RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 LRRC47Q8N1G4 583 aaKnown RBP8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 ACER1Q8TDN7 264 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 ZKSCAN4Q969J2 545 aaPredicted RBP8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 CHMP4CQ96CF2 233 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 WRNIP1Q96S55 665 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 SPSB2Q99619 263 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 CWC22Q9HCG8 908 aaKnown RBP8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 GINM1Q9NU53 330 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 SMC3Q9UQE7 1217 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 SRCAPQ6ZRS2 3230 aa8.18□□□□□ -1.1
LSM3P3-201ENST00000436601 CCDC196A0A1B0GTZ2 297 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 F5H6K3 240 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 CPLX1O14810 134 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 PLEKHA8P1O95397 391 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 GOLGA8HP0CJ92 632 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 SNHG28P0DPA3 235 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 PDHBP11177 359 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 IFNAR1P17181 557 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 PTPRAP18433 802 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 GJB2P29033 226 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 KLRC3Q07444 240 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 PPP2R5BQ15173 497 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 SLC35G1Q2M3R5 365 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 MAP7D1Q3KQU3 841 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 KIAA1755Q5JYT7 1200 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 NOL9Q5SY16 702 aaKnown RBP8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 TMTC3Q6ZXV5 915 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 MOB2Q70IA6 237 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 STAG2Q8N3U4 1231 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 SRBD1Q8N5C6 995 aaKnown RBP8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 GMCL1P1Q8NEA9 526 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 CTCFLQ8NI51 663 aaPredicted RBP8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 FAM174AQ8TBP5 190 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 WNT2BQ93097 391 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 DDX11Q96FC9 970 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 RBM28Q9NW13 759 aaKnown RBP8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 MAD2L2Q9UI95 211 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 SYNPO2Q9UMS6 1093 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 TMX2Q9Y320 296 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 SNCAIPQ9Y6H5 919 aa8.17□□□□□ -1.1
LSM3P3-201ENST00000436601 POTEB3A0JP26 581 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 USP17L15C9J2P7 530 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 USP17L10C9JJH3 530 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 USP17L13C9JLJ4 530 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 USP17L11C9JVI0 530 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 KLRF2D3W0D1 207 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 USP17L18D6R9N7 530 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 USP17L22D6RA61 530 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 USP17L17D6RBQ6 530 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 USP17L19D6RCP7 530 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 USP17L20D6RJB6 530 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 UBE2Q2LH0YL09 131 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 PPP1R12BO60237 982 aaPredicted RBP8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 ITGBL1O95965 494 aaPredicted RBP8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 NDUFB10O96000 172 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 PARP1P09874 1014 aaKnown RBP8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 MYH1P12882 1939 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 KIF5BP33176 963 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 ZNF543Q08ER8 600 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 USP17L24Q0WX57 530 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 PKP1Q13835 747 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 VGLL4Q14135 290 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 MAP3K11Q16584 847 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 SLFN13Q68D06 897 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 FRMPD2Q68DX3 1309 aaPredicted RBP8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 LHX8Q68G74 356 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 POTEBQ6S5H4 581 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 RNF135Q8IUD6 432 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 PHTF2Q8N3S3 785 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 STK32AQ8WU08 396 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 PHKBQ93100 1093 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 WDR18Q9BV38 432 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 ARHGEF10LQ9HCE6 1279 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 PICK1Q9NRD5 415 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 ZDHHC9Q9Y397 364 aa8.16□□□□□ -1.1
LSM3P3-201ENST00000436601 PRPF3O43395 683 aaKnown RBP8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 CYTH3O43739 400 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 CDKL5O76039 1030 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 SYT1P21579 422 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 NF2P35240 595 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 IREB2P48200 963 aaKnown RBP8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 GNAQP50148 359 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 HMGN5P82970 282 aaKnown RBP8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 SSRP1Q08945 709 aaKnown RBP8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 SPP2Q13103 211 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 PKN1Q16512 942 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 ASPRV1Q53RT3 343 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 LDLRAD1Q5T700 205 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 TTBK2Q6IQ55 1244 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 CPLX2Q6PUV4 134 aaKnown RBP8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 SPICE1Q8N0Z3 855 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 FAM160A2Q8N612 972 aaPredicted RBP8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 DCAF4Q8WV16 495 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 GMCL1Q96IK5 515 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 CLMNQ96JQ2 1002 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 AIFM3Q96NN9 605 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 NUP88Q99567 741 aaPredicted RBP8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 LZTS2Q9BRK4 669 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms