RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 CLRN2A0PK11 232 aa15.96■□□□□ 0.15
LIMD1-202ENST00000440097 M0R2N6 131 aa15.96■□□□□ 0.15
LIMD1-202ENST00000440097 NOVP48745 357 aa15.96■□□□□ 0.15
LIMD1-202ENST00000440097 ZNF543Q08ER8 600 aa15.96■□□□□ 0.15
LIMD1-202ENST00000440097 PTPN21Q16825 1174 aa15.96■□□□□ 0.15
LIMD1-202ENST00000440097 ARL6IP4Q66PJ3 421 aaKnown RBP15.96■□□□□ 0.15
LIMD1-202ENST00000440097 TMCO3Q6UWJ1 677 aa15.96■□□□□ 0.15
LIMD1-202ENST00000440097 OGFOD1Q8N543 542 aa15.96■□□□□ 0.15
LIMD1-202ENST00000440097 PAGE5Q96GU1 130 aa15.96■□□□□ 0.15
LIMD1-202ENST00000440097 IDI2Q9BXS1 227 aa15.96■□□□□ 0.15
LIMD1-202ENST00000440097 RIOX1Q9H6W3 641 aa15.96■□□□□ 0.15
LIMD1-202ENST00000440097 MYO3BQ8WXR4 1341 aa15.96■□□□□ 0.14
LIMD1-202ENST00000440097 TCP10L2B9ZVM9 353 aa15.95■□□□□ 0.14
LIMD1-202ENST00000440097 SMARCA1P28370 1054 aa15.95■□□□□ 0.14
LIMD1-202ENST00000440097 ELOA2Q8IYF1 753 aaPredicted RBP15.95■□□□□ 0.14
LIMD1-202ENST00000440097 TRMT44Q8IYL2 757 aaKnown RBP15.95■□□□□ 0.14
LIMD1-202ENST00000440097 RTKN2Q8IZC4 609 aa15.95■□□□□ 0.14
LIMD1-202ENST00000440097 ADGRF4Q8IZF3 695 aa15.95■□□□□ 0.14
LIMD1-202ENST00000440097 IPO4Q8TEX9 1081 aaKnown RBP15.95■□□□□ 0.14
LIMD1-202ENST00000440097 CSRNP1Q96S65 589 aa15.95■□□□□ 0.14
LIMD1-202ENST00000440097 BLZF1Q9H2G9 400 aa15.95■□□□□ 0.14
LIMD1-202ENST00000440097 TMEM60Q9H2L4 133 aa15.95■□□□□ 0.14
LIMD1-202ENST00000440097 RGPD3A6NKT7 1758 aaPredicted RBP15.95■□□□□ 0.14
LIMD1-202ENST00000440097 RGPD4Q7Z3J3 1758 aa15.95■□□□□ 0.14
LIMD1-202ENST00000440097 EEF2P13639 858 aaKnown RBP15.95■□□□□ 0.14
LIMD1-202ENST00000440097 LONP1P36776 959 aaKnown RBP15.95■□□□□ 0.14
LIMD1-202ENST00000440097 SLC1A4P43007 532 aa15.95■□□□□ 0.14
LIMD1-202ENST00000440097 IKQ13123 557 aaPredicted RBP15.95■□□□□ 0.14
LIMD1-202ENST00000440097 SH3BP5LQ7L8J4 393 aa15.95■□□□□ 0.14
LIMD1-202ENST00000440097 MLKLQ8NB16 471 aa15.95■□□□□ 0.14
LIMD1-202ENST00000440097 NEK11Q8NG66 645 aa15.95■□□□□ 0.14
LIMD1-202ENST00000440097 UBXN4Q92575 508 aa15.95■□□□□ 0.14
LIMD1-202ENST00000440097 PLIN2Q99541 437 aa15.95■□□□□ 0.14
LIMD1-202ENST00000440097 FANCLQ9NW38 375 aa15.95■□□□□ 0.14
LIMD1-202ENST00000440097 TMEM260Q9NX78 707 aa15.95■□□□□ 0.14
LIMD1-202ENST00000440097 DNAI1Q9UI46 699 aa15.95■□□□□ 0.14
LIMD1-202ENST00000440097 ZBTB12Q9Y330 459 aaPredicted RBP15.95■□□□□ 0.14
LIMD1-202ENST00000440097 UBA7P41226 1012 aa15.94■□□□□ 0.14
LIMD1-202ENST00000440097 STAT6P42226 847 aa15.94■□□□□ 0.14
LIMD1-202ENST00000440097 ADCY7P51828 1080 aa15.94■□□□□ 0.14
LIMD1-202ENST00000440097 FANCCQ00597 558 aa15.94■□□□□ 0.14
LIMD1-202ENST00000440097 SEPT2Q15019 361 aa15.94■□□□□ 0.14
LIMD1-202ENST00000440097 KARSQ15046 597 aaKnown RBP15.94■□□□□ 0.14
LIMD1-202ENST00000440097 GPATCH4Q5T3I0 446 aaKnown RBP15.94■□□□□ 0.14
LIMD1-202ENST00000440097 NEK8Q86SG6 692 aa15.94■□□□□ 0.14
LIMD1-202ENST00000440097 TBCKQ8TEA7 893 aa15.94■□□□□ 0.14
LIMD1-202ENST00000440097 ARGLU1Q9NWB6 273 aaPredicted RBP15.94■□□□□ 0.14
LIMD1-202ENST00000440097 PP2D1A8MPX8 630 aa15.94■□□□□ 0.14
LIMD1-202ENST00000440097 ICA1Q05084 483 aa15.94■□□□□ 0.14
LIMD1-202ENST00000440097 KANSL2Q9H9L4 492 aa15.94■□□□□ 0.14
LIMD1-202ENST00000440097 SEC31AO94979 1220 aaKnown RBP15.93■□□□□ 0.14
LIMD1-202ENST00000440097 SNHG28P0DPA3 235 aa15.93■□□□□ 0.14
LIMD1-202ENST00000440097 UBASH3AP57075 661 aa15.93■□□□□ 0.14
LIMD1-202ENST00000440097 TEX35Q5T0J7 233 aa15.93■□□□□ 0.14
LIMD1-202ENST00000440097 JMJD4Q9H9V9 463 aa15.93■□□□□ 0.14
LIMD1-202ENST00000440097 USP17L10C9JJH3 530 aa15.93■□□□□ 0.14
LIMD1-202ENST00000440097 PSMD14O00487 310 aa15.93■□□□□ 0.14
LIMD1-202ENST00000440097 KCNJ6P48051 423 aa15.93■□□□□ 0.14
LIMD1-202ENST00000440097 TNNI2P48788 182 aa15.93■□□□□ 0.14
LIMD1-202ENST00000440097 SARSP49591 514 aaKnown RBP15.93■□□□□ 0.14
LIMD1-202ENST00000440097 ETF1P62495 437 aaKnown RBP15.93■□□□□ 0.14
LIMD1-202ENST00000440097 RAD51AP2Q09MP3 1159 aa15.93■□□□□ 0.14
LIMD1-202ENST00000440097 MORC3Q14149 939 aa15.93■□□□□ 0.14
LIMD1-202ENST00000440097 ABCB5Q2M3G0 1257 aa15.93■□□□□ 0.14
LIMD1-202ENST00000440097 NT5DC1Q5TFE4 455 aa15.93■□□□□ 0.14
LIMD1-202ENST00000440097 C4orf32Q8N8J7 132 aa15.93■□□□□ 0.14
LIMD1-202ENST00000440097 TRIML1Q8N9V2 468 aa15.93■□□□□ 0.14
LIMD1-202ENST00000440097 VEZTQ9HBM0 779 aa15.93■□□□□ 0.14
LIMD1-202ENST00000440097 HDAC9Q9UKV0 1011 aa15.93■□□□□ 0.14
LIMD1-202ENST00000440097 NFE2L3Q9Y4A8 694 aa15.93■□□□□ 0.14
LIMD1-202ENST00000440097 PNMA6FA0A0J9YX94 578 aa15.92■□□□□ 0.14
LIMD1-202ENST00000440097 DLGAP5Q15398 846 aa15.92■□□□□ 0.14
LIMD1-202ENST00000440097 SMYD4Q8IYR2 804 aaPredicted RBP15.92■□□□□ 0.14
LIMD1-202ENST00000440097 MNS1Q8NEH6 495 aa15.92■□□□□ 0.14
LIMD1-202ENST00000440097 DPF2Q92785 391 aa15.92■□□□□ 0.14
LIMD1-202ENST00000440097 PYM1Q9BRP8 204 aaKnown RBP15.92■□□□□ 0.14
LIMD1-202ENST00000440097 NRDCO43847 1150 aa15.92■□□□□ 0.14
LIMD1-202ENST00000440097 SLFN13Q68D06 897 aa15.92■□□□□ 0.14
LIMD1-202ENST00000440097 RSBN1LQ6PCB5 846 aaPredicted RBP15.92■□□□□ 0.14
LIMD1-202ENST00000440097 FAM177A1Q8N128 213 aaPredicted RBP15.92■□□□□ 0.14
LIMD1-202ENST00000440097 FEZ2Q9UHY8 353 aaPredicted RBP15.92■□□□□ 0.14
LIMD1-202ENST00000440097 PHLPP2Q6ZVD8 1323 aa15.92■□□□□ 0.14
LIMD1-202ENST00000440097 TUBB4AP04350 444 aa15.92■□□□□ 0.14
LIMD1-202ENST00000440097 OR52Z1P0C646 297 aa15.92■□□□□ 0.14
LIMD1-202ENST00000440097 STX17P56962 302 aa15.92■□□□□ 0.14
LIMD1-202ENST00000440097 FMR1Q06787 632 aaKnown RBP eCLIP15.92■□□□□ 0.14
LIMD1-202ENST00000440097 RRAGBQ5VZM2 374 aa15.92■□□□□ 0.14
LIMD1-202ENST00000440097 hCG_1984214I3L0E3 225 aa15.91■□□□□ 0.14
LIMD1-202ENST00000440097 GH2P01242 217 aa15.91■□□□□ 0.14
LIMD1-202ENST00000440097 UBE2SQ16763 222 aa15.91■□□□□ 0.14
LIMD1-202ENST00000440097 RBM26Q5T8P6 1007 aaKnown RBP15.91■□□□□ 0.14
LIMD1-202ENST00000440097 TMEM179Q6ZVK1 233 aa15.91■□□□□ 0.14
LIMD1-202ENST00000440097 ZNF713Q8N859 430 aaPredicted RBP15.91■□□□□ 0.14
LIMD1-202ENST00000440097 TADA3O75528 432 aa15.91■□□□□ 0.14
LIMD1-202ENST00000440097 URI1O94763 535 aaPredicted RBP15.91■□□□□ 0.14
LIMD1-202ENST00000440097 TECP42680 631 aa15.91■□□□□ 0.14
LIMD1-202ENST00000440097 DPYDQ12882 1025 aa15.91■□□□□ 0.14
LIMD1-202ENST00000440097 NIM1KQ8IY84 436 aa15.91■□□□□ 0.14
LIMD1-202ENST00000440097 PLCD3Q8N3E9 789 aa15.91■□□□□ 0.14
LIMD1-202ENST00000440097 GSDMAQ96QA5 445 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms