RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 HMGCS2P54868 508 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 BACE1P56817 501 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 USP17L24Q0WX57 530 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 USP17L6PQ6QN14 398 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 FAM160B2Q86V87 743 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 TBCKQ8TEA7 893 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 CNKSR2Q8WXI2 1034 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 RANBP17Q9H2T7 1088 aaKnown RBP21.78■■□□□ 1.08
SNX17-203ENST00000440760 CLSTN2Q9H4D0 955 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.77■■□□□ 1.08
SNX17-203ENST00000440760 CLK2P49760 499 aaKnown RBP21.77■■□□□ 1.08
SNX17-203ENST00000440760 FMR1NBQ8N0W7 255 aaPredicted RBP21.77■■□□□ 1.08
SNX17-203ENST00000440760 PTPRFP10586 1907 aa21.77■■□□□ 1.08
SNX17-203ENST00000440760 CMA1P23946 247 aa21.76■■□□□ 1.07
SNX17-203ENST00000440760 ATP2C1P98194 919 aaPredicted RBP21.76■■□□□ 1.07
SNX17-203ENST00000440760 LETM2Q2VYF4 491 aa21.76■■□□□ 1.07
SNX17-203ENST00000440760 RESP18Q5W5W9 173 aa21.76■■□□□ 1.07
SNX17-203ENST00000440760 RPAP3Q9H6T3 665 aaPredicted RBP21.76■■□□□ 1.07
SNX17-203ENST00000440760 OPLAHO14841 1288 aa21.76■■□□□ 1.07
SNX17-203ENST00000440760 PPP1R12BO60237 982 aaPredicted RBP21.76■■□□□ 1.07
SNX17-203ENST00000440760 PLA2G6O60733 806 aa21.76■■□□□ 1.07
SNX17-203ENST00000440760 USP14P54578 494 aa21.76■■□□□ 1.07
SNX17-203ENST00000440760 LRSAM1Q6UWE0 723 aa21.76■■□□□ 1.07
SNX17-203ENST00000440760 SLF1Q9BQI6 1058 aa21.76■■□□□ 1.07
SNX17-203ENST00000440760 CSRNP2Q9H175 543 aa21.76■■□□□ 1.07
SNX17-203ENST00000440760 SRPRBQ9Y5M8 271 aaKnown RBP21.76■■□□□ 1.07
SNX17-203ENST00000440760 FSD2A1L4K1 749 aa21.75■■□□□ 1.07
SNX17-203ENST00000440760 MRPL12P52815 198 aaKnown RBP21.75■■□□□ 1.07
SNX17-203ENST00000440760 MAP3K9P80192 1104 aa21.75■■□□□ 1.07
SNX17-203ENST00000440760 NEK8Q86SG6 692 aa21.75■■□□□ 1.07
SNX17-203ENST00000440760 CKAP2LQ8IYA6 745 aa21.75■■□□□ 1.07
SNX17-203ENST00000440760 TNMDQ9H2S6 317 aa21.75■■□□□ 1.07
SNX17-203ENST00000440760 CLEC11AQ9Y240 323 aa21.75■■□□□ 1.07
SNX17-203ENST00000440760 GOLGA6L3A6NEY3 463 aa21.74■■□□□ 1.07
SNX17-203ENST00000440760 KINO60870 393 aaKnown RBP21.74■■□□□ 1.07
SNX17-203ENST00000440760 FLOT1O75955 427 aa21.74■■□□□ 1.07
SNX17-203ENST00000440760 BMP15O95972 392 aa21.74■■□□□ 1.07
SNX17-203ENST00000440760 CLMNQ96JQ2 1002 aa21.74■■□□□ 1.07
SNX17-203ENST00000440760 P2RX7Q99572 595 aaKnown RBP21.74■■□□□ 1.07
SNX17-203ENST00000440760 TMEM60Q9H2L4 133 aa21.74■■□□□ 1.07
SNX17-203ENST00000440760 CCNT1O60563 726 aaKnown RBP21.74■■□□□ 1.07
SNX17-203ENST00000440760 FMR1Q06787 632 aaKnown RBP eCLIP21.74■■□□□ 1.07
SNX17-203ENST00000440760 TTLL12Q14166 644 aaPredicted RBP21.74■■□□□ 1.07
SNX17-203ENST00000440760 USP49Q70CQ1 688 aa21.74■■□□□ 1.07
SNX17-203ENST00000440760 HPSEQ9Y251 543 aa21.74■■□□□ 1.07
SNX17-203ENST00000440760 RLFQ13129 1914 aa21.73■■□□□ 1.07
SNX17-203ENST00000440760 VWA3AA6NCI4 1184 aa21.73■■□□□ 1.07
SNX17-203ENST00000440760 MEIS2O14770 477 aa21.73■■□□□ 1.07
SNX17-203ENST00000440760 EDIL3O43854 480 aa21.73■■□□□ 1.07
SNX17-203ENST00000440760 MAP1SQ66K74 1059 aaPredicted RBP21.73■■□□□ 1.07
SNX17-203ENST00000440760 PNMA8AQ86V59 439 aaPredicted RBP21.73■■□□□ 1.07
SNX17-203ENST00000440760 C4orf32Q8N8J7 132 aa21.73■■□□□ 1.07
SNX17-203ENST00000440760 ELP3Q9H9T3 547 aa21.73■■□□□ 1.07
SNX17-203ENST00000440760 AFG3L2Q9Y4W6 797 aa21.73■■□□□ 1.07
SNX17-203ENST00000440760 CSADQ9Y600 493 aa21.73■■□□□ 1.07
SNX17-203ENST00000440760 COL11A1P12107 1806 aaPredicted RBP21.73■■□□□ 1.07
SNX17-203ENST00000440760 NF2P35240 595 aa21.72■■□□□ 1.07
SNX17-203ENST00000440760 IREB2P48200 963 aaKnown RBP21.72■■□□□ 1.07
SNX17-203ENST00000440760 IL17AQ16552 155 aa21.72■■□□□ 1.07
SNX17-203ENST00000440760 MAP3K11Q16584 847 aa21.72■■□□□ 1.07
SNX17-203ENST00000440760 MORC2Q9Y6X9 1032 aaPredicted RBP21.72■■□□□ 1.07
SNX17-203ENST00000440760 ZNF536O15090 1300 aa21.72■■□□□ 1.07
SNX17-203ENST00000440760 TRAF5O00463 557 aa21.72■■□□□ 1.07
SNX17-203ENST00000440760 TDP2O95551 362 aa21.72■■□□□ 1.07
SNX17-203ENST00000440760 HOXA13P31271 388 aaPredicted RBP21.72■■□□□ 1.07
SNX17-203ENST00000440760 PRPF38AQ8NAV1 312 aaKnown RBP21.72■■□□□ 1.07
SNX17-203ENST00000440760 ERCC4Q92889 916 aaPredicted RBP21.72■■□□□ 1.07
SNX17-203ENST00000440760 WNK4Q96J92 1243 aa21.72■■□□□ 1.07
SNX17-203ENST00000440760 AGBL1Q96MI9 1066 aa21.72■■□□□ 1.07
SNX17-203ENST00000440760 ZNF202O95125 648 aa21.71■■□□□ 1.07
SNX17-203ENST00000440760 SYKP43405 635 aa21.71■■□□□ 1.07
SNX17-203ENST00000440760 LDHDQ86WU2 507 aa21.71■■□□□ 1.07
SNX17-203ENST00000440760 ANO3Q9BYT9 981 aa21.71■■□□□ 1.07
SNX17-203ENST00000440760 PPP1R9AQ9ULJ8 1098 aa21.71■■□□□ 1.07
SNX17-203ENST00000440760 POTEDQ86YR6 584 aa21.7■■□□□ 1.07
SNX17-203ENST00000440760 TBC1D5Q92609 795 aa21.7■■□□□ 1.07
SNX17-203ENST00000440760 FERMT2Q96AC1 680 aa21.7■■□□□ 1.07
SNX17-203ENST00000440760 C12orf42Q96LP6 360 aa21.7■■□□□ 1.07
SNX17-203ENST00000440760 RRAGCQ9HB90 399 aa21.7■■□□□ 1.07
SNX17-203ENST00000440760 FAM237AA0A1B0GTK4 181 aa21.7■■□□□ 1.06
SNX17-203ENST00000440760 SLC37A4O43826 429 aa21.7■■□□□ 1.06
SNX17-203ENST00000440760 CPXCR1Q8N123 301 aa21.7■■□□□ 1.06
SNX17-203ENST00000440760 ZNF579Q8NAF0 562 aaKnown RBP21.7■■□□□ 1.06
SNX17-203ENST00000440760 ATG4CQ96DT6 458 aa21.7■■□□□ 1.06
SNX17-203ENST00000440760 OTUD5Q96G74 571 aa21.7■■□□□ 1.06
SNX17-203ENST00000440760 EPSTI1Q96J88 318 aa21.7■■□□□ 1.06
SNX17-203ENST00000440760 ZNF408Q9H9D4 720 aa21.7■■□□□ 1.06
SNX17-203ENST00000440760 KCNH3Q9ULD8 1083 aa21.7■■□□□ 1.06
SNX17-203ENST00000440760 CCPG1Q9ULG6 757 aa21.7■■□□□ 1.06
SNX17-203ENST00000440760 C19orf81C9J6K1 198 aa21.69■■□□□ 1.06
SNX17-203ENST00000440760 NEMFO60524 1076 aa21.69■■□□□ 1.06
SNX17-203ENST00000440760 LETM1O95202 739 aaPredicted RBP21.69■■□□□ 1.06
SNX17-203ENST00000440760 SYMPKQ92797 1274 aaKnown RBP21.69■■□□□ 1.06
SNX17-203ENST00000440760 PANK2Q9BZ23 570 aa21.69■■□□□ 1.06
SNX17-203ENST00000440760 GLT8D2Q9H1C3 349 aa21.69■■□□□ 1.06
SNX17-203ENST00000440760 TSPY26PQ9H489 355 aa21.69■■□□□ 1.06
SNX17-203ENST00000440760 RAVER2Q9HCJ3 691 aaKnown RBP21.69■■□□□ 1.06
SNX17-203ENST00000440760 CFBP00751 764 aa21.68■■□□□ 1.06
SNX17-203ENST00000440760 ICAM1P05362 532 aa21.68■■□□□ 1.06
SNX17-203ENST00000440760 RBM43Q6ZSC3 357 aaKnown RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms