RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 ZSCAN10Q96SZ4 725 aaPredicted RBP17.5■□□□□ 0.39
DHFR-201ENST00000439211 SRGAP2O75044 1071 aa17.5■□□□□ 0.39
DHFR-201ENST00000439211 BMP15O95972 392 aa17.5■□□□□ 0.39
DHFR-201ENST00000439211 BMP6P22004 513 aa17.5■□□□□ 0.39
DHFR-201ENST00000439211 KIF5BP33176 963 aa17.5■□□□□ 0.39
DHFR-201ENST00000439211 USP14P54578 494 aa17.5■□□□□ 0.39
DHFR-201ENST00000439211 FAM210AQ96ND0 272 aa17.5■□□□□ 0.39
DHFR-201ENST00000439211 NNTQ13423 1086 aa17.5■□□□□ 0.39
DHFR-201ENST00000439211 SLC30A9Q6PML9 568 aa17.5■□□□□ 0.39
DHFR-201ENST00000439211 FAM167BQ9BTA0 163 aa17.5■□□□□ 0.39
DHFR-201ENST00000439211 VAT1LQ9HCJ6 419 aa17.5■□□□□ 0.39
DHFR-201ENST00000439211 CCDC122Q5T0U0 273 aa17.49■□□□□ 0.39
DHFR-201ENST00000439211 DZIP1Q86YF9 867 aaKnown RBP17.49■□□□□ 0.39
DHFR-201ENST00000439211 VCPKMTQ9H867 229 aa17.49■□□□□ 0.39
DHFR-201ENST00000439211 ACTR5Q9H9F9 607 aaPredicted RBP17.49■□□□□ 0.39
DHFR-201ENST00000439211 SOS2Q07890 1332 aaPredicted RBP17.49■□□□□ 0.39
DHFR-201ENST00000439211 TRIM21P19474 475 aaKnown RBP17.49■□□□□ 0.39
DHFR-201ENST00000439211 DNA2P51530 1060 aa17.49■□□□□ 0.39
DHFR-201ENST00000439211 MRPL12P52815 198 aaKnown RBP17.49■□□□□ 0.39
DHFR-201ENST00000439211 ENOX2Q16206 610 aaKnown RBP17.49■□□□□ 0.39
DHFR-201ENST00000439211 IFT81Q8WYA0 676 aa17.49■□□□□ 0.39
DHFR-201ENST00000439211 PAGE5Q96GU1 130 aa17.49■□□□□ 0.39
DHFR-201ENST00000439211 TSC22D3Q99576 134 aa17.49■□□□□ 0.39
DHFR-201ENST00000439211 BATF3Q9NR55 127 aa17.49■□□□□ 0.39
DHFR-201ENST00000439211 MYBL1P10243 752 aa17.49■□□□□ 0.39
DHFR-201ENST00000439211 IFFO1Q0D2I5 559 aa17.49■□□□□ 0.39
DHFR-201ENST00000439211 TRIM68Q6AZZ1 485 aa17.49■□□□□ 0.39
DHFR-201ENST00000439211 MSL3Q8N5Y2 521 aaKnown RBP17.49■□□□□ 0.39
DHFR-201ENST00000439211 PLA2G12BQ9BX93 195 aa17.49■□□□□ 0.39
DHFR-201ENST00000439211 MCM9Q9NXL9 1143 aa17.49■□□□□ 0.39
DHFR-201ENST00000439211 TFCP2L1Q9NZI6 479 aa17.49■□□□□ 0.39
DHFR-201ENST00000439211 ERCC5P28715 1186 aaPredicted RBP17.48■□□□□ 0.39
DHFR-201ENST00000439211 BSDC1Q9NW68 430 aaPredicted RBP17.48■□□□□ 0.39
DHFR-201ENST00000439211 PAK1Q13153 545 aa17.48■□□□□ 0.39
DHFR-201ENST00000439211 NAA35Q5VZE5 725 aa17.48■□□□□ 0.39
DHFR-201ENST00000439211 HEATR3Q7Z4Q2 680 aa17.48■□□□□ 0.39
DHFR-201ENST00000439211 FERMT2Q96AC1 680 aa17.48■□□□□ 0.39
DHFR-201ENST00000439211 RNF26Q9BY78 433 aaPredicted RBP17.48■□□□□ 0.39
DHFR-201ENST00000439211 HDAC6Q9UBN7 1215 aa17.48■□□□□ 0.39
DHFR-201ENST00000439211 LMO7Q8WWI1 1683 aa17.48■□□□□ 0.39
DHFR-201ENST00000439211 SMIM22K7EJ46 135 aa17.48■□□□□ 0.39
DHFR-201ENST00000439211 ZNF473Q8WTR7 871 aaKnown RBP17.48■□□□□ 0.39
DHFR-201ENST00000439211 NELFBQ8WX92 580 aa17.48■□□□□ 0.39
DHFR-201ENST00000439211 TPX2Q9ULW0 747 aaKnown RBP17.48■□□□□ 0.39
DHFR-201ENST00000439211 PRPF6O94906 941 aaKnown RBP17.47■□□□□ 0.39
DHFR-201ENST00000439211 CYP19A1P11511 503 aaPredicted RBP17.47■□□□□ 0.39
DHFR-201ENST00000439211 SPAG1Q07617 926 aa17.47■□□□□ 0.39
DHFR-201ENST00000439211 MORC3Q14149 939 aa17.47■□□□□ 0.39
DHFR-201ENST00000439211 CCDC178Q5BJE1 867 aa17.47■□□□□ 0.39
DHFR-201ENST00000439211 RASGRP4Q8TDF6 673 aa17.47■□□□□ 0.39
DHFR-201ENST00000439211 ATP6V0A4Q9HBG4 840 aa17.47■□□□□ 0.39
DHFR-201ENST00000439211 GOPCQ9HD26 462 aa17.47■□□□□ 0.39
DHFR-201ENST00000439211 MST1RQ04912 1400 aa17.47■□□□□ 0.39
DHFR-201ENST00000439211 MTIF2P46199 727 aaKnown RBP17.47■□□□□ 0.39
DHFR-201ENST00000439211 AARSP49588 968 aaKnown RBP eCLIP17.47■□□□□ 0.398e-9■■■■■ 62.5
DHFR-201ENST00000439211 CRNKL1Q9BZJ0 848 aaKnown RBP17.47■□□□□ 0.39
DHFR-201ENST00000439211 ZNF652Q9Y2D9 606 aa17.47■□□□□ 0.39
DHFR-201ENST00000439211 NMT2O60551 498 aa17.47■□□□□ 0.39
DHFR-201ENST00000439211 VAV2P52735 878 aa17.47■□□□□ 0.39
DHFR-201ENST00000439211 CACNA2D3Q8IZS8 1091 aa17.47■□□□□ 0.39
DHFR-201ENST00000439211 CCT8L2Q96SF2 557 aa17.47■□□□□ 0.39
DHFR-201ENST00000439211 FAM184BQ9ULE4 1060 aa17.47■□□□□ 0.39
DHFR-201ENST00000439211 LUC7L2Q9Y383 392 aaKnown RBP17.47■□□□□ 0.39
DHFR-201ENST00000439211 STK36Q9NRP7 1315 aa17.46■□□□□ 0.39
DHFR-201ENST00000439211 A0A0U1RQJ8 604 aa17.46■□□□□ 0.39
DHFR-201ENST00000439211 MXRA7P84157 204 aa17.46■□□□□ 0.39
DHFR-201ENST00000439211 ALX1Q15699 326 aa17.46■□□□□ 0.39
DHFR-201ENST00000439211 RAD9BQ6WBX8 426 aa17.46■□□□□ 0.39
DHFR-201ENST00000439211 GPKOWQ92917 476 aaPredicted RBP eCLIP17.46■□□□□ 0.39
DHFR-201ENST00000439211 PSMB7Q99436 277 aa17.46■□□□□ 0.39
DHFR-201ENST00000439211 INTS13Q9NVM9 706 aa17.46■□□□□ 0.39
DHFR-201ENST00000439211 WDR93Q6P2C0 686 aa17.46■□□□□ 0.39
DHFR-201ENST00000439211 ARFGAP2Q8N6H7 521 aa17.46■□□□□ 0.39
DHFR-201ENST00000439211 ENAHQ8N8S7 591 aaPredicted RBP17.46■□□□□ 0.39
DHFR-201ENST00000439211 CALM1P0DP23 149 aa17.46■□□□□ 0.39
DHFR-201ENST00000439211 CALM2P0DP24 149 aa17.46■□□□□ 0.39
DHFR-201ENST00000439211 CALM3P0DP25 149 aa17.46■□□□□ 0.39
DHFR-201ENST00000439211 IDEP14735 1019 aa17.46■□□□□ 0.39
DHFR-201ENST00000439211 LSP1P33241 339 aa17.46■□□□□ 0.39
DHFR-201ENST00000439211 PAFAH1B1P43034 410 aa17.46■□□□□ 0.39
DHFR-201ENST00000439211 LRRC23Q53EV4 343 aaPredicted RBP17.46■□□□□ 0.39
DHFR-201ENST00000439211 NLRP14Q86W24 1093 aa17.46■□□□□ 0.39
DHFR-201ENST00000439211 NAA15Q9BXJ9 866 aaKnown RBP17.46■□□□□ 0.39
DHFR-201ENST00000439211 HSD3B7Q9H2F3 369 aa17.46■□□□□ 0.39
DHFR-201ENST00000439211 PECAM1P16284 738 aaPredicted RBP17.45■□□□□ 0.38
DHFR-201ENST00000439211 HDLBPQ00341 1268 aaKnown RBP17.45■□□□□ 0.38
DHFR-201ENST00000439211 HLTFQ14527 1009 aaKnown RBP eCLIP17.45■□□□□ 0.382e-7■■■■□ 21.4
DHFR-201ENST00000439211 C11orf91Q3C1V1 193 aa17.45■□□□□ 0.38
DHFR-201ENST00000439211 RCSD1Q6JBY9 416 aa17.45■□□□□ 0.38
DHFR-201ENST00000439211 GSDMAQ96QA5 445 aa17.45■□□□□ 0.38
DHFR-201ENST00000439211 TANGO6Q9C0B7 1094 aa17.45■□□□□ 0.38
DHFR-201ENST00000439211 RMND1Q9NWS8 449 aa17.45■□□□□ 0.38
DHFR-201ENST00000439211 BIN2Q9UBW5 565 aaPredicted RBP17.45■□□□□ 0.38
DHFR-201ENST00000439211 C2orf54Q08AI8 447 aa17.45■□□□□ 0.38
DHFR-201ENST00000439211 JAKMIP2Q96AA8 810 aa17.45■□□□□ 0.38
DHFR-201ENST00000439211 CCDC87Q9NVE4 849 aa17.45■□□□□ 0.38
DHFR-201ENST00000439211 ABCC12Q96J65 1359 aa17.45■□□□□ 0.38
DHFR-201ENST00000439211 DTHD1Q6ZMT9 781 aa17.45■□□□□ 0.38
DHFR-201ENST00000439211 TMTC1Q8IUR5 882 aa17.45■□□□□ 0.38
DHFR-201ENST00000439211 CDK5RAP3Q96JB5 506 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms