aa13.67□□□□□ -0.22
UBE2D4-204ENST00000440899 NT5C2P49902 561 aa13.67□□□□□ -0.22
UBE2D4-204ENST00000440899 ZNF543Q08ER8 600 aa13.67□□□□□ -0.22
UBE2D4-204ENST00000440899 ITGA7Q13683 1181 aa13.67□□□□□ -0.22
UBE2D4-204ENST00000440899 TMEM240Q5SV17 173 aa13.67□□□□□ -0.22
UBE2D4-204ENST00000440899 KIAA1211Q6ZU35 1233 aa13.67□□□□□ -0.22
UBE2D4-204ENST00000440899 CHD1LQ86WJ1 897 aa13.67□□□□□ -0.22
UBE2D4-204ENST00000440899 PLEKHM2Q8IWE5 1019 aa13.67□□□□□ -0.22
UBE2D4-204ENST00000440899 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.67□□□□□ -0.22
UBE2D4-204ENST00000440899 ESR2Q92731 530 aa13.67□□□□□ -0.22
UBE2D4-204ENST00000440899 PURBQ96QR8 312 aaKnown RBP13.67□□□□□ -0.22
UBE2D4-204ENST00000440899 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.67□□□□□ -0.22
UBE2D4-204ENST00000440899 OSBPL3Q9H4L5 887 aa13.67□□□□□ -0.22
UBE2D4-204ENST00000440899 PTPDC1A2A3K4 754 aa13.66□□□□□ -0.22
UBE2D4-204ENST00000440899 ZNF213O14771 459 aa13.66□□□□□ -0.22
UBE2D4-204ENST00000440899 CSF2RAP15509 400 aa13.66□□□□□ -0.22
UBE2D4-204ENST00000440899 ALDH5A1P51649 535 aaPredicted RBP13.66□□□□□ -0.22
UBE2D4-204ENST00000440899 NUCB1Q02818 461 aa13.66□□□□□ -0.22
UBE2D4-204ENST00000440899 DUSP28Q4G0W2 176 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms