RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 FAN1Q9Y2M0 1017 aa5.86□□□□□ -1.47
HMGB1P31-201ENST00000437242 FGF10O15520 208 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P31-201ENST00000437242 SLURP1P55000 103 aa5.85□□□□□ -1.47
HMGB1P31-201ENST00000437242 KRTAP10-2P60368 255 aa5.85□□□□□ -1.47
HMGB1P31-201ENST00000437242 NFKB2Q00653 900 aa5.85□□□□□ -1.47
HMGB1P31-201ENST00000437242 DCAF15Q66K64 600 aa5.85□□□□□ -1.47
HMGB1P31-201ENST00000437242 FERD3LQ96RJ6 166 aa5.85□□□□□ -1.47
HMGB1P31-201ENST00000437242 SRRTQ9BXP5 876 aaKnown RBP5.85□□□□□ -1.47
HMGB1P31-201ENST00000437242 GP6Q9HCN6 339 aa5.85□□□□□ -1.47
HMGB1P31-201ENST00000437242 PDLIM7Q9NR12 457 aa5.85□□□□□ -1.47
HMGB1P31-201ENST00000437242 SUSD2Q9UGT4 822 aa5.85□□□□□ -1.47
HMGB1P31-201ENST00000437242 DBR1Q9UK59 544 aaKnown RBP5.85□□□□□ -1.47
HMGB1P31-201ENST00000437242 TACR1P25103 407 aa5.84□□□□□ -1.47
HMGB1P31-201ENST00000437242 NOP2P46087 812 aaKnown RBP5.84□□□□□ -1.47
HMGB1P31-201ENST00000437242 CORO7P57737 925 aa5.84□□□□□ -1.47
HMGB1P31-201ENST00000437242 ZNF445P59923 1031 aa5.84□□□□□ -1.47
HMGB1P31-201ENST00000437242 PLP2Q04941 152 aa5.84□□□□□ -1.47
HMGB1P31-201ENST00000437242 SPATS1Q496A3 300 aa5.84□□□□□ -1.47
HMGB1P31-201ENST00000437242 PPFIBP1Q86W92 1011 aa5.84□□□□□ -1.47
HMGB1P31-201ENST00000437242 LSRQ86X29 649 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P31-201ENST00000437242 FIBCD1Q8N539 461 aa5.84□□□□□ -1.47
HMGB1P31-201ENST00000437242 TAB3Q8N5C8 712 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P31-201ENST00000437242 RGS22Q8NE09 1264 aa5.84□□□□□ -1.47
HMGB1P31-201ENST00000437242 BRF1Q92994 677 aa5.84□□□□□ -1.47
HMGB1P31-201ENST00000437242 TM9SF2Q99805 663 aa5.84□□□□□ -1.47
HMGB1P31-201ENST00000437242 FAM86C1Q9NVL1 165 aa5.84□□□□□ -1.47
HMGB1P31-201ENST00000437242 SF3B6Q9Y3B4 125 aaKnown RBP5.84□□□□□ -1.47
HMGB1P31-201ENST00000437242 HCFC2Q9Y5Z7 792 aa5.84□□□□□ -1.47
HMGB1P31-201ENST00000437242 FHOD1Q9Y613 1164 aa5.84□□□□□ -1.47
HMGB1P31-201ENST00000437242 PMF1-BGLAPU3KQ54 211 aa5.84□□□□□ -1.47
HMGB1P31-201ENST00000437242 TP53P04637 393 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P31-201ENST00000437242 CD3EP07766 207 aa5.83□□□□□ -1.48
HMGB1P31-201ENST00000437242 ITGA4P13612 1032 aa5.83□□□□□ -1.48
HMGB1P31-201ENST00000437242 FBLN1P23142 703 aa5.83□□□□□ -1.48
HMGB1P31-201ENST00000437242 RTP5Q14D33 572 aa5.83□□□□□ -1.48
HMGB1P31-201ENST00000437242 AXDND1Q5T1B0 1012 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P31-201ENST00000437242 PTCHD1Q96NR3 888 aa5.83□□□□□ -1.48
HMGB1P31-201ENST00000437242 RNF38Q9H0F5 515 aa5.83□□□□□ -1.48
HMGB1P31-201ENST00000437242 USP40Q9NVE5 1235 aa5.83□□□□□ -1.48
HMGB1P31-201ENST00000437242 F8W031 263 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P31-201ENST00000437242 TBC1D8O95759 1140 aa5.82□□□□□ -1.48
HMGB1P31-201ENST00000437242 PLA2G1BP04054 148 aaKnown RBP5.82□□□□□ -1.48
HMGB1P31-201ENST00000437242 FOXO4P98177 505 aa5.82□□□□□ -1.48
HMGB1P31-201ENST00000437242 POU4F1Q01851 419 aa5.82□□□□□ -1.48
HMGB1P31-201ENST00000437242 EFEMP1Q12805 493 aa5.82□□□□□ -1.48
HMGB1P31-201ENST00000437242 VWA3BQ502W6 1294 aa5.82□□□□□ -1.48
HMGB1P31-201ENST00000437242 ANKRD39Q53RE8 183 aa5.82□□□□□ -1.48
HMGB1P31-201ENST00000437242 FBXW10Q5XX13 1052 aa5.82□□□□□ -1.48
HMGB1P31-201ENST00000437242 LIPIQ6XZB0 460 aa5.82□□□□□ -1.48
HMGB1P31-201ENST00000437242 GGNQ86UU5 652 aa5.82□□□□□ -1.48
HMGB1P31-201ENST00000437242 USP48Q86UV5 1035 aa5.82□□□□□ -1.48
HMGB1P31-201ENST00000437242 TMEM87AQ8NBN3 555 aa5.82□□□□□ -1.48
HMGB1P31-201ENST00000437242 FNIP1Q8TF40 1166 aa5.82□□□□□ -1.48
HMGB1P31-201ENST00000437242 ZDHHC15Q96MV8 337 aa5.82□□□□□ -1.48
HMGB1P31-201ENST00000437242 GZF1Q9H116 711 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P31-201ENST00000437242 NOL6Q9H6R4 1146 aaKnown RBP5.82□□□□□ -1.48
HMGB1P31-201ENST00000437242 PRICKLE3O43900 615 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P31-201ENST00000437242 IFNGR1P15260 489 aa5.81□□□□□ -1.48
HMGB1P31-201ENST00000437242 ATF2P15336 505 aa5.81□□□□□ -1.48
HMGB1P31-201ENST00000437242 CD247P20963 164 aa5.81□□□□□ -1.48
HMGB1P31-201ENST00000437242 L1CAMP32004 1257 aa5.81□□□□□ -1.48
HMGB1P31-201ENST00000437242 PRR5P85299 388 aa5.81□□□□□ -1.48
HMGB1P31-201ENST00000437242 UBXN11Q5T124 520 aa5.81□□□□□ -1.48
HMGB1P31-201ENST00000437242 NT5DC1Q5TFE4 455 aa5.81□□□□□ -1.48
HMGB1P31-201ENST00000437242 CABP7Q86V35 215 aa5.81□□□□□ -1.48
HMGB1P31-201ENST00000437242 ADGRG2Q8IZP9 1017 aa5.81□□□□□ -1.48
HMGB1P31-201ENST00000437242 ALG3Q92685 438 aa5.81□□□□□ -1.48
HMGB1P31-201ENST00000437242 RNF34Q969K3 372 aa5.81□□□□□ -1.48
HMGB1P31-201ENST00000437242 FCRL3Q96P31 734 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P31-201ENST00000437242 SPATA25Q9BR10 227 aa5.81□□□□□ -1.48
HMGB1P31-201ENST00000437242 PLA2G2DQ9UNK4 145 aa5.81□□□□□ -1.48
HMGB1P31-201ENST00000437242 A0A1B0GTL3 188 aa5.8□□□□□ -1.48
HMGB1P31-201ENST00000437242 NCAM1P13591 858 aa5.8□□□□□ -1.48
HMGB1P31-201ENST00000437242 GUCY2CP25092 1073 aa5.8□□□□□ -1.48
HMGB1P31-201ENST00000437242 ZNF76P36508 570 aa5.8□□□□□ -1.48
HMGB1P31-201ENST00000437242 TCEAL1Q15170 157 aa5.8□□□□□ -1.48
HMGB1P31-201ENST00000437242 ZYXQ15942 572 aaKnown RBP5.8□□□□□ -1.48
HMGB1P31-201ENST00000437242 UNC5AQ6ZN44 842 aa5.8□□□□□ -1.48
HMGB1P31-201ENST00000437242 SAPCD2Q86UD0 394 aa5.8□□□□□ -1.48
HMGB1P31-201ENST00000437242 ZNF451Q9Y4E5 1061 aa5.8□□□□□ -1.48
HMGB1P31-201ENST00000437242 K7ESM1 405 aa5.79□□□□□ -1.48
HMGB1P31-201ENST00000437242 ASGR2P07307 311 aa5.79□□□□□ -1.48
HMGB1P31-201ENST00000437242 MC3RP41968 323 aa5.79□□□□□ -1.48
HMGB1P31-201ENST00000437242 HTRA3P83110 453 aa5.79□□□□□ -1.48
HMGB1P31-201ENST00000437242 PPP2R5DQ14738 602 aa5.79□□□□□ -1.48
HMGB1P31-201ENST00000437242 ZFYVE27Q5T4F4 411 aa5.79□□□□□ -1.48
HMGB1P31-201ENST00000437242 SH3D21A4FU49 640 aa5.78□□□□□ -1.48
HMGB1P31-201ENST00000437242 GLI4P10075 376 aa5.78□□□□□ -1.48
HMGB1P31-201ENST00000437242 RCSD1Q6JBY9 416 aa5.78□□□□□ -1.48
HMGB1P31-201ENST00000437242 RUFY4Q6ZNE9 571 aa5.78□□□□□ -1.48
HMGB1P31-201ENST00000437242 B3GNT8Q7Z7M8 397 aa5.78□□□□□ -1.48
HMGB1P31-201ENST00000437242 RBBP8NLQ8NC74 664 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P31-201ENST00000437242 NLGN2Q8NFZ4 835 aa5.78□□□□□ -1.48
HMGB1P31-201ENST00000437242 ZNF526Q8TF50 670 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P31-201ENST00000437242 CNOT11Q9UKZ1 510 aaKnown RBP5.78□□□□□ -1.48
HMGB1P31-201ENST00000437242 ZNF214Q9UL59 606 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P31-201ENST00000437242 PALD1Q9ULE6 856 aa5.78□□□□□ -1.48
HMGB1P31-201ENST00000437242 PPT2Q9UMR5 302 aa5.78□□□□□ -1.48
HMGB1P31-201ENST00000437242 A0A087WZG4 1122 aa5.77□□□□□ -1.49
HMGB1P31-201ENST00000437242 PMLP29590 882 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms