RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 USP15Q9Y4E8 981 aaPredicted RBP13.83□□□□□ -0.2
RTN4-211ENST00000438462 GRM8O00222 908 aa13.82□□□□□ -0.2
RTN4-211ENST00000438462 TMEM132BQ14DG7 1078 aa13.82□□□□□ -0.2
RTN4-211ENST00000438462 FSCN1Q16658 493 aaKnown RBP13.82□□□□□ -0.2
RTN4-211ENST00000438462 MAMDC4Q6UXC1 1216 aa13.82□□□□□ -0.2
RTN4-211ENST00000438462 CCDC105Q8IYK2 499 aa13.82□□□□□ -0.2
RTN4-211ENST00000438462 KLHDC4Q8TBB5 520 aa13.82□□□□□ -0.2
RTN4-211ENST00000438462 RTKNQ9BST9 563 aa13.82□□□□□ -0.2
RTN4-211ENST00000438462 MFSD1Q9H3U5 465 aa13.82□□□□□ -0.2
RTN4-211ENST00000438462 INSL6Q9Y581 213 aa13.82□□□□□ -0.2
RTN4-211ENST00000438462 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.81□□□□□ -0.2
RTN4-211ENST00000438462 CSPG5O95196 566 aa13.81□□□□□ -0.2
RTN4-211ENST00000438462 MAP4K4O95819 1239 aaPredicted RBP13.81□□□□□ -0.2
RTN4-211ENST00000438462 PTGS1P23219 599 aa13.81□□□□□ -0.2
RTN4-211ENST00000438462 PHKA1P46020 1223 aa13.81□□□□□ -0.2
RTN4-211ENST00000438462 CLCN5P51795 746 aa13.81□□□□□ -0.2
RTN4-211ENST00000438462 PPM1JQ5JR12 505 aa13.81□□□□□ -0.2
RTN4-211ENST00000438462 CWF19L1Q69YN2 538 aaKnown RBP13.81□□□□□ -0.2
RTN4-211ENST00000438462 TLK2Q86UE8 772 aa13.81□□□□□ -0.2
RTN4-211ENST00000438462 LURAP1LQ8IV03 231 aa13.81□□□□□ -0.2
RTN4-211ENST00000438462 KREMEN2Q8NCW0 462 aa13.81□□□□□ -0.2
RTN4-211ENST00000438462 MICAL3Q7RTP6 2002 aa13.8□□□□□ -0.2
RTN4-211ENST00000438462 SEMA3EO15041 775 aa13.8□□□□□ -0.2
RTN4-211ENST00000438462 ARP10275 920 aa13.8□□□□□ -0.2
RTN4-211ENST00000438462 TRIM26Q12899 539 aaPredicted RBP13.8□□□□□ -0.2
RTN4-211ENST00000438462 TCTN1Q2MV58 587 aa13.8□□□□□ -0.2
RTN4-211ENST00000438462 CNKSR3Q6P9H4 555 aa13.8□□□□□ -0.2
RTN4-211ENST00000438462 NOL8Q76FK4 1167 aaKnown RBP13.8□□□□□ -0.2
RTN4-211ENST00000438462 FBXO11Q86XK2 927 aa13.8□□□□□ -0.2
RTN4-211ENST00000438462 FOXP4Q8IVH2 680 aaPredicted RBP13.8□□□□□ -0.2
RTN4-211ENST00000438462 SP7Q8TDD2 431 aaPredicted RBP13.8□□□□□ -0.2
RTN4-211ENST00000438462 SUCLG2Q96I99 432 aa13.8□□□□□ -0.2
RTN4-211ENST00000438462 ABHD16BQ9H3Z7 469 aa13.8□□□□□ -0.2
RTN4-211ENST00000438462 IFT57Q9NWB7 429 aa13.8□□□□□ -0.2
RTN4-211ENST00000438462 ANGPTL2Q9UKU9 493 aa13.8□□□□□ -0.2
RTN4-211ENST00000438462 RBAK-RBAKDNI3L0D1 243 aa13.79□□□□□ -0.2
RTN4-211ENST00000438462 ZEB2O60315 1214 aa13.79□□□□□ -0.2
RTN4-211ENST00000438462 FLOT1O75955 427 aa13.79□□□□□ -0.2
RTN4-211ENST00000438462 BRD1O95696 1058 aa13.79□□□□□ -0.2
RTN4-211ENST00000438462 ADAM15Q13444 863 aa13.79□□□□□ -0.2
RTN4-211ENST00000438462 MTMR3Q13615 1198 aa13.79□□□□□ -0.2
RTN4-211ENST00000438462 BEND3Q5T5X7 828 aa13.79□□□□□ -0.2
RTN4-211ENST00000438462 RIOX2Q8IUF8 465 aa13.79□□□□□ -0.2
RTN4-211ENST00000438462 TMEM192Q8IY95 271 aa13.79□□□□□ -0.2
RTN4-211ENST00000438462 SH3RF3Q8TEJ3 882 aaPredicted RBP13.79□□□□□ -0.2
RTN4-211ENST00000438462 KAZALD1Q96I82 304 aa13.79□□□□□ -0.2
RTN4-211ENST00000438462 SMOC2Q9H3U7 446 aa13.79□□□□□ -0.2
RTN4-211ENST00000438462 CLEC1BQ9P126 229 aa13.79□□□□□ -0.2
RTN4-211ENST00000438462 PALD1Q9ULE6 856 aa13.79□□□□□ -0.2
RTN4-211ENST00000438462 TRIP12Q14669 1992 aaPredicted RBP13.79□□□□□ -0.2
RTN4-211ENST00000438462 FANCMQ8IYD8 2048 aa13.79□□□□□ -0.2
RTN4-211ENST00000438462 TNFAIP2Q03169 654 aa13.78□□□□□ -0.2
RTN4-211ENST00000438462 COASYQ13057 564 aa13.78□□□□□ -0.2
RTN4-211ENST00000438462 SPTY2D1Q68D10 685 aaPredicted RBP13.78□□□□□ -0.2
RTN4-211ENST00000438462 MAPKAPK5Q8IW41 473 aa13.78□□□□□ -0.2
RTN4-211ENST00000438462 UBALD2Q8IYN6 164 aa13.78□□□□□ -0.2
RTN4-211ENST00000438462 FLCNQ8NFG4 579 aa13.78□□□□□ -0.2
RTN4-211ENST00000438462 ZMIZ1Q9ULJ6 1067 aa13.78□□□□□ -0.2
RTN4-211ENST00000438462 FLT1P17948 1338 aa13.78□□□□□ -0.2
RTN4-211ENST00000438462 PROS1P07225 676 aa13.77□□□□□ -0.21
RTN4-211ENST00000438462 GNAI1P63096 354 aa13.77□□□□□ -0.21
RTN4-211ENST00000438462 HTRA4P83105 476 aaPredicted RBP13.77□□□□□ -0.21
RTN4-211ENST00000438462 BFSP2Q13515 415 aa13.77□□□□□ -0.21
RTN4-211ENST00000438462 GPNMBQ14956 572 aa13.77□□□□□ -0.21
RTN4-211ENST00000438462 LRRFIP1Q32MZ4 808 aaKnown RBP13.77□□□□□ -0.21
RTN4-211ENST00000438462 FAM47CQ5HY64 1035 aa13.77□□□□□ -0.21
RTN4-211ENST00000438462 ERICH6Q7L0X2 663 aa13.77□□□□□ -0.21
RTN4-211ENST00000438462 NAV2Q8IVL1 2488 aa13.77□□□□□ -0.21
RTN4-211ENST00000438462 DTWD2Q8NBA8 298 aa13.77□□□□□ -0.21
RTN4-211ENST00000438462 KATNBL1Q9H079 304 aa13.77□□□□□ -0.21
RTN4-211ENST00000438462 C9orf78Q9NZ63 289 aaPredicted RBP13.77□□□□□ -0.21
RTN4-211ENST00000438462 SORCS3Q9UPU3 1222 aa13.77□□□□□ -0.21
RTN4-211ENST00000438462 GNEQ9Y223 722 aaKnown RBP13.77□□□□□ -0.21
RTN4-211ENST00000438462 COL4A3Q01955 1670 aa13.76□□□□□ -0.21
RTN4-211ENST00000438462 ABHD14A-ACY1A0A1B0GW23 586 aa13.76□□□□□ -0.21
RTN4-211ENST00000438462 PRR5-ARHGAP8B1AHC4 643 aa13.76□□□□□ -0.21
RTN4-211ENST00000438462 F6X3S4 739 aa13.76□□□□□ -0.21
RTN4-211ENST00000438462 PI15O43692 258 aa13.76□□□□□ -0.21
RTN4-211ENST00000438462 SP100P23497 879 aaPredicted RBP13.76□□□□□ -0.21
RTN4-211ENST00000438462 ARHGAP8P85298 464 aa13.76□□□□□ -0.21
RTN4-211ENST00000438462 RASGRF1Q13972 1273 aa13.76□□□□□ -0.21
RTN4-211ENST00000438462 LRSAM1Q6UWE0 723 aa13.76□□□□□ -0.21
RTN4-211ENST00000438462 ARMCX2Q7L311 632 aa13.76□□□□□ -0.21
RTN4-211ENST00000438462 ZNF467Q7Z7K2 595 aaPredicted RBP13.76□□□□□ -0.21
RTN4-211ENST00000438462 PPP1R13LQ8WUF5 828 aa13.76□□□□□ -0.21
RTN4-211ENST00000438462 AP5M1Q9H0R1 490 aa13.76□□□□□ -0.21
RTN4-211ENST00000438462 BARX2Q9UMQ3 279 aaPredicted RBP13.76□□□□□ -0.21
RTN4-211ENST00000438462 AOC1P19801 751 aa13.75□□□□□ -0.21
RTN4-211ENST00000438462 LMNB2Q03252 620 aa13.75□□□□□ -0.21
RTN4-211ENST00000438462 KIAA1755Q5JYT7 1200 aa13.75□□□□□ -0.21
RTN4-211ENST00000438462 TATDN1Q6P1N9 297 aa13.75□□□□□ -0.21
RTN4-211ENST00000438462 ZC3H14Q6PJT7 736 aaKnown RBP13.75□□□□□ -0.21
RTN4-211ENST00000438462 TGFBRAP1Q8WUH2 860 aa13.75□□□□□ -0.21
RTN4-211ENST00000438462 BICC1Q9H694 974 aaKnown RBP13.75□□□□□ -0.21
RTN4-211ENST00000438462 SAP30BPQ9UHR5 308 aaKnown RBP13.75□□□□□ -0.21
RTN4-211ENST00000438462 DNAJC25-GNG10A0A024R161 153 aa13.74□□□□□ -0.21
RTN4-211ENST00000438462 A0A1W2PRG0 241 aa13.74□□□□□ -0.21
RTN4-211ENST00000438462 GRM6O15303 877 aa13.74□□□□□ -0.21
RTN4-211ENST00000438462 DYNC1LI2O43237 492 aaPredicted RBP13.74□□□□□ -0.21
RTN4-211ENST00000438462 EFCAB14O75071 495 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms