RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 PSMC6P62333 389 aa16.8■□□□□ 0.28
LINC01088-201ENST00000437737 UBE3CQ15386 1083 aa16.8■□□□□ 0.28
LINC01088-201ENST00000437737 TMEM67Q5HYA8 995 aa16.8■□□□□ 0.28
LINC01088-201ENST00000437737 TMEM31Q5JXX7 168 aa16.8■□□□□ 0.28
LINC01088-201ENST00000437737 ACAD9Q9H845 621 aa16.8■□□□□ 0.28
LINC01088-201ENST00000437737 FEM1BQ9UK73 627 aa16.8■□□□□ 0.28
LINC01088-201ENST00000437737 ISY1Q9ULR0 285 aaKnown RBP16.8■□□□□ 0.28
LINC01088-201ENST00000437737 GNEQ9Y223 722 aaKnown RBP16.8■□□□□ 0.28
LINC01088-201ENST00000437737 ARIH1Q9Y4X5 557 aaPredicted RBP16.8■□□□□ 0.28
LINC01088-201ENST00000437737 MTCH2Q9Y6C9 303 aa16.8■□□□□ 0.28
LINC01088-201ENST00000437737 SCN5AQ14524 2016 aa16.79■□□□□ 0.28
LINC01088-201ENST00000437737 GRIN2DO15399 1336 aa16.79■□□□□ 0.28
LINC01088-201ENST00000437737 ASB14A6NK59 587 aa16.79■□□□□ 0.28
LINC01088-201ENST00000437737 DYNC1LI2O43237 492 aaPredicted RBP16.79■□□□□ 0.28
LINC01088-201ENST00000437737 FAM133AQ8N9E0 248 aa16.79■□□□□ 0.28
LINC01088-201ENST00000437737 COG5Q9UP83 839 aa16.79■□□□□ 0.28
LINC01088-201ENST00000437737 COG6Q9Y2V7 657 aa16.79■□□□□ 0.28
LINC01088-201ENST00000437737 REV3LO60673 3130 aa16.78■□□□□ 0.28
LINC01088-201ENST00000437737 MINDY4BA8MYZ0 360 aa16.78■□□□□ 0.28
LINC01088-201ENST00000437737 PFKMP08237 780 aa16.78■□□□□ 0.28
LINC01088-201ENST00000437737 SMPD1P17405 629 aa16.78■□□□□ 0.28
LINC01088-201ENST00000437737 PTGS1P23219 599 aa16.78■□□□□ 0.28
LINC01088-201ENST00000437737 TTLL4Q14679 1199 aa16.78■□□□□ 0.28
LINC01088-201ENST00000437737 ZSCAN25Q6NSZ9 544 aa16.78■□□□□ 0.28
LINC01088-201ENST00000437737 DEFB128Q7Z7B8 93 aa16.78■□□□□ 0.28
LINC01088-201ENST00000437737 PUS7LQ9H0K6 701 aaKnown RBP16.78■□□□□ 0.28
LINC01088-201ENST00000437737 ACTN1P12814 892 aa16.77■□□□□ 0.28
LINC01088-201ENST00000437737 ATP5JP18859 108 aa16.77■□□□□ 0.28
LINC01088-201ENST00000437737 POU3F3P20264 500 aaPredicted RBP16.77■□□□□ 0.28
LINC01088-201ENST00000437737 EEPD1Q7L9B9 569 aa16.77■□□□□ 0.28
LINC01088-201ENST00000437737 LRRC47Q8N1G4 583 aaKnown RBP16.77■□□□□ 0.28
LINC01088-201ENST00000437737 AGBL1Q96MI9 1066 aa16.77■□□□□ 0.28
LINC01088-201ENST00000437737 HAUS7Q99871 368 aa16.77■□□□□ 0.28
LINC01088-201ENST00000437737 ALDH8A1Q9H2A2 487 aaPredicted RBP16.77■□□□□ 0.28
LINC01088-201ENST00000437737 A1CFQ9NQ94 594 aaKnown RBP16.77■□□□□ 0.28
LINC01088-201ENST00000437737 RNF146Q9NTX7 359 aa16.77■□□□□ 0.28
LINC01088-201ENST00000437737 SOWAHBA6NEL2 793 aa16.76■□□□□ 0.27
LINC01088-201ENST00000437737 CYP2C9P11712 490 aa16.76■□□□□ 0.27
LINC01088-201ENST00000437737 BMP3P12645 472 aa16.76■□□□□ 0.27
LINC01088-201ENST00000437737 SBK1Q52WX2 424 aa16.76■□□□□ 0.27
LINC01088-201ENST00000437737 KRT40Q6A162 431 aa16.76■□□□□ 0.27
LINC01088-201ENST00000437737 FBXO16Q8IX29 292 aaPredicted RBP16.76■□□□□ 0.27
LINC01088-201ENST00000437737 ZNF444Q8N0Y2 327 aaPredicted RBP16.76■□□□□ 0.27
LINC01088-201ENST00000437737 ARNTL2Q8WYA1 636 aa16.76■□□□□ 0.27
LINC01088-201ENST00000437737 SLC9A7Q96T83 725 aa16.76■□□□□ 0.27
LINC01088-201ENST00000437737 CHMP4BQ9H444 224 aaKnown RBP16.76■□□□□ 0.27
LINC01088-201ENST00000437737 PDGFCQ9NRA1 345 aa16.76■□□□□ 0.27
LINC01088-201ENST00000437737 TRMT13Q9NUP7 481 aaKnown RBP16.76■□□□□ 0.27
LINC01088-201ENST00000437737 GTF3C3Q9Y5Q9 886 aa16.76■□□□□ 0.27
LINC01088-201ENST00000437737 XIRP2A4UGR9 3374 aa16.75■□□□□ 0.27
LINC01088-201ENST00000437737 IGKV6D-41A0A0C4DH26 115 aa16.75■□□□□ 0.27
LINC01088-201ENST00000437737 EPOPA6NHQ4 379 aa16.75■□□□□ 0.27
LINC01088-201ENST00000437737 TMEM232C9JQI7 657 aa16.75■□□□□ 0.27
LINC01088-201ENST00000437737 TLL1O43897 1013 aa16.75■□□□□ 0.27
LINC01088-201ENST00000437737 SUPT20HL2P0C7V6 817 aa16.75■□□□□ 0.27
LINC01088-201ENST00000437737 FDX1P10109 184 aa16.75■□□□□ 0.27
LINC01088-201ENST00000437737 IKQ13123 557 aaPredicted RBP16.75■□□□□ 0.27
LINC01088-201ENST00000437737 AAMPQ13685 434 aa16.75■□□□□ 0.27
LINC01088-201ENST00000437737 SLFN13Q68D06 897 aa16.75■□□□□ 0.27
LINC01088-201ENST00000437737 IQSEC1Q6DN90 963 aa16.75■□□□□ 0.27
LINC01088-201ENST00000437737 GMCL1P1Q8NEA9 526 aa16.75■□□□□ 0.27
LINC01088-201ENST00000437737 HLA-CQ95604 372 aa16.75■□□□□ 0.27
LINC01088-201ENST00000437737 VWCEQ96DN2 955 aa16.75■□□□□ 0.27
LINC01088-201ENST00000437737 CEP95Q96GE4 821 aa16.75■□□□□ 0.27
LINC01088-201ENST00000437737 Q9Y3F1 56 aa16.75■□□□□ 0.27
LINC01088-201ENST00000437737 DDX49Q9Y6V7 483 aaKnown RBP16.75■□□□□ 0.27
LINC01088-201ENST00000437737 COL4A4P53420 1690 aaPredicted RBP16.75■□□□□ 0.27
LINC01088-201ENST00000437737 TNKSO95271 1327 aa16.74■□□□□ 0.27
LINC01088-201ENST00000437737 TANC1Q9C0D5 1861 aa16.74■□□□□ 0.27
LINC01088-201ENST00000437737 KIF28PB7ZC32 967 aa16.74■□□□□ 0.27
LINC01088-201ENST00000437737 HMMRO75330 724 aa16.74■□□□□ 0.27
LINC01088-201ENST00000437737 PRDM1O75626 825 aa16.74■□□□□ 0.27
LINC01088-201ENST00000437737 TTLL1O95922 423 aa16.74■□□□□ 0.27
LINC01088-201ENST00000437737 ALAS1P13196 640 aa16.74■□□□□ 0.27
LINC01088-201ENST00000437737 STAT2P52630 851 aa16.74■□□□□ 0.27
LINC01088-201ENST00000437737 KIAA1211Q6ZU35 1233 aa16.74■□□□□ 0.27
LINC01088-201ENST00000437737 MKL1Q969V6 931 aa16.74■□□□□ 0.27
LINC01088-201ENST00000437737 TRERF1Q96PN7 1200 aa16.74■□□□□ 0.27
LINC01088-201ENST00000437737 STRBPQ96SI9 672 aaKnown RBP16.74■□□□□ 0.27
LINC01088-201ENST00000437737 ZNF287Q9HBT7 754 aa16.74■□□□□ 0.27
LINC01088-201ENST00000437737 SYNPO2Q9UMS6 1093 aa16.74■□□□□ 0.27
LINC01088-201ENST00000437737 LCTP09848 1927 aa16.73■□□□□ 0.27
LINC01088-201ENST00000437737 FAM86C2PA6NEL3 165 aa16.73■□□□□ 0.27
LINC01088-201ENST00000437737 RAB11FIP3O75154 756 aa16.73■□□□□ 0.27
LINC01088-201ENST00000437737 TKFCQ3LXA3 575 aa16.73■□□□□ 0.27
LINC01088-201ENST00000437737 TMEM63BQ5T3F8 832 aa16.73■□□□□ 0.27
LINC01088-201ENST00000437737 TAPT1Q6NXT6 567 aa16.73■□□□□ 0.27
LINC01088-201ENST00000437737 RPAP2Q8IXW5 612 aaPredicted RBP16.73■□□□□ 0.27
LINC01088-201ENST00000437737 PANK1Q8TE04 598 aa16.73■□□□□ 0.27
LINC01088-201ENST00000437737 POLR3EQ9NVU0 708 aa16.73■□□□□ 0.27
LINC01088-201ENST00000437737 MTMR4Q9NYA4 1195 aa16.73■□□□□ 0.27
LINC01088-201ENST00000437737 TRANK1O15050 2925 aa16.72■□□□□ 0.27
LINC01088-201ENST00000437737 GSG1L2A8MUP6 293 aa16.72■□□□□ 0.27
LINC01088-201ENST00000437737 GPR37L1O60883 481 aa16.72■□□□□ 0.27
LINC01088-201ENST00000437737 MYL3P08590 195 aa16.72■□□□□ 0.27
LINC01088-201ENST00000437737 RFC2P35250 354 aa16.72■□□□□ 0.27
LINC01088-201ENST00000437737 TDO2P48775 406 aa16.72■□□□□ 0.27
LINC01088-201ENST00000437737 TAP1Q03518 808 aa16.72■□□□□ 0.27
LINC01088-201ENST00000437737 FAM47CQ5HY64 1035 aa16.72■□□□□ 0.27
LINC01088-201ENST00000437737 GIMAP6Q6P9H5 292 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms