RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 CCSAPQ6IQ19 270 aaPredicted RBP18.87■□□□□ 0.61
ITGB1-207ENST00000439974 MFSD6Q6ZSS7 791 aa18.87■□□□□ 0.61
ITGB1-207ENST00000439974 TCP11L1Q9NUJ3 509 aa18.87■□□□□ 0.61
ITGB1-207ENST00000439974 LAMA2P24043 3122 aaKnown RBP18.86■□□□□ 0.61
ITGB1-207ENST00000439974 MYADML2A6NDP7 307 aa18.86■□□□□ 0.61
ITGB1-207ENST00000439974 ASB14A6NK59 587 aa18.86■□□□□ 0.61
ITGB1-207ENST00000439974 ADCY6O43306 1168 aa18.86■□□□□ 0.61
ITGB1-207ENST00000439974 CDC45O75419 566 aa18.86■□□□□ 0.61
ITGB1-207ENST00000439974 C6orf222P0C671 652 aaPredicted RBP18.86■□□□□ 0.61
ITGB1-207ENST00000439974 TOP1P11387 765 aaKnown RBP18.86■□□□□ 0.61
ITGB1-207ENST00000439974 GJA9P57773 515 aa18.86■□□□□ 0.61
ITGB1-207ENST00000439974 SNAP25P60880 206 aa18.86■□□□□ 0.61
ITGB1-207ENST00000439974 SHHQ15465 462 aa18.86■□□□□ 0.61
ITGB1-207ENST00000439974 IMMTQ16891 758 aaKnown RBP18.86■□□□□ 0.61
ITGB1-207ENST00000439974 PCSK9Q8NBP7 692 aaKnown RBP18.86■□□□□ 0.61
ITGB1-207ENST00000439974 GLT1D1Q96MS3 346 aa18.86■□□□□ 0.61
ITGB1-207ENST00000439974 TOX2Q96NM4 488 aa18.86■□□□□ 0.61
ITGB1-207ENST00000439974 ZKSCAN3Q9BRR0 538 aa18.86■□□□□ 0.61
ITGB1-207ENST00000439974 KATNBL1Q9H079 304 aa18.86■□□□□ 0.61
ITGB1-207ENST00000439974 UPF3AQ9H1J1 476 aaKnown RBP18.86■□□□□ 0.61
ITGB1-207ENST00000439974 CTNNA3Q9UI47 895 aa18.86■□□□□ 0.61
ITGB1-207ENST00000439974 SOWAHBA6NEL2 793 aa18.85■□□□□ 0.61
ITGB1-207ENST00000439974 KIAA0355O15063 1070 aa18.85■□□□□ 0.61
ITGB1-207ENST00000439974 PCP11498 1178 aaKnown RBP18.85■□□□□ 0.61
ITGB1-207ENST00000439974 C9orf50Q5SZB4 431 aa18.85■□□□□ 0.61
ITGB1-207ENST00000439974 FAM109BQ6ICB4 259 aaPredicted RBP18.85■□□□□ 0.61
ITGB1-207ENST00000439974 ANKRD33Q7Z3H0 272 aa18.85■□□□□ 0.61
ITGB1-207ENST00000439974 TMEM47Q9BQJ4 181 aa18.85■□□□□ 0.61
ITGB1-207ENST00000439974 LSG1Q9H089 658 aaKnown RBP18.85■□□□□ 0.61
ITGB1-207ENST00000439974 RANBP17Q9H2T7 1088 aaKnown RBP18.85■□□□□ 0.61
ITGB1-207ENST00000439974 ANO2Q9NQ90 1003 aa18.85■□□□□ 0.61
ITGB1-207ENST00000439974 CCPG1Q9ULG6 757 aa18.85■□□□□ 0.61
ITGB1-207ENST00000439974 STXBP5LQ9Y2K9 1186 aa18.85■□□□□ 0.61
ITGB1-207ENST00000439974 RBM8AQ9Y5S9 174 aaKnown RBP18.85■□□□□ 0.61
ITGB1-207ENST00000439974 ELP1O95163 1332 aa18.84■□□□□ 0.61
ITGB1-207ENST00000439974 DCDC2CA8MYV0 355 aa18.84■□□□□ 0.61
ITGB1-207ENST00000439974 B4E1Z4 1266 aa18.84■□□□□ 0.61
ITGB1-207ENST00000439974 ICAM1P05362 532 aa18.84■□□□□ 0.61
ITGB1-207ENST00000439974 ASGR1P07306 291 aa18.84■□□□□ 0.61
ITGB1-207ENST00000439974 RAG1P15918 1043 aa18.84■□□□□ 0.61
ITGB1-207ENST00000439974 ITGB8P26012 769 aa18.84■□□□□ 0.61
ITGB1-207ENST00000439974 IRX5P78411 483 aaPredicted RBP18.84■□□□□ 0.61
ITGB1-207ENST00000439974 MUM1L1Q5H9M0 696 aa18.84■□□□□ 0.61
ITGB1-207ENST00000439974 TTBK2Q6IQ55 1244 aa18.84■□□□□ 0.61
ITGB1-207ENST00000439974 BTNL9Q6UXG8 535 aa18.84■□□□□ 0.61
ITGB1-207ENST00000439974 KIAA1211Q6ZU35 1233 aa18.84■□□□□ 0.61
ITGB1-207ENST00000439974 SLC17A8Q8NDX2 589 aa18.84■□□□□ 0.61
ITGB1-207ENST00000439974 TMEM39AQ9NV64 488 aa18.84■□□□□ 0.61
ITGB1-207ENST00000439974 CYP39A1Q9NYL5 469 aa18.84■□□□□ 0.61
ITGB1-207ENST00000439974 U3KPZ7 1027 aaPredicted RBP18.84■□□□□ 0.61
ITGB1-207ENST00000439974 MROH7Q68CQ1 1323 aa18.83■□□□□ 0.61
ITGB1-207ENST00000439974 KDM4AO75164 1064 aa18.83■□□□□ 0.6
ITGB1-207ENST00000439974 CYP21A2P08686 494 aa18.83■□□□□ 0.6
ITGB1-207ENST00000439974 SLC16A2P36021 539 aa18.83■□□□□ 0.6
ITGB1-207ENST00000439974 NKX3-2P78367 333 aa18.83■□□□□ 0.6
ITGB1-207ENST00000439974 FAAP100Q0VG06 881 aa18.83■□□□□ 0.6
ITGB1-207ENST00000439974 GNASQ5JWF2 1037 aa18.83■□□□□ 0.6
ITGB1-207ENST00000439974 SYDE2Q5VT97 1194 aa18.83■□□□□ 0.6
ITGB1-207ENST00000439974 MAP4K1Q92918 833 aa18.83■□□□□ 0.6
ITGB1-207ENST00000439974 RNF41Q9H4P4 317 aaPredicted RBP18.83■□□□□ 0.6
ITGB1-207ENST00000439974 LRRC37A2A6NM11 1700 aa18.83■□□□□ 0.6
ITGB1-207ENST00000439974 FRMPD2Q68DX3 1309 aaPredicted RBP18.82■□□□□ 0.6
ITGB1-207ENST00000439974 LAMA4Q16363 1823 aa18.82■□□□□ 0.6
ITGB1-207ENST00000439974 TNFAIP2Q03169 654 aa18.82■□□□□ 0.6
ITGB1-207ENST00000439974 NSMFQ6X4W1 530 aa18.82■□□□□ 0.6
ITGB1-207ENST00000439974 TTC14Q96N46 770 aa18.82■□□□□ 0.6
ITGB1-207ENST00000439974 ASTN1O14525 1302 aa18.81■□□□□ 0.6
ITGB1-207ENST00000439974 LCTP09848 1927 aa18.81■□□□□ 0.6
ITGB1-207ENST00000439974 A0A0U1RQG5 324 aaPredicted RBP18.81■□□□□ 0.6
ITGB1-207ENST00000439974 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.81■□□□□ 0.6
ITGB1-207ENST00000439974 PDHBP11177 359 aa18.81■□□□□ 0.6
ITGB1-207ENST00000439974 FPGSQ05932 587 aa18.81■□□□□ 0.6
ITGB1-207ENST00000439974 ZNF697Q5TEC3 545 aa18.81■□□□□ 0.6
ITGB1-207ENST00000439974 STOX1Q6ZVD7 989 aa18.81■□□□□ 0.6
ITGB1-207ENST00000439974 NOL8Q76FK4 1167 aaKnown RBP18.81■□□□□ 0.6
ITGB1-207ENST00000439974 ESR2Q92731 530 aa18.81■□□□□ 0.6
ITGB1-207ENST00000439974 VTI1AQ96AJ9 217 aa18.81■□□□□ 0.6
ITGB1-207ENST00000439974 GPCPD1Q9NPB8 672 aa18.81■□□□□ 0.6
ITGB1-207ENST00000439974 GNEQ9Y223 722 aaKnown RBP18.81■□□□□ 0.6
ITGB1-207ENST00000439974 ARVCFO00192 962 aa18.8■□□□□ 0.6
ITGB1-207ENST00000439974 CTAGE5O15320 804 aa18.8■□□□□ 0.6
ITGB1-207ENST00000439974 NT5C2P49902 561 aa18.8■□□□□ 0.6
ITGB1-207ENST00000439974 CDK7P50613 346 aa18.8■□□□□ 0.6
ITGB1-207ENST00000439974 CASC1Q6TDU7 716 aa18.8■□□□□ 0.6
ITGB1-207ENST00000439974 CYB5R4Q7L1T6 521 aa18.8■□□□□ 0.6
ITGB1-207ENST00000439974 TLK2Q86UE8 772 aa18.8■□□□□ 0.6
ITGB1-207ENST00000439974 TBX21Q9UL17 535 aa18.8■□□□□ 0.6
ITGB1-207ENST00000439974 PNMA2Q9UL42 364 aa18.8■□□□□ 0.6
ITGB1-207ENST00000439974 EPHB4P54760 987 aa18.79■□□□□ 0.6
ITGB1-207ENST00000439974 SMAD3P84022 425 aaKnown RBP18.79■□□□□ 0.6
ITGB1-207ENST00000439974 BEX3Q00994 111 aa18.79■□□□□ 0.6
ITGB1-207ENST00000439974 ZNF543Q08ER8 600 aa18.79■□□□□ 0.6
ITGB1-207ENST00000439974 COL9A3Q14050 684 aaPredicted RBP18.79■□□□□ 0.6
ITGB1-207ENST00000439974 CHST3Q7LGC8 479 aa18.79■□□□□ 0.6
ITGB1-207ENST00000439974 FBXO16Q8IX29 292 aaPredicted RBP18.79■□□□□ 0.6
ITGB1-207ENST00000439974 MORC4Q8TE76 937 aa18.79■□□□□ 0.6
ITGB1-207ENST00000439974 RNPC3Q96LT9 517 aaKnown RBP18.79■□□□□ 0.6
ITGB1-207ENST00000439974 FAM161BQ96MY7 647 aa18.79■□□□□ 0.6
ITGB1-207ENST00000439974 GUCD1Q96NT3 240 aa18.79■□□□□ 0.6
ITGB1-207ENST00000439974 VTA1Q9NP79 307 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms