RNA–Protein interactions for RNA: ENST00000440860.1

LINC00354-202, long intergenic non-protein coding RNA 354, humanhuman

TSL 2 BASIC

Gene LINC00354, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00354-202ENST00000440860 GBP3Q9H0R5 595 aa7.94□□□□□ -1.14
LINC00354-202ENST00000440860 MBD1Q9UIS9 605 aaPredicted RBP7.94□□□□□ -1.14
LINC00354-202ENST00000440860 KCTD3Q9Y597 815 aa7.94□□□□□ -1.14
LINC00354-202ENST00000440860 ABLIM1O14639 778 aa7.93□□□□□ -1.14
LINC00354-202ENST00000440860 YBX1P67809 324 aaKnown RBP7.93□□□□□ -1.14
LINC00354-202ENST00000440860 FAM169BQ8N8A8 192 aa7.93□□□□□ -1.14
LINC00354-202ENST00000440860 KLHL6Q8WZ60 621 aa7.93□□□□□ -1.14
LINC00354-202ENST00000440860 PTCHD1Q96NR3 888 aa7.93□□□□□ -1.14
LINC00354-202ENST00000440860 CNTD2Q9H8S5 307 aa7.93□□□□□ -1.14
LINC00354-202ENST00000440860 CCDC9Q9Y3X0 531 aaKnown RBP7.93□□□□□ -1.14
LINC00354-202ENST00000440860 MSL3P1P0C860 447 aa7.92□□□□□ -1.14
LINC00354-202ENST00000440860 ERCC5P28715 1186 aaPredicted RBP7.92□□□□□ -1.14
LINC00354-202ENST00000440860 CASP7P55210 303 aa7.92□□□□□ -1.14
LINC00354-202ENST00000440860 OLFML2BQ68BL8 750 aa7.92□□□□□ -1.14
LINC00354-202ENST00000440860 VHLLQ6RSH7 139 aa7.92□□□□□ -1.14
LINC00354-202ENST00000440860 CYP2R1Q6VVX0 501 aa7.92□□□□□ -1.14
LINC00354-202ENST00000440860 VPS37DQ86XT2 251 aa7.92□□□□□ -1.14
LINC00354-202ENST00000440860 MCMBPQ9BTE3 642 aa7.92□□□□□ -1.14
LINC00354-202ENST00000440860 MRVI1Q9Y6F6 885 aa7.92□□□□□ -1.14
LINC00354-202ENST00000440860 EPHB3P54753 998 aa7.91□□□□□ -1.14
LINC00354-202ENST00000440860 SSPNQ14714 243 aa7.91□□□□□ -1.14
LINC00354-202ENST00000440860 ZNF385BQ569K4 471 aa7.91□□□□□ -1.14
LINC00354-202ENST00000440860 TMC6Q7Z403 805 aa7.91□□□□□ -1.14
LINC00354-202ENST00000440860 AMIGO3Q86WK7 504 aa7.91□□□□□ -1.14
LINC00354-202ENST00000440860 PANK1Q8TE04 598 aa7.91□□□□□ -1.14
LINC00354-202ENST00000440860 IRAK3Q9Y616 596 aa7.91□□□□□ -1.14
LINC00354-202ENST00000440860 STXBP3O00186 592 aa7.9□□□□□ -1.14
LINC00354-202ENST00000440860 HRKO00198 91 aa7.9□□□□□ -1.14
LINC00354-202ENST00000440860 ATF4P18848 351 aaPredicted RBP7.9□□□□□ -1.14
LINC00354-202ENST00000440860 TMEM62Q0P6H9 643 aa7.9□□□□□ -1.14
LINC00354-202ENST00000440860 BICRALQ6AI39 1079 aa7.9□□□□□ -1.14
LINC00354-202ENST00000440860 ZNF428Q96B54 188 aa7.9□□□□□ -1.14
LINC00354-202ENST00000440860 APBA2Q99767 749 aa7.9□□□□□ -1.14
LINC00354-202ENST00000440860 CAPN10Q9HC96 672 aa7.9□□□□□ -1.14
LINC00354-202ENST00000440860 C2orf71A6NGG8 1288 aa7.89□□□□□ -1.15
LINC00354-202ENST00000440860 AURKAO14965 403 aa7.89□□□□□ -1.15
LINC00354-202ENST00000440860 N4BP3O15049 544 aa7.89□□□□□ -1.15
LINC00354-202ENST00000440860 PI3P19957 117 aa7.89□□□□□ -1.15
LINC00354-202ENST00000440860 TACR1P25103 407 aa7.89□□□□□ -1.15
LINC00354-202ENST00000440860 L1CAMP32004 1257 aa7.89□□□□□ -1.15
LINC00354-202ENST00000440860 SEPHS1P49903 392 aa7.89□□□□□ -1.15
LINC00354-202ENST00000440860 CDR1P51861 262 aa7.89□□□□□ -1.15
LINC00354-202ENST00000440860 NCKAP1LP55160 1127 aa7.89□□□□□ -1.15
LINC00354-202ENST00000440860 AMPD2Q01433 879 aa7.89□□□□□ -1.15
LINC00354-202ENST00000440860 RPTNQ6XPR3 784 aa7.89□□□□□ -1.15
LINC00354-202ENST00000440860 LDHDQ86WU2 507 aa7.89□□□□□ -1.15
LINC00354-202ENST00000440860 ARHGEF39Q8N4T4 335 aa7.89□□□□□ -1.15
LINC00354-202ENST00000440860 PPP1R14AQ96A00 147 aa7.89□□□□□ -1.15
LINC00354-202ENST00000440860 SIGLEC10Q96LC7 697 aa7.89□□□□□ -1.15
LINC00354-202ENST00000440860 TNFRSF12AQ9NP84 129 aa7.89□□□□□ -1.15
LINC00354-202ENST00000440860 CGGBP1Q9UFW8 167 aaPredicted RBP7.89□□□□□ -1.15
LINC00354-202ENST00000440860 STRIP2Q9ULQ0 834 aa7.89□□□□□ -1.15
LINC00354-202ENST00000440860 AKT3Q9Y243 479 aa7.89□□□□□ -1.15
LINC00354-202ENST00000440860 ANKRD34BA5PLL1 514 aa7.88□□□□□ -1.15
LINC00354-202ENST00000440860 SSBP05455 408 aaKnown RBP eCLIP7.88□□□□□ -1.15
LINC00354-202ENST00000440860 NR1I3Q14994 352 aa7.88□□□□□ -1.15
LINC00354-202ENST00000440860 EEF1DP3Q658K8 133 aa7.88□□□□□ -1.15
LINC00354-202ENST00000440860 CPNE8Q86YQ8 564 aa7.88□□□□□ -1.15
LINC00354-202ENST00000440860 MZB1Q8WU39 189 aa7.88□□□□□ -1.15
LINC00354-202ENST00000440860 RCC1LQ96I51 464 aaKnown RBP7.88□□□□□ -1.15
LINC00354-202ENST00000440860 PDLIM7Q9NR12 457 aa7.88□□□□□ -1.15
LINC00354-202ENST00000440860 SUSD2Q9UGT4 822 aa7.88□□□□□ -1.15
LINC00354-202ENST00000440860 RFXAPO00287 272 aa7.87□□□□□ -1.15
LINC00354-202ENST00000440860 KCNH1O95259 989 aa7.87□□□□□ -1.15
LINC00354-202ENST00000440860 CBX2Q14781 532 aaPredicted RBP7.87□□□□□ -1.15
LINC00354-202ENST00000440860 RCSD1Q6JBY9 416 aa7.87□□□□□ -1.15
LINC00354-202ENST00000440860 ZC3H14Q6PJT7 736 aaKnown RBP7.87□□□□□ -1.15
LINC00354-202ENST00000440860 APEX2Q9UBZ4 518 aa7.87□□□□□ -1.15
LINC00354-202ENST00000440860 DBR1Q9UK59 544 aaKnown RBP7.87□□□□□ -1.15
LINC00354-202ENST00000440860 F8W031 263 aaPredicted RBP7.86□□□□□ -1.15
LINC00354-202ENST00000440860 BMP7P18075 431 aa7.86□□□□□ -1.15
LINC00354-202ENST00000440860 TCERG1LQ5VWI1 586 aa7.86□□□□□ -1.15
LINC00354-202ENST00000440860 BACE2Q9Y5Z0 518 aa7.86□□□□□ -1.15
LINC00354-202ENST00000440860 HCFC2Q9Y5Z7 792 aa7.86□□□□□ -1.15
LINC00354-202ENST00000440860 ZC3H12DA2A288 527 aaKnown RBP7.85□□□□□ -1.15
LINC00354-202ENST00000440860 NOP56O00567 594 aaKnown RBP7.85□□□□□ -1.15
LINC00354-202ENST00000440860 SMAD7O15105 426 aaKnown RBP7.85□□□□□ -1.15
LINC00354-202ENST00000440860 BUB1BO60566 1050 aaPredicted RBP7.85□□□□□ -1.15
LINC00354-202ENST00000440860 DBHP09172 617 aa7.85□□□□□ -1.15
LINC00354-202ENST00000440860 MAPKAPK2P49137 400 aa7.85□□□□□ -1.15
LINC00354-202ENST00000440860 GNL2Q13823 731 aaKnown RBP7.85□□□□□ -1.15
LINC00354-202ENST00000440860 PAQR3Q6TCH7 311 aa7.85□□□□□ -1.15
LINC00354-202ENST00000440860 BVESQ8NE79 360 aa7.85□□□□□ -1.15
LINC00354-202ENST00000440860 NLGN2Q8NFZ4 835 aa7.85□□□□□ -1.15
LINC00354-202ENST00000440860 RWDD3Q9Y3V2 267 aa7.85□□□□□ -1.15
LINC00354-202ENST00000440860 CYBBP04839 570 aa7.84□□□□□ -1.15
LINC00354-202ENST00000440860 TCF3P15923 654 aa7.84□□□□□ -1.15
LINC00354-202ENST00000440860 PAMP19021 973 aa7.84□□□□□ -1.15
LINC00354-202ENST00000440860 ZNF200P98182 395 aaPredicted RBP7.84□□□□□ -1.15
LINC00354-202ENST00000440860 GRB10Q13322 594 aa7.84□□□□□ -1.15
LINC00354-202ENST00000440860 VMACQ2NL98 169 aa7.84□□□□□ -1.15
LINC00354-202ENST00000440860 PLEKHN1Q494U1 663 aaPredicted RBP7.84□□□□□ -1.15
LINC00354-202ENST00000440860 LARP1BQ659C4 914 aaKnown RBP7.84□□□□□ -1.15
LINC00354-202ENST00000440860 CNKSR3Q6P9H4 555 aa7.84□□□□□ -1.15
LINC00354-202ENST00000440860 IGDCC3Q8IVU1 814 aa7.84□□□□□ -1.15
LINC00354-202ENST00000440860 TMEFF1Q8IYR6 380 aa7.84□□□□□ -1.15
LINC00354-202ENST00000440860 ZNF513Q8N8E2 541 aaPredicted RBP7.84□□□□□ -1.15
LINC00354-202ENST00000440860 USP33Q8TEY7 942 aa7.84□□□□□ -1.15
LINC00354-202ENST00000440860 LGR4Q9BXB1 951 aa7.84□□□□□ -1.15
LINC00354-202ENST00000440860 RXFP1Q9HBX9 757 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms