RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 NUTM2EB1AL46 878 aaPredicted RBP7.01□□□□□ -1.29
BDNF-211ENST00000439476 ENC1O14682 589 aa7.01□□□□□ -1.29
BDNF-211ENST00000439476 TRIM37O94972 964 aa7.01□□□□□ -1.29
BDNF-211ENST00000439476 PHKG2P15735 406 aa7.01□□□□□ -1.29
BDNF-211ENST00000439476 PDE6AP16499 860 aa7.01□□□□□ -1.29
BDNF-211ENST00000439476 GBP1P32455 592 aa7.01□□□□□ -1.29
BDNF-211ENST00000439476 RFC4P35249 363 aa7.01□□□□□ -1.29
BDNF-211ENST00000439476 FLT3P36888 993 aa7.01□□□□□ -1.29
BDNF-211ENST00000439476 INHBEP58166 350 aa7.01□□□□□ -1.29
BDNF-211ENST00000439476 PUM3Q15397 648 aaKnown RBP7.01□□□□□ -1.29
BDNF-211ENST00000439476 FYB2Q5VWT5 728 aa7.01□□□□□ -1.29
BDNF-211ENST00000439476 RBM43Q6ZSC3 357 aaKnown RBP7.01□□□□□ -1.29
BDNF-211ENST00000439476 LMNTD2Q8IXW0 634 aa7.01□□□□□ -1.29
BDNF-211ENST00000439476 SMYD4Q8IYR2 804 aaPredicted RBP7.01□□□□□ -1.29
BDNF-211ENST00000439476 PANX2Q96RD6 677 aa7.01□□□□□ -1.29
BDNF-211ENST00000439476 UNC45AQ9H3U1 944 aa7.01□□□□□ -1.29
BDNF-211ENST00000439476 WDR70Q9NW82 654 aa7.01□□□□□ -1.29
BDNF-211ENST00000439476 MYO1AQ9UBC5 1043 aa7.01□□□□□ -1.29
BDNF-211ENST00000439476 PCDH11XQ9BZA7 1347 aa7.01□□□□□ -1.29
BDNF-211ENST00000439476 PCDH11YQ9BZA8 1340 aa7.01□□□□□ -1.29
BDNF-211ENST00000439476 INO80Q9ULG1 1556 aaPredicted RBP7□□□□□ -1.29
BDNF-211ENST00000439476 CALUO43852 315 aaPredicted RBP7□□□□□ -1.29
BDNF-211ENST00000439476 COBLO75128 1261 aa7□□□□□ -1.29
BDNF-211ENST00000439476 RNF40O75150 1001 aa7□□□□□ -1.29
BDNF-211ENST00000439476 ELF1P32519 619 aa7□□□□□ -1.29
BDNF-211ENST00000439476 HPDP32754 393 aaPredicted RBP7□□□□□ -1.29
BDNF-211ENST00000439476 MAGEA1P43355 309 aa7□□□□□ -1.29
BDNF-211ENST00000439476 LIG3P49916 1009 aa7□□□□□ -1.29
BDNF-211ENST00000439476 COPB1P53618 953 aaKnown RBP7□□□□□ -1.29
BDNF-211ENST00000439476 GNGT1P63211 74 aa7□□□□□ -1.29
BDNF-211ENST00000439476 SLC7A5Q01650 507 aa7□□□□□ -1.29
BDNF-211ENST00000439476 NAA25Q14CX7 972 aa7□□□□□ -1.29
BDNF-211ENST00000439476 GSTA5Q7RTV2 222 aa7□□□□□ -1.29
BDNF-211ENST00000439476 DZIP3Q86Y13 1208 aaKnown RBP7□□□□□ -1.29
BDNF-211ENST00000439476 SUGP1Q8IWZ8 645 aaKnown RBP7□□□□□ -1.29
BDNF-211ENST00000439476 IFNL3Q8IZI9 196 aa7□□□□□ -1.29
BDNF-211ENST00000439476 RAB3IL1Q8TBN0 382 aa7□□□□□ -1.29
BDNF-211ENST00000439476 DPF2Q92785 391 aa7□□□□□ -1.29
BDNF-211ENST00000439476 GSDMAQ96QA5 445 aa7□□□□□ -1.29
BDNF-211ENST00000439476 NACA2Q9H009 215 aa7□□□□□ -1.29
BDNF-211ENST00000439476 KIF9Q9HAQ2 790 aa7□□□□□ -1.29
BDNF-211ENST00000439476 BCAP29Q9UHQ4 241 aa7□□□□□ -1.29
BDNF-211ENST00000439476 FAM184BQ9ULE4 1060 aa7□□□□□ -1.29
BDNF-211ENST00000439476 USP32Q8NFA0 1604 aa7□□□□□ -1.29
BDNF-211ENST00000439476 ATP11AP98196 1134 aa7□□□□□ -1.29
BDNF-211ENST00000439476 MAP7D1Q3KQU3 841 aa7□□□□□ -1.29
BDNF-211ENST00000439476 NBPF14Q5TI25 921 aa7□□□□□ -1.29
BDNF-211ENST00000439476 USPL1Q5W0Q7 1092 aa7□□□□□ -1.29
BDNF-211ENST00000439476 GPIHBP1Q8IV16 184 aa7□□□□□ -1.29
BDNF-211ENST00000439476 WDR24Q96S15 920 aa7□□□□□ -1.29
BDNF-211ENST00000439476 HINFPQ9BQA5 517 aa7□□□□□ -1.29
BDNF-211ENST00000439476 PUS7LQ9H0K6 701 aaKnown RBP7□□□□□ -1.29
BDNF-211ENST00000439476 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7□□□□□ -1.29
BDNF-211ENST00000439476 FBXO9Q9UK97 447 aaPredicted RBP7□□□□□ -1.29
BDNF-211ENST00000439476 TPX2Q9ULW0 747 aaKnown RBP7□□□□□ -1.29
BDNF-211ENST00000439476 CIB2O75838 187 aa7□□□□□ -1.29
BDNF-211ENST00000439476 FLOT1O75955 427 aa7□□□□□ -1.29
BDNF-211ENST00000439476 PCP11498 1178 aaKnown RBP7□□□□□ -1.29
BDNF-211ENST00000439476 CCT5P48643 541 aa7□□□□□ -1.29
BDNF-211ENST00000439476 CCNHP51946 323 aaPredicted RBP7□□□□□ -1.29
BDNF-211ENST00000439476 RNASE9P60153 205 aaKnown RBP7□□□□□ -1.29
BDNF-211ENST00000439476 NEDD9Q14511 834 aa7□□□□□ -1.29
BDNF-211ENST00000439476 PPP1R7Q15435 360 aa7□□□□□ -1.29
BDNF-211ENST00000439476 RESP18Q5W5W9 173 aa7□□□□□ -1.29
BDNF-211ENST00000439476 SYMPKQ92797 1274 aaKnown RBP7□□□□□ -1.29
BDNF-211ENST00000439476 KCNB2Q92953 911 aa7□□□□□ -1.29
BDNF-211ENST00000439476 FOXP1Q9H334 677 aaPredicted RBP7□□□□□ -1.29
BDNF-211ENST00000439476 UTP11Q9Y3A2 253 aaKnown RBP7□□□□□ -1.29
BDNF-211ENST00000439476 A2ML1A8K2U0 1454 aa7□□□□□ -1.29
BDNF-211ENST00000439476 MED23Q9ULK4 1368 aa7□□□□□ -1.29
BDNF-211ENST00000439476 CPS1P31327 1500 aa7□□□□□ -1.29
BDNF-211ENST00000439476 ZMYND10O75800 440 aa7□□□□□ -1.29
BDNF-211ENST00000439476 ZNF189O75820 626 aaPredicted RBP7□□□□□ -1.29
BDNF-211ENST00000439476 CHGBP05060 677 aa7□□□□□ -1.29
BDNF-211ENST00000439476 PARP1P09874 1014 aaKnown RBP7□□□□□ -1.29
BDNF-211ENST00000439476 IL2RBP14784 551 aa7□□□□□ -1.29
BDNF-211ENST00000439476 NR5A1Q13285 461 aa7□□□□□ -1.29
BDNF-211ENST00000439476 TCIRG1Q13488 830 aa7□□□□□ -1.29
BDNF-211ENST00000439476 CFAP221Q4G0U5 840 aa7□□□□□ -1.29
BDNF-211ENST00000439476 LGSNQ5TDP6 509 aa7□□□□□ -1.29
BDNF-211ENST00000439476 PI16Q6UXB8 463 aa7□□□□□ -1.29
BDNF-211ENST00000439476 SPATA5Q8NB90 893 aa7□□□□□ -1.29
BDNF-211ENST00000439476 LPIN2Q92539 896 aa7□□□□□ -1.29
BDNF-211ENST00000439476 STMN2Q93045 179 aa7□□□□□ -1.29
BDNF-211ENST00000439476 TATDN2Q93075 761 aa7□□□□□ -1.29
BDNF-211ENST00000439476 CAPS2Q9BXY5 557 aa7□□□□□ -1.29
BDNF-211ENST00000439476 IFIH1Q9BYX4 1025 aaKnown RBP7□□□□□ -1.29
BDNF-211ENST00000439476 EIF3CLB5ME19 914 aaKnown RBP6.99□□□□□ -1.29
BDNF-211ENST00000439476 H7C1D1 291 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 CIAO1O76071 339 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 RASSF2P50749 326 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 EXOSC10Q01780 885 aaKnown RBP6.99□□□□□ -1.29
BDNF-211ENST00000439476 LIN9Q5TKA1 542 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 GALNT17Q6IS24 598 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 ANKRD13AQ8IZ07 590 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 ENGASEQ8NFI3 743 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 PARD3BQ8TEW8 1205 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 VTI1AQ96AJ9 217 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 IWS1Q96ST2 819 aa6.99□□□□□ -1.29
BDNF-211ENST00000439476 EIF3CQ99613 913 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms