RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 GRB10Q13322 594 aa5.39□□□□□ -1.55
HMGB3P12-201ENST00000438745 FBLN7Q53RD9 439 aa5.39□□□□□ -1.55
HMGB3P12-201ENST00000438745 ADGRF1Q5T601 910 aa5.39□□□□□ -1.55
HMGB3P12-201ENST00000438745 ANAPC16Q96DE5 110 aa5.39□□□□□ -1.55
HMGB3P12-201ENST00000438745 TOX2Q96NM4 488 aa5.39□□□□□ -1.55
HMGB3P12-201ENST00000438745 TNFRSF12AQ9NP84 129 aa5.39□□□□□ -1.55
HMGB3P12-201ENST00000438745 KLHL14Q9P2G3 628 aa5.39□□□□□ -1.55
HMGB3P12-201ENST00000438745 CGGBP1Q9UFW8 167 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P12-201ENST00000438745 SMG5Q9UPR3 1016 aaKnown RBP5.39□□□□□ -1.55
HMGB3P12-201ENST00000438745 TAF6LQ9Y6J9 622 aa5.39□□□□□ -1.55
HMGB3P12-201ENST00000438745 KRTAP9-7A8MTY7 169 aa5.38□□□□□ -1.55
HMGB3P12-201ENST00000438745 ABLIM1O14639 778 aa5.38□□□□□ -1.55
HMGB3P12-201ENST00000438745 SMAD7O15105 426 aaKnown RBP5.38□□□□□ -1.55
HMGB3P12-201ENST00000438745 TBC1D8O95759 1140 aa5.38□□□□□ -1.55
HMGB3P12-201ENST00000438745 ETFBP38117 255 aa5.38□□□□□ -1.55
HMGB3P12-201ENST00000438745 CORO7P57737 925 aa5.38□□□□□ -1.55
HMGB3P12-201ENST00000438745 GNL2Q13823 731 aaKnown RBP5.38□□□□□ -1.55
HMGB3P12-201ENST00000438745 PPP2R5DQ14738 602 aa5.38□□□□□ -1.55
HMGB3P12-201ENST00000438745 NCAPHQ15003 741 aa5.38□□□□□ -1.55
HMGB3P12-201ENST00000438745 KCNA10Q16322 511 aa5.38□□□□□ -1.55
HMGB3P12-201ENST00000438745 EEF1DP3Q658K8 133 aa5.38□□□□□ -1.55
HMGB3P12-201ENST00000438745 ADAT2Q7Z6V5 191 aaKnown RBP5.38□□□□□ -1.55
HMGB3P12-201ENST00000438745 AMIGO3Q86WK7 504 aa5.38□□□□□ -1.55
HMGB3P12-201ENST00000438745 SIAH1Q8IUQ4 282 aa5.38□□□□□ -1.55
HMGB3P12-201ENST00000438745 ZDHHC15Q96MV8 337 aa5.38□□□□□ -1.55
HMGB3P12-201ENST00000438745 APBA2Q99767 749 aa5.38□□□□□ -1.55
HMGB3P12-201ENST00000438745 IMPACTQ9P2X3 320 aa5.38□□□□□ -1.55
HMGB3P12-201ENST00000438745 PRKAG3Q9UGI9 489 aa5.38□□□□□ -1.55
HMGB3P12-201ENST00000438745 MBD1Q9UIS9 605 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P12-201ENST00000438745 EMC9Q9Y3B6 208 aa5.38□□□□□ -1.55
HMGB3P12-201ENST00000438745 MPOP05164 745 aa5.37□□□□□ -1.55
HMGB3P12-201ENST00000438745 CD3EP07766 207 aa5.37□□□□□ -1.55
HMGB3P12-201ENST00000438745 MSL3P1P0C860 447 aa5.37□□□□□ -1.55
HMGB3P12-201ENST00000438745 VIPR1P32241 457 aa5.37□□□□□ -1.55
HMGB3P12-201ENST00000438745 ARL4AP40617 200 aa5.37□□□□□ -1.55
HMGB3P12-201ENST00000438745 SRSF3P84103 164 aaKnown RBP5.37□□□□□ -1.55
HMGB3P12-201ENST00000438745 MCF2L2Q86YR7 1114 aa5.37□□□□□ -1.55
HMGB3P12-201ENST00000438745 NUP43Q8NFH3 380 aa5.37□□□□□ -1.55
HMGB3P12-201ENST00000438745 ADCY4Q8NFM4 1077 aa5.37□□□□□ -1.55
HMGB3P12-201ENST00000438745 COPS5Q92905 334 aa5.37□□□□□ -1.55
HMGB3P12-201ENST00000438745 MRGPRX3Q96LB0 322 aa5.37□□□□□ -1.55
HMGB3P12-201ENST00000438745 CNTD2Q9H8S5 307 aa5.37□□□□□ -1.55
HMGB3P12-201ENST00000438745 APEX2Q9UBZ4 518 aa5.37□□□□□ -1.55
HMGB3P12-201ENST00000438745 MRVI1Q9Y6F6 885 aa5.37□□□□□ -1.55
HMGB3P12-201ENST00000438745 TCAF2A6NFQ2 919 aa5.36□□□□□ -1.55
HMGB3P12-201ENST00000438745 C2orf71A6NGG8 1288 aa5.36□□□□□ -1.55
HMGB3P12-201ENST00000438745 NPIPB6E9PJ23 425 aa5.36□□□□□ -1.55
HMGB3P12-201ENST00000438745 CAPNS1P04632 268 aa5.36□□□□□ -1.55
HMGB3P12-201ENST00000438745 SSBP05455 408 aaKnown RBP eCLIP5.36□□□□□ -1.55
HMGB3P12-201ENST00000438745 SDHBP21912 280 aa5.36□□□□□ -1.55
HMGB3P12-201ENST00000438745 AMPD2Q01433 879 aa5.36□□□□□ -1.55
HMGB3P12-201ENST00000438745 ARID5AQ03989 594 aa5.36□□□□□ -1.55
HMGB3P12-201ENST00000438745 TNNI3KQ59H18 835 aa5.36□□□□□ -1.55
HMGB3P12-201ENST00000438745 NAT16Q8N8M0 369 aa5.36□□□□□ -1.55
HMGB3P12-201ENST00000438745 BVESQ8NE79 360 aa5.36□□□□□ -1.55
HMGB3P12-201ENST00000438745 SGPP1Q9BX95 441 aa5.36□□□□□ -1.55
HMGB3P12-201ENST00000438745 KRTAP4-2Q9BYR5 136 aa5.36□□□□□ -1.55
HMGB3P12-201ENST00000438745 PDLIM7Q9NR12 457 aa5.36□□□□□ -1.55
HMGB3P12-201ENST00000438745 AKT3Q9Y243 479 aa5.36□□□□□ -1.55
HMGB3P12-201ENST00000438745 BACE2Q9Y5Z0 518 aa5.36□□□□□ -1.55
HMGB3P12-201ENST00000438745 IRS2Q9Y4H2 1338 aa5.36□□□□□ -1.55
HMGB3P12-201ENST00000438745 CC2D2AQ9P2K1 1620 aa5.36□□□□□ -1.55
HMGB3P12-201ENST00000438745 SRGAP3O43295 1099 aa5.35□□□□□ -1.55
HMGB3P12-201ENST00000438745 PPP1R11O60927 126 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P12-201ENST00000438745 L1CAMP32004 1257 aa5.35□□□□□ -1.55
HMGB3P12-201ENST00000438745 CYP4F3Q08477 520 aa5.35□□□□□ -1.55
HMGB3P12-201ENST00000438745 NR1I3Q14994 352 aa5.35□□□□□ -1.55
HMGB3P12-201ENST00000438745 LCNL1Q6ZST4 164 aa5.35□□□□□ -1.55
HMGB3P12-201ENST00000438745 JAMLQ86YT9 394 aa5.35□□□□□ -1.55
HMGB3P12-201ENST00000438745 LRRC56Q8IYG6 542 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P12-201ENST00000438745 ZSCAN18Q8TBC5 510 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P12-201ENST00000438745 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMGB3P12-201ENST00000438745 ZNF408Q9H9D4 720 aa5.35□□□□□ -1.55
HMGB3P12-201ENST00000438745 ACTR10Q9NZ32 417 aa5.35□□□□□ -1.55
HMGB3P12-201ENST00000438745 IRS4O14654 1257 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P12-201ENST00000438745 N4BP3O15049 544 aa5.34□□□□□ -1.55
HMGB3P12-201ENST00000438745 NAT2P11245 290 aa5.34□□□□□ -1.55
HMGB3P12-201ENST00000438745 LINC00310P59036 64 aa5.34□□□□□ -1.55
HMGB3P12-201ENST00000438745 TMEM62Q0P6H9 643 aa5.34□□□□□ -1.55
HMGB3P12-201ENST00000438745 DPY19L1Q2PZI1 675 aa5.34□□□□□ -1.55
HMGB3P12-201ENST00000438745 TMEM132EQ6IEE7 984 aa5.34□□□□□ -1.55
HMGB3P12-201ENST00000438745 POMZP3Q6PJE2 187 aa5.34□□□□□ -1.55
HMGB3P12-201ENST00000438745 C6orf15Q6UXA7 325 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P12-201ENST00000438745 TRIM59Q8IWR1 403 aa5.34□□□□□ -1.55
HMGB3P12-201ENST00000438745 FAM178BQ8IXR5 827 aa5.34□□□□□ -1.55
HMGB3P12-201ENST00000438745 MICAL1Q8TDZ2 1067 aa5.34□□□□□ -1.55
HMGB3P12-201ENST00000438745 CYP26B1Q9NR63 512 aa5.34□□□□□ -1.55
HMGB3P12-201ENST00000438745 SIRT5Q9NXA8 310 aa5.34□□□□□ -1.55
HMGB3P12-201ENST00000438745 SUGT1Q9Y2Z0 365 aa5.34□□□□□ -1.55
HMGB3P12-201ENST00000438745 STXBP3O00186 592 aa5.33□□□□□ -1.56
HMGB3P12-201ENST00000438745 CYBBP04839 570 aa5.33□□□□□ -1.56
HMGB3P12-201ENST00000438745 DBHP09172 617 aa5.33□□□□□ -1.56
HMGB3P12-201ENST00000438745 RANGAP1P46060 587 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P12-201ENST00000438745 MAPKAPK2P49137 400 aa5.33□□□□□ -1.56
HMGB3P12-201ENST00000438745 SEPHS1P49903 392 aa5.33□□□□□ -1.56
HMGB3P12-201ENST00000438745 RAB3GAP1Q15042 981 aa5.33□□□□□ -1.56
HMGB3P12-201ENST00000438745 OLFML2BQ68BL8 750 aa5.33□□□□□ -1.56
HMGB3P12-201ENST00000438745 PAQR3Q6TCH7 311 aa5.33□□□□□ -1.56
HMGB3P12-201ENST00000438745 RPTNQ6XPR3 784 aa5.33□□□□□ -1.56
HMGB3P12-201ENST00000438745 LDHDQ86WU2 507 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms