RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 EPOPA6NHQ4 379 aa13.49□□□□□ -0.25
CSTF3-203ENST00000438862 CTAGE5O15320 804 aa13.49□□□□□ -0.25
CSTF3-203ENST00000438862 ADCY6O43306 1168 aa13.49□□□□□ -0.25
CSTF3-203ENST00000438862 TAP1Q03518 808 aa13.49□□□□□ -0.25
CSTF3-203ENST00000438862 GRB10Q13322 594 aa13.49□□□□□ -0.25
CSTF3-203ENST00000438862 DBNDD2Q9BQY9 259 aa13.49□□□□□ -0.25
CSTF3-203ENST00000438862 PPP1R9AQ9ULJ8 1098 aa13.49□□□□□ -0.25
CSTF3-203ENST00000438862 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.48□□□□□ -0.25
CSTF3-203ENST00000438862 TK2O00142 265 aa13.48□□□□□ -0.25
CSTF3-203ENST00000438862 B4GALT4O60513 344 aa13.48□□□□□ -0.25
CSTF3-203ENST00000438862 ICA1Q05084 483 aa13.48□□□□□ -0.25
CSTF3-203ENST00000438862 TTLL4Q14679 1199 aa13.48□□□□□ -0.25
CSTF3-203ENST00000438862 TNNI3KQ59H18 835 aa13.48□□□□□ -0.25
CSTF3-203ENST00000438862 CXCL17Q6UXB2 119 aa13.48□□□□□ -0.25
CSTF3-203ENST00000438862 REPS2Q8NFH8 660 aa13.48□□□□□ -0.25
CSTF3-203ENST00000438862 VWCEQ96DN2 955 aa13.48□□□□□ -0.25
CSTF3-203ENST00000438862 AGBL1Q96MI9 1066 aa13.48□□□□□ -0.25
CSTF3-203ENST00000438862 TEX13BQ9BXU2 312 aa13.48□□□□□ -0.25
CSTF3-203ENST00000438862 TRPV6Q9H1D0 765 aa13.48□□□□□ -0.25
CSTF3-203ENST00000438862 FBXO28Q9NVF7 368 aa13.48□□□□□ -0.25
CSTF3-203ENST00000438862 MCM9Q9NXL9 1143 aa13.48□□□□□ -0.25
CSTF3-203ENST00000438862 NOB1Q9ULX3 412 aaKnown RBP13.48□□□□□ -0.25
CSTF3-203ENST00000438862 FPGT-TNNI3KV9GXZ4 949 aa13.48□□□□□ -0.25
CSTF3-203ENST00000438862 E9PSI1 815 aa13.47□□□□□ -0.25
CSTF3-203ENST00000438862 ZEB2O60315 1214 aa13.47□□□□□ -0.25
CSTF3-203ENST00000438862 LPXNO60711 386 aa13.47□□□□□ -0.25
CSTF3-203ENST00000438862 SSTR3P32745 418 aaPredicted RBP13.47□□□□□ -0.25
CSTF3-203ENST00000438862 BEX3Q00994 111 aa13.47□□□□□ -0.25
CSTF3-203ENST00000438862 LEXMQ3ZCV2 418 aa13.47□□□□□ -0.25
CSTF3-203ENST00000438862 SCLYQ96I15 445 aa13.47□□□□□ -0.25
CSTF3-203ENST00000438862 CCDC17Q96LX7 622 aa13.47□□□□□ -0.25
CSTF3-203ENST00000438862 GOPCQ9HD26 462 aa13.47□□□□□ -0.25
CSTF3-203ENST00000438862 HCSTQ9UBK5 93 aa13.47□□□□□ -0.25
CSTF3-203ENST00000438862 GRIN2DO15399 1336 aa13.46□□□□□ -0.25
CSTF3-203ENST00000438862 SUPT20HL2P0C7V6 817 aa13.46□□□□□ -0.25
CSTF3-203ENST00000438862 RFC2P35250 354 aa13.46□□□□□ -0.25
CSTF3-203ENST00000438862 FOXK2Q01167 660 aa13.46□□□□□ -0.25
CSTF3-203ENST00000438862 TNFAIP2Q03169 654 aa13.46□□□□□ -0.25
CSTF3-203ENST00000438862 PUS10Q3MIT2 529 aaKnown RBP13.46□□□□□ -0.25
CSTF3-203ENST00000438862 SNRNP48Q6IEG0 339 aaKnown RBP13.46□□□□□ -0.25
CSTF3-203ENST00000438862 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.46□□□□□ -0.25
CSTF3-203ENST00000438862 ARMCX2Q7L311 632 aa13.46□□□□□ -0.25
CSTF3-203ENST00000438862 HERC6Q8IVU3 1022 aa13.46□□□□□ -0.25
CSTF3-203ENST00000438862 RIOK1Q9BRS2 568 aaKnown RBP13.46□□□□□ -0.25
CSTF3-203ENST00000438862 CRNKL1Q9BZJ0 848 aaKnown RBP13.46□□□□□ -0.25
CSTF3-203ENST00000438862 UBE2ZQ9H832 354 aaPredicted RBP13.46□□□□□ -0.25
CSTF3-203ENST00000438862 PLA2G2EQ9NZK7 142 aa13.46□□□□□ -0.25
CSTF3-203ENST00000438862 MYH8P13535 1937 aa13.45□□□□□ -0.26
CSTF3-203ENST00000438862 MAGEB6P1A0A0J9YX57 407 aa13.45□□□□□ -0.26
CSTF3-203ENST00000438862 DCXO43602 365 aa13.45□□□□□ -0.26
CSTF3-203ENST00000438862 HNRNPUQ00839 825 aaKnown RBP eCLIP13.45□□□□□ -0.26
CSTF3-203ENST00000438862 FSCN1Q16658 493 aaKnown RBP13.45□□□□□ -0.26
CSTF3-203ENST00000438862 NOL8Q76FK4 1167 aaKnown RBP13.45□□□□□ -0.26
CSTF3-203ENST00000438862 ANKRD35Q8N283 1001 aa13.45□□□□□ -0.26
CSTF3-203ENST00000438862 AP5M1Q9H0R1 490 aa13.45□□□□□ -0.26
CSTF3-203ENST00000438862 KANSL2Q9H9L4 492 aa13.45□□□□□ -0.26
CSTF3-203ENST00000438862 MCM3APO60318 1980 aa13.45□□□□□ -0.26
CSTF3-203ENST00000438862 NAV1Q8NEY1 1877 aa13.44□□□□□ -0.26
CSTF3-203ENST00000438862 ZBED9Q6R2W3 1325 aa13.44□□□□□ -0.26
CSTF3-203ENST00000438862 BRWD1Q9NSI6 2320 aa13.44□□□□□ -0.26
CSTF3-203ENST00000438862 ATP2A1O14983 1001 aa13.44□□□□□ -0.26
CSTF3-203ENST00000438862 GNAI2P04899 355 aa13.44□□□□□ -0.26
CSTF3-203ENST00000438862 EEF2P13639 858 aaKnown RBP13.44□□□□□ -0.26
CSTF3-203ENST00000438862 AKR1B1P15121 316 aa13.44□□□□□ -0.26
CSTF3-203ENST00000438862 DEFB128Q7Z7B8 93 aa13.44□□□□□ -0.26
CSTF3-203ENST00000438862 CLEC10AQ8IUN9 316 aa13.44□□□□□ -0.26
CSTF3-203ENST00000438862 CCDC144CPQ8IYA2 1237 aa13.44□□□□□ -0.26
CSTF3-203ENST00000438862 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.44□□□□□ -0.26
CSTF3-203ENST00000438862 MFSD14AQ96MC6 490 aa13.44□□□□□ -0.26
CSTF3-203ENST00000438862 SLF1Q9BQI6 1058 aa13.44□□□□□ -0.26
CSTF3-203ENST00000438862 KATNBL1Q9H079 304 aa13.44□□□□□ -0.26
CSTF3-203ENST00000438862 ALDH8A1Q9H2A2 487 aaPredicted RBP13.44□□□□□ -0.26
CSTF3-203ENST00000438862 FBXO40Q9UH90 709 aa13.44□□□□□ -0.26
CSTF3-203ENST00000438862 GNEQ9Y223 722 aaKnown RBP13.44□□□□□ -0.26
CSTF3-203ENST00000438862 RIPK3Q9Y572 518 aa13.44□□□□□ -0.26
CSTF3-203ENST00000438862 ASTN1O14525 1302 aa13.43□□□□□ -0.26
CSTF3-203ENST00000438862 ZNF536O15090 1300 aa13.43□□□□□ -0.26
CSTF3-203ENST00000438862 WDFY4Q6ZS81 3184 aa13.43□□□□□ -0.26
CSTF3-203ENST00000438862 PNMA6EA0A0J9YXQ4 647 aa13.43□□□□□ -0.26
CSTF3-203ENST00000438862 GRXCR2A6NFK2 248 aa13.43□□□□□ -0.26
CSTF3-203ENST00000438862 ARHGEF15O94989 841 aa13.43□□□□□ -0.26
CSTF3-203ENST00000438862 PPP4R3BQ5MIZ7 849 aa13.43□□□□□ -0.26
CSTF3-203ENST00000438862 FAM83BQ5T0W9 1011 aa13.43□□□□□ -0.26
CSTF3-203ENST00000438862 PTCRAQ6ISU1 281 aaPredicted RBP13.43□□□□□ -0.26
CSTF3-203ENST00000438862 TLK2Q86UE8 772 aa13.43□□□□□ -0.26
CSTF3-203ENST00000438862 PRPF38AQ8NAV1 312 aaKnown RBP13.43□□□□□ -0.26
CSTF3-203ENST00000438862 FGD4Q96M96 766 aa13.43□□□□□ -0.26
CSTF3-203ENST00000438862 DCP1AQ9NPI6 582 aaPredicted RBP13.43□□□□□ -0.26
CSTF3-203ENST00000438862 Q9Y3F1 56 aa13.43□□□□□ -0.26
CSTF3-203ENST00000438862 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.42□□□□□ -0.26
CSTF3-203ENST00000438862 DYNC1LI2O43237 492 aaPredicted RBP13.42□□□□□ -0.26
CSTF3-203ENST00000438862 ZBED4O75132 1171 aa13.42□□□□□ -0.26
CSTF3-203ENST00000438862 BAIAP3O94812 1187 aa13.42□□□□□ -0.26
CSTF3-203ENST00000438862 CT47B1P0C2W7 299 aaPredicted RBP13.42□□□□□ -0.26
CSTF3-203ENST00000438862 KCNA5P22460 613 aa13.42□□□□□ -0.26
CSTF3-203ENST00000438862 SLFN5Q08AF3 891 aa13.42□□□□□ -0.26
CSTF3-203ENST00000438862 OS9Q13438 667 aaPredicted RBP13.42□□□□□ -0.26
CSTF3-203ENST00000438862 CHST13Q8NET6 341 aa13.42□□□□□ -0.26
CSTF3-203ENST00000438862 ARHGAP45Q92619 1136 aa13.42□□□□□ -0.26
CSTF3-203ENST00000438862 DYNLL2Q96FJ2 89 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms