RNA–Protein interactions for RNA: ENST00000436673.5

UPP1-208, Transcript of uridine phosphorylase 1, human

TSL 5

Gene UPP1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UPP1-208	ENST00000436673	NMI	Q13287	307 aa	Predicted RBP	31.21	■■■□□ 2.59
UPP1-208	ENST00000436673	RRP12	Q5JTH9	1297 aa	Known RBP	31.21	■■■□□ 2.59
UPP1-208	ENST00000436673	RNPC3	Q96LT9	517 aa	Known RBP	31.21	■■■□□ 2.59
UPP1-208	ENST00000436673	RANBP17	Q9H2T7	1088 aa	Known RBP	31.21	■■■□□ 2.59
UPP1-208	ENST00000436673	TCP11L1	Q9NUJ3	509 aa		31.21	■■■□□ 2.59
UPP1-208	ENST00000436673	CCPG1	Q9ULG6	757 aa		31.21	■■■□□ 2.59
UPP1-208	ENST00000436673	ZMYM6	O95789	1325 aa		31.21	■■■□□ 2.59
UPP1-208	ENST00000436673	TIMP1	P01033	207 aa		31.2	■■■□□ 2.59
UPP1-208	ENST00000436673	ICAM1	P05362	532 aa		31.2	■■■□□ 2.59
UPP1-208	ENST00000436673	TOP1	P11387	765 aa	Known RBP	31.2	■■■□□ 2.59
UPP1-208	ENST00000436673	TTBK2	Q6IQ55	1244 aa		31.2	■■■□□ 2.59
UPP1-208	ENST00000436673	BTNL9	Q6UXG8	535 aa		31.2	■■■□□ 2.59
UPP1-208	ENST00000436673	VTI1A	Q96AJ9	217 aa		31.2	■■■□□ 2.59
UPP1-208	ENST00000436673	TMEM47	Q9BQJ4	181 aa		31.2	■■■□□ 2.59
UPP1-208	ENST00000436673	SEMA6B	Q9H3T3	888 aa		31.2	■■■□□ 2.59
UPP1-208	ENST00000436673		A0A0U1RQG5	324 aa	Predicted RBP	31.19	■■■□□ 2.58
UPP1-208	ENST00000436673	ARVCF	O00192	962 aa		31.19	■■■□□ 2.58
UPP1-208	ENST00000436673	SLC16A2	P36021	539 aa		31.19	■■■□□ 2.58
UPP1-208	ENST00000436673	GNE	Q9Y223	722 aa	Known RBP	31.19	■■■□□ 2.58
UPP1-208	ENST00000436673	DDX49	Q9Y6V7	483 aa	Known RBP	31.19	■■■□□ 2.58
UPP1-208	ENST00000436673	AAMP	Q13685	434 aa		31.18	■■■□□ 2.58
UPP1-208	ENST00000436673	NOL8	Q76FK4	1167 aa	Known RBP	31.18	■■■□□ 2.58
UPP1-208	ENST00000436673	CCDC171	Q6TFL3	1326 aa		31.18	■■■□□ 2.58
UPP1-208	ENST00000436673	TRIM6-TRIM34	B2RNG4	842 aa		31.17	■■■□□ 2.58
UPP1-208	ENST00000436673	BEX3	Q00994	111 aa		31.17	■■■□□ 2.58
UPP1-208	ENST00000436673	SYDE2	Q5VT97	1194 aa		31.17	■■■□□ 2.58
UPP1-208	ENST00000436673	NSMF	Q6X4W1	530 aa		31.17	■■■□□ 2.58
UPP1-208	ENST00000436673	SMC5	Q8IY18	1101 aa		31.17	■■■□□ 2.58
UPP1-208	ENST00000436673	CDX2	Q99626	313 aa	Predicted RBP	31.17	■■■□□ 2.58
UPP1-208	ENST00000436673	EYS	Q5T1H1	3165 aa		31.16	■■■□□ 2.58
UPP1-208	ENST00000436673	HAND2	P61296	217 aa		31.16	■■■□□ 2.58
UPP1-208	ENST00000436673	TLK2	Q86UE8	772 aa		31.16	■■■□□ 2.58
UPP1-208	ENST00000436673	FAM126B	Q8IXS8	530 aa		31.16	■■■□□ 2.58
UPP1-208	ENST00000436673	RILPL2	Q969X0	211 aa		31.16	■■■□□ 2.58
UPP1-208	ENST00000436673	TTYH1	Q9H313	450 aa	Predicted RBP	31.16	■■■□□ 2.58
UPP1-208	ENST00000436673	FRMPD2	Q68DX3	1309 aa	Predicted RBP	31.16	■■■□□ 2.58
UPP1-208	ENST00000436673	SMPD1	P17405	629 aa		31.15	■■■□□ 2.58
UPP1-208	ENST00000436673	MFSD5	Q6N075	450 aa		31.15	■■■□□ 2.58
UPP1-208	ENST00000436673	TAPT1	Q6NXT6	567 aa		31.15	■■■□□ 2.58
UPP1-208	ENST00000436673	MORC4	Q8TE76	937 aa		31.15	■■■□□ 2.58
UPP1-208	ENST00000436673	PURB	Q96QR8	312 aa	Known RBP	31.15	■■■□□ 2.58
UPP1-208	ENST00000436673	GPCPD1	Q9NPB8	672 aa		31.15	■■■□□ 2.58
UPP1-208	ENST00000436673	PDGFC	Q9NRA1	345 aa		31.15	■■■□□ 2.58
UPP1-208	ENST00000436673	CDH23	Q9H251	3354 aa		31.15	■■■□□ 2.58
UPP1-208	ENST00000436673	PC	P11498	1178 aa	Known RBP	31.14	■■■□□ 2.58
UPP1-208	ENST00000436673	PTGS1	P23219	599 aa		31.14	■■■□□ 2.58
UPP1-208	ENST00000436673	AKNAD1	Q5T1N1	836 aa		31.14	■■■□□ 2.58
UPP1-208	ENST00000436673	IQSEC1	Q6DN90	963 aa		31.14	■■■□□ 2.58
UPP1-208	ENST00000436673	EEPD1	Q7L9B9	569 aa		31.14	■■■□□ 2.58
UPP1-208	ENST00000436673	FBXO16	Q8IX29	292 aa	Predicted RBP	31.14	■■■□□ 2.58
UPP1-208	ENST00000436673	RWDD1	Q9H446	243 aa	Predicted RBP	31.14	■■■□□ 2.58
UPP1-208	ENST00000436673	LRRC37A2	A6NM11	1700 aa		31.14	■■■□□ 2.58
UPP1-208	ENST00000436673	PDHB	P11177	359 aa		31.13	■■■□□ 2.57
UPP1-208	ENST00000436673	FSCN1	Q16658	493 aa	Known RBP	31.13	■■■□□ 2.57
UPP1-208	ENST00000436673	B4GALNT3	Q6L9W6	998 aa		31.13	■■■□□ 2.57
UPP1-208	ENST00000436673	CXCL17	Q6UXB2	119 aa		31.13	■■■□□ 2.57
UPP1-208	ENST00000436673	TBC1D10C	Q8IV04	446 aa		31.13	■■■□□ 2.57
UPP1-208	ENST00000436673	TTC14	Q96N46	770 aa		31.13	■■■□□ 2.57
UPP1-208	ENST00000436673	AP5M1	Q9H0R1	490 aa		31.13	■■■□□ 2.57
UPP1-208	ENST00000436673	DYNC1LI2	O43237	492 aa	Predicted RBP	31.12	■■■□□ 2.57
UPP1-208	ENST00000436673	SDS	P20132	328 aa		31.12	■■■□□ 2.57
UPP1-208	ENST00000436673	BAAT	Q14032	418 aa	Predicted RBP	31.12	■■■□□ 2.57
UPP1-208	ENST00000436673	MFSD6	Q6ZSS7	791 aa		31.12	■■■□□ 2.57
UPP1-208	ENST00000436673	SLC43A3	Q8NBI5	491 aa		31.12	■■■□□ 2.57
UPP1-208	ENST00000436673	VTA1	Q9NP79	307 aa		31.12	■■■□□ 2.57
UPP1-208	ENST00000436673		Q9Y3F1	56 aa		31.12	■■■□□ 2.57
UPP1-208	ENST00000436673	CUL9	Q8IWT3	2517 aa		31.12	■■■□□ 2.57
UPP1-208	ENST00000436673	NFIB	O00712	420 aa		31.11	■■■□□ 2.57
UPP1-208	ENST00000436673	TLR3	O15455	904 aa	Known RBP	31.11	■■■□□ 2.57
UPP1-208	ENST00000436673	CABYR	O75952	493 aa		31.11	■■■□□ 2.57
UPP1-208	ENST00000436673	CD4	P01730	458 aa		31.11	■■■□□ 2.57
UPP1-208	ENST00000436673	MFAP1	P55081	439 aa	Known RBP	31.11	■■■□□ 2.57
UPP1-208	ENST00000436673	TMEM63B	Q5T3F8	832 aa		31.11	■■■□□ 2.57
UPP1-208	ENST00000436673	CHD1L	Q86WJ1	897 aa		31.11	■■■□□ 2.57
UPP1-208	ENST00000436673	PLEKHM2	Q8IWE5	1019 aa		31.11	■■■□□ 2.57
UPP1-208	ENST00000436673	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	31.11	■■■□□ 2.57
UPP1-208	ENST00000436673	TMEM265	A0A087WTH1	108 aa		31.1	■■■□□ 2.57
UPP1-208	ENST00000436673	ZNF543	Q08ER8	600 aa		31.1	■■■□□ 2.57
UPP1-208	ENST00000436673	PPIG	Q13427	754 aa	Known RBP eCLIP	31.1	■■■□□ 2.57
UPP1-208	ENST00000436673	OSBPL3	Q9H4L5	887 aa		31.1	■■■□□ 2.57
UPP1-208	ENST00000436673	LCT	P09848	1927 aa		31.1	■■■□□ 2.57
UPP1-208	ENST00000436673	IGHD	P01880	384 aa		31.09	■■■□□ 2.57
UPP1-208	ENST00000436673	SNHG28	P0DPA3	235 aa		31.09	■■■□□ 2.57
UPP1-208	ENST00000436673	ALDH5A1	P51649	535 aa	Predicted RBP	31.09	■■■□□ 2.57
UPP1-208	ENST00000436673	C16orf59	Q7L2K0	433 aa		31.09	■■■□□ 2.57
UPP1-208	ENST00000436673	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	31.09	■■■□□ 2.57
UPP1-208	ENST00000436673	CLEC4D	Q8WXI8	215 aa		31.09	■■■□□ 2.57
UPP1-208	ENST00000436673	RNF41	Q9H4P4	317 aa	Predicted RBP	31.09	■■■□□ 2.57
UPP1-208	ENST00000436673	ADD3	Q9UEY8	706 aa	Known RBP	31.09	■■■□□ 2.57
UPP1-208	ENST00000436673	GRIN2D	O15399	1336 aa		31.08	■■■□□ 2.57
UPP1-208	ENST00000436673	LOC102724159	A0A0B4J2E5	919 aa		31.08	■■■□□ 2.57
UPP1-208	ENST00000436673	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	31.08	■■■□□ 2.57
UPP1-208	ENST00000436673	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	31.08	■■■□□ 2.57
UPP1-208	ENST00000436673	ZEB2	O60315	1214 aa		31.08	■■■□□ 2.57
UPP1-208	ENST00000436673	CSF2RA	P15509	400 aa		31.08	■■■□□ 2.57
UPP1-208	ENST00000436673	NUCB1	Q02818	461 aa		31.08	■■■□□ 2.57
UPP1-208	ENST00000436673	ITGA7	Q13683	1181 aa		31.08	■■■□□ 2.57
UPP1-208	ENST00000436673	PWP2	Q15269	919 aa	Known RBP	31.08	■■■□□ 2.57
UPP1-208	ENST00000436673	KIAA1211	Q6ZU35	1233 aa		31.08	■■■□□ 2.57
UPP1-208	ENST00000436673	TMEM199	Q8N511	208 aa		31.08	■■■□□ 2.57

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms