RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 TMCC1O94876 653 aa12.21□□□□□ -0.45
SCN4A-201ENST00000435607 KLHL7Q8IXQ5 586 aa12.21□□□□□ -0.45
SCN4A-201ENST00000435607 DCLK2Q8N568 766 aa12.21□□□□□ -0.45
SCN4A-201ENST00000435607 ACRBPQ8NEB7 543 aa12.21□□□□□ -0.45
SCN4A-201ENST00000435607 ZNF526Q8TF50 670 aaPredicted RBP12.21□□□□□ -0.45
SCN4A-201ENST00000435607 SUFUQ9UMX1 484 aa12.21□□□□□ -0.45
SCN4A-201ENST00000435607 ICA1Q05084 483 aa12.21□□□□□ -0.45
SCN4A-201ENST00000435607 RSBN1LQ6PCB5 846 aaPredicted RBP12.21□□□□□ -0.45
SCN4A-201ENST00000435607 PMLP29590 882 aa12.21□□□□□ -0.45
SCN4A-201ENST00000435607 ABCC1P33527 1531 aa12.21□□□□□ -0.45
SCN4A-201ENST00000435607 Q3C1V9 767 aa12.21□□□□□ -0.45
SCN4A-201ENST00000435607 ARL13BQ3SXY8 428 aa12.21□□□□□ -0.45
SCN4A-201ENST00000435607 TNNI3KQ59H18 835 aa12.21□□□□□ -0.45
SCN4A-201ENST00000435607 PLA2G4DQ86XP0 818 aa12.21□□□□□ -0.45
SCN4A-201ENST00000435607 DIS3L2Q8IYB7 885 aaKnown RBP12.21□□□□□ -0.45
SCN4A-201ENST00000435607 THEM5Q8N1Q8 247 aa12.21□□□□□ -0.45
SCN4A-201ENST00000435607 LSM14BQ9BX40 385 aaKnown RBP12.21□□□□□ -0.45
SCN4A-201ENST00000435607 FPGT-TNNI3KV9GXZ4 949 aa12.21□□□□□ -0.45
SCN4A-201ENST00000435607 FMNL1O95466 1100 aaPredicted RBP12.21□□□□□ -0.46
SCN4A-201ENST00000435607 ABCB5Q2M3G0 1257 aa12.21□□□□□ -0.46
SCN4A-201ENST00000435607 MTIF3Q9H2K0 278 aaKnown RBP12.21□□□□□ -0.46
SCN4A-201ENST00000435607 KLHL14Q9P2G3 628 aa12.21□□□□□ -0.46
SCN4A-201ENST00000435607 POLIQ9UNA4 740 aa12.21□□□□□ -0.46
SCN4A-201ENST00000435607 PCDHA1Q9Y5I3 950 aa12.21□□□□□ -0.46
SCN4A-201ENST00000435607 TMC4Q7Z404 712 aa12.21□□□□□ -0.46
SCN4A-201ENST00000435607 U2AF1L4Q8WU68 220 aaKnown RBP12.21□□□□□ -0.46
SCN4A-201ENST00000435607 TBC1D32Q96NH3 1257 aa12.21□□□□□ -0.46
SCN4A-201ENST00000435607 CCND2P30279 289 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 ARL4AP40617 200 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 NSFP46459 744 aaKnown RBP12.2□□□□□ -0.46
SCN4A-201ENST00000435607 C2orf69Q8N8R5 385 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 ARHGEF1Q92888 912 aaKnown RBP12.2□□□□□ -0.46
SCN4A-201ENST00000435607 CABS1Q96KC9 395 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 SMYD2Q9NRG4 433 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 ARMCX3Q9UH62 379 aaPredicted RBP12.2□□□□□ -0.46
SCN4A-201ENST00000435607 SOX5P35711 763 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 PDE1BQ01064 536 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 HP1BP3Q5SSJ5 553 aaPredicted RBP12.2□□□□□ -0.46
SCN4A-201ENST00000435607 OPTNQ96CV9 577 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 SLC10A4Q96EP9 437 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 CHEK2O96017 543 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 MRPL50Q8N5N7 158 aaKnown RBP12.2□□□□□ -0.46
SCN4A-201ENST00000435607 IFIH1Q9BYX4 1025 aaKnown RBP12.2□□□□□ -0.46
SCN4A-201ENST00000435607 HYOU1Q9Y4L1 999 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 INHBAP08476 426 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 KRT71Q3SY84 523 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 KHDRBS2Q5VWX1 349 aaKnown RBP12.2□□□□□ -0.46
SCN4A-201ENST00000435607 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.2□□□□□ -0.46
SCN4A-201ENST00000435607 MCUQ8NE86 351 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 RPGRIP1Q96KN7 1286 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 EFHD1Q9BUP0 239 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 THEGQ9P2T0 379 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 DDX25Q9UHL0 483 aaKnown RBP12.2□□□□□ -0.46
SCN4A-201ENST00000435607 NEMP1O14524 444 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 DDX5P17844 614 aaKnown RBP12.2□□□□□ -0.46
SCN4A-201ENST00000435607 RXRBP28702 533 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 ARHGDIAP52565 204 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 HSPA2P54652 639 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 SURF1Q15526 300 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 MTHFSDQ2M296 383 aaKnown RBP12.2□□□□□ -0.46
SCN4A-201ENST00000435607 FAM149B1Q96BN6 582 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 NUDCD1Q96RS6 583 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.2□□□□□ -0.46
SCN4A-201ENST00000435607 SFMBT1Q9UHJ3 866 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 ANKRD20A4Q4UJ75 823 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 ANKRD20A8PQ5CZ79 823 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 ANKRD20A2Q5SQ80 823 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 ANKRD20A1Q5TYW2 823 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 EDEM3Q9BZQ6 932 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 MRPL46Q9H2W6 279 aaKnown RBP12.2□□□□□ -0.46
SCN4A-201ENST00000435607 PANK4Q9NVE7 773 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 PCDHB4Q9Y5E5 795 aa12.2□□□□□ -0.46
SCN4A-201ENST00000435607 INO80B-WBP1J3KQ70 363 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 SART1O43290 800 aaKnown RBP12.19□□□□□ -0.46
SCN4A-201ENST00000435607 KLC3Q6P597 504 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 RRAGAQ7L523 313 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 INO80BQ9C086 356 aaPredicted RBP12.19□□□□□ -0.46
SCN4A-201ENST00000435607 ZFYVE9O95405 1425 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 ATF2P15336 505 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 TADA2BQ86TJ2 420 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 DHX38Q92620 1227 aaKnown RBP12.19□□□□□ -0.46
SCN4A-201ENST00000435607 GBP5Q96PP8 586 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 TRPC5Q9UL62 973 aaPredicted RBP12.19□□□□□ -0.46
SCN4A-201ENST00000435607 TIMM10P62072 90 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 TTC23LQ6PF05 361 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 TTC30BQ8N4P2 665 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 DNAAF3Q8N9W5 541 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 CCDC17Q96LX7 622 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 IMPACTQ9P2X3 320 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 HPCAL4Q9UM19 191 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 ASXL1Q8IXJ9 1541 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 TAF5LO75529 589 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 SLC4A1P02730 911 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 FBXL13Q8NEE6 735 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 PRDM1O75626 825 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 NPR1P16066 1061 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 YAF2Q8IY57 180 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 SIX6OS1Q8N1H7 587 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 URGCPQ8TCY9 931 aa12.19□□□□□ -0.46
SCN4A-201ENST00000435607 URB2Q14146 1524 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms