RNA–Protein interactions for RNA: ENST00000440081.2

TNRC18-207, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-207ENST00000440081 HIPK3Q9H422 1215 aa13.23□□□□□ -0.29
TNRC18-207ENST00000440081 A1CFQ9NQ94 594 aaKnown RBP13.23□□□□□ -0.29
TNRC18-207ENST00000440081 RNF146Q9NTX7 359 aa13.23□□□□□ -0.29
TNRC18-207ENST00000440081 ISY1Q9ULR0 285 aaKnown RBP13.23□□□□□ -0.29
TNRC18-207ENST00000440081 NCOR1O75376 2440 aa13.23□□□□□ -0.29
TNRC18-207ENST00000440081 GRIN2DO15399 1336 aa13.22□□□□□ -0.29
TNRC18-207ENST00000440081 ASB14A6NK59 587 aa13.22□□□□□ -0.29
TNRC18-207ENST00000440081 ZFYP08048 801 aaPredicted RBP13.22□□□□□ -0.29
TNRC18-207ENST00000440081 TSPY3P0CV98 308 aa13.22□□□□□ -0.29
TNRC18-207ENST00000440081 TSPY8P0CW00 308 aa13.22□□□□□ -0.29
TNRC18-207ENST00000440081 COL9A1P20849 921 aa13.22□□□□□ -0.29
TNRC18-207ENST00000440081 IGFBP4P22692 258 aa13.22□□□□□ -0.29
TNRC18-207ENST00000440081 ITGA7Q13683 1181 aa13.22□□□□□ -0.29
TNRC18-207ENST00000440081 CCDC85BQ15834 202 aaPredicted RBP13.22□□□□□ -0.29
TNRC18-207ENST00000440081 FSCN1Q16658 493 aaKnown RBP13.22□□□□□ -0.29
TNRC18-207ENST00000440081 FAM160B2Q86V87 743 aa13.22□□□□□ -0.29
TNRC18-207ENST00000440081 IFNL3Q8IZI9 196 aa13.22□□□□□ -0.29
TNRC18-207ENST00000440081 GPATCH3Q96I76 525 aa13.22□□□□□ -0.29
TNRC18-207ENST00000440081 GMCL1Q96IK5 515 aa13.22□□□□□ -0.29
TNRC18-207ENST00000440081 AGBL1Q96MI9 1066 aa13.22□□□□□ -0.29
TNRC18-207ENST00000440081 AP5M1Q9H0R1 490 aa13.22□□□□□ -0.29
TNRC18-207ENST00000440081 YBX2Q9Y2T7 364 aaKnown RBP13.22□□□□□ -0.29
TNRC18-207ENST00000440081 PATL2C9JE40 543 aaKnown RBP13.21□□□□□ -0.29
TNRC18-207ENST00000440081 DYNC1LI2O43237 492 aaPredicted RBP13.21□□□□□ -0.29
TNRC18-207ENST00000440081 ZEB2O60315 1214 aa13.21□□□□□ -0.29
TNRC18-207ENST00000440081 SMPD1P17405 629 aa13.21□□□□□ -0.29
TNRC18-207ENST00000440081 PTGS1P23219 599 aa13.21□□□□□ -0.29
TNRC18-207ENST00000440081 SLC1A4P43007 532 aa13.21□□□□□ -0.29
TNRC18-207ENST00000440081 CCL23P55773 120 aa13.21□□□□□ -0.29
TNRC18-207ENST00000440081 MRPS5P82675 430 aaKnown RBP13.21□□□□□ -0.29
TNRC18-207ENST00000440081 TFAP4Q01664 338 aa13.21□□□□□ -0.29
TNRC18-207ENST00000440081 PDE4BQ07343 736 aa13.21□□□□□ -0.29
TNRC18-207ENST00000440081 IKQ13123 557 aaPredicted RBP13.21□□□□□ -0.29
TNRC18-207ENST00000440081 TKFCQ3LXA3 575 aa13.21□□□□□ -0.29
TNRC18-207ENST00000440081 TSHZ3Q63HK5 1081 aa13.21□□□□□ -0.29
TNRC18-207ENST00000440081 OTOP2Q7RTS6 562 aa13.21□□□□□ -0.29
TNRC18-207ENST00000440081 ADAMTS19Q8TE59 1207 aa13.21□□□□□ -0.29
TNRC18-207ENST00000440081 CHURC1Q8WUH1 139 aa13.21□□□□□ -0.29
TNRC18-207ENST00000440081 STAG1Q8WVM7 1258 aa13.21□□□□□ -0.29
TNRC18-207ENST00000440081 TRERF1Q96PN7 1200 aa13.21□□□□□ -0.29
TNRC18-207ENST00000440081 NOC4LQ9BVI4 516 aaKnown RBP13.21□□□□□ -0.29
TNRC18-207ENST00000440081 SEZ6LQ9BYH1 1024 aa13.21□□□□□ -0.29
TNRC18-207ENST00000440081 WNT8AQ9H1J5 351 aa13.21□□□□□ -0.29
TNRC18-207ENST00000440081 SLC28A3Q9HAS3 691 aa13.21□□□□□ -0.29
TNRC18-207ENST00000440081 DDX49Q9Y6V7 483 aaKnown RBP13.21□□□□□ -0.29
TNRC18-207ENST00000440081 B4GALT4O60513 344 aa13.2□□□□□ -0.3
TNRC18-207ENST00000440081 ALAS1P13196 640 aa13.2□□□□□ -0.3
TNRC18-207ENST00000440081 TAPT1Q6NXT6 567 aa13.2□□□□□ -0.3
TNRC18-207ENST00000440081 FBXO16Q8IX29 292 aaPredicted RBP13.2□□□□□ -0.3
TNRC18-207ENST00000440081 CHMP4CQ96CF2 233 aa13.2□□□□□ -0.3
TNRC18-207ENST00000440081 NACAP1Q9BZK3 213 aa13.2□□□□□ -0.3
TNRC18-207ENST00000440081 TRPV6Q9H1D0 765 aa13.2□□□□□ -0.3
TNRC18-207ENST00000440081 PDGFCQ9NRA1 345 aa13.2□□□□□ -0.3
TNRC18-207ENST00000440081 Q9Y3F1 56 aa13.2□□□□□ -0.3
TNRC18-207ENST00000440081 CHD9Q3L8U1 2897 aa13.2□□□□□ -0.3
TNRC18-207ENST00000440081 LCTP09848 1927 aa13.19□□□□□ -0.3
TNRC18-207ENST00000440081 PLA2G6O60733 806 aa13.19□□□□□ -0.3
TNRC18-207ENST00000440081 SLC3A2P08195 630 aaKnown RBP13.19□□□□□ -0.3
TNRC18-207ENST00000440081 MCCP23508 829 aa13.19□□□□□ -0.3
TNRC18-207ENST00000440081 RABGGTBP53611 331 aa13.19□□□□□ -0.3
TNRC18-207ENST00000440081 PSMC6P62333 389 aa13.19□□□□□ -0.3
TNRC18-207ENST00000440081 PPARAQ07869 468 aa13.19□□□□□ -0.3
TNRC18-207ENST00000440081 LRRFIP1Q32MZ4 808 aaKnown RBP13.19□□□□□ -0.3
TNRC18-207ENST00000440081 MUM1L1Q5H9M0 696 aa13.19□□□□□ -0.3
TNRC18-207ENST00000440081 C20orf194Q5TEA3 1177 aa13.19□□□□□ -0.3
TNRC18-207ENST00000440081 IQSEC1Q6DN90 963 aa13.19□□□□□ -0.3
TNRC18-207ENST00000440081 KCTD1Q719H9 257 aa13.19□□□□□ -0.3
TNRC18-207ENST00000440081 EEPD1Q7L9B9 569 aa13.19□□□□□ -0.3
TNRC18-207ENST00000440081 RPUSD2Q8IZ73 545 aaKnown RBP13.19□□□□□ -0.3
TNRC18-207ENST00000440081 UHRF1Q96T88 793 aaPredicted RBP13.19□□□□□ -0.3
TNRC18-207ENST00000440081 NAPBQ9H115 298 aa13.19□□□□□ -0.3
TNRC18-207ENST00000440081 CYP39A1Q9NYL5 469 aa13.19□□□□□ -0.3
TNRC18-207ENST00000440081 PRR12Q9ULL5 1215 aa13.19□□□□□ -0.3
TNRC18-207ENST00000440081 SNAP25P60880 206 aa13.18□□□□□ -0.3
TNRC18-207ENST00000440081 PPP4R3BQ5MIZ7 849 aa13.18□□□□□ -0.3
TNRC18-207ENST00000440081 TMEM63BQ5T3F8 832 aa13.18□□□□□ -0.3
TNRC18-207ENST00000440081 PPP2R2DQ66LE6 453 aa13.18□□□□□ -0.3
TNRC18-207ENST00000440081 RCSD1Q6JBY9 416 aa13.18□□□□□ -0.3
TNRC18-207ENST00000440081 IL27Q8NEV9 243 aa13.18□□□□□ -0.3
TNRC18-207ENST00000440081 VWCEQ96DN2 955 aa13.18□□□□□ -0.3
TNRC18-207ENST00000440081 SCLYQ96I15 445 aa13.18□□□□□ -0.3
TNRC18-207ENST00000440081 SEC62Q99442 399 aaKnown RBP13.18□□□□□ -0.3
TNRC18-207ENST00000440081 DCTPP1Q9H773 170 aa13.18□□□□□ -0.3
TNRC18-207ENST00000440081 VTA1Q9NP79 307 aa13.18□□□□□ -0.3
TNRC18-207ENST00000440081 STX8Q9UNK0 236 aa13.18□□□□□ -0.3
TNRC18-207ENST00000440081 SLC4A7Q9Y6M7 1214 aa13.18□□□□□ -0.3
TNRC18-207ENST00000440081 MYOGP15173 224 aa13.17□□□□□ -0.3
TNRC18-207ENST00000440081 NSMFQ6X4W1 530 aa13.17□□□□□ -0.3
TNRC18-207ENST00000440081 KIAA1211Q6ZU35 1233 aa13.17□□□□□ -0.3
TNRC18-207ENST00000440081 RASGRP2Q7LDG7 609 aa13.17□□□□□ -0.3
TNRC18-207ENST00000440081 MORC4Q8TE76 937 aa13.17□□□□□ -0.3
TNRC18-207ENST00000440081 PURBQ96QR8 312 aaKnown RBP13.17□□□□□ -0.3
TNRC18-207ENST00000440081 ALDH8A1Q9H2A2 487 aaPredicted RBP13.17□□□□□ -0.3
TNRC18-207ENST00000440081 TSPYL2Q9H2G4 693 aaPredicted RBP13.17□□□□□ -0.3
TNRC18-207ENST00000440081 RAPGEFL1Q9UHV5 662 aa13.17□□□□□ -0.3
TNRC18-207ENST00000440081 CCPG1Q9ULG6 757 aa13.17□□□□□ -0.3
TNRC18-207ENST00000440081 PCDHA11Q9Y5I1 949 aa13.17□□□□□ -0.3
TNRC18-207ENST00000440081 TCF20Q9UGU0 1960 aaKnown RBP13.16□□□□□ -0.3
TNRC18-207ENST00000440081 TSPY2A6NKD2 308 aa13.16□□□□□ -0.3
TNRC18-207ENST00000440081 ZBBXA8MT70 800 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms