RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 MYH15Q9Y2K3 1946 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 FAM208AQ9UK61 1670 aaKnown RBP8.25□□□□□ -1.09
CPSF6-202ENST00000435070 TRIM75PA6NK02 468 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 PRDM1O75626 825 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 ADORA1P30542 326 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 PRCPP42785 496 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 TRIM22Q8IYM9 498 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 HOOK2Q96ED9 719 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 GSDMAQ96QA5 445 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 DDX21Q9NR30 783 aaKnown RBP eCLIP8.25□□□□□ -1.09
CPSF6-202ENST00000435070 BABAM1Q9NWV8 329 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 CNOT8Q9UFF9 292 aaKnown RBP8.25□□□□□ -1.09
CPSF6-202ENST00000435070 HYOU1Q9Y4L1 999 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 WNT7AO00755 349 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 SCARF1Q14162 830 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 FNBP4Q8N3X1 1017 aaPredicted RBP8.25□□□□□ -1.09
CPSF6-202ENST00000435070 CASKIN2Q8WXE0 1202 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 PIK3R5Q8WYR1 880 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 C15orf41Q9Y2V0 281 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 SIGLEC1Q9BZZ2 1709 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 ANO9A1A5B4 782 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 FTCDO95954 541 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 MMP1P03956 469 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 HOXB7P09629 217 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 CTNNA1P35221 906 aaKnown RBP8.25□□□□□ -1.09
CPSF6-202ENST00000435070 PMS1P54277 932 aaKnown RBP8.25□□□□□ -1.09
CPSF6-202ENST00000435070 SLC8A3P57103 927 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 HLFQ16534 295 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 SPICE1Q8N0Z3 855 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 TRIM58Q8NG06 486 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 SPATA20Q8TB22 786 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 STRN4Q9NRL3 753 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 FAM217BQ9NTX9 383 aaPredicted RBP8.25□□□□□ -1.09
CPSF6-202ENST00000435070 ZAP70P43403 619 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 NTRK3Q16288 839 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 CCDC170Q8IYT3 715 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 KIF2BQ8N4N8 673 aa8.25□□□□□ -1.09
CPSF6-202ENST00000435070 FAM207AQ9NSI2 230 aaPredicted RBP8.25□□□□□ -1.09
CPSF6-202ENST00000435070 OVOS2A0A0J9YW53 1432 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 TLDC2A0PJX2 215 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 FAM170AA1A519 330 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 HMGB1P1B2RPK0 211 aaPredicted RBP8.24□□□□□ -1.09
CPSF6-202ENST00000435070 MAGOHP61326 146 aaKnown RBP8.24□□□□□ -1.09
CPSF6-202ENST00000435070 EARS2Q5JPH6 523 aaKnown RBP8.24□□□□□ -1.09
CPSF6-202ENST00000435070 OVOS2Q6IE36 1432 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 C3orf20Q8ND61 904 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 MAGOHBQ96A72 148 aaKnown RBP8.24□□□□□ -1.09
CPSF6-202ENST00000435070 DLC1Q96QB1 1528 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 THRAP3Q9Y2W1 955 aaKnown RBP8.24□□□□□ -1.09
CPSF6-202ENST00000435070 CLTCQ00610 1675 aaKnown RBP8.24□□□□□ -1.09
CPSF6-202ENST00000435070 SH2B2O14492 632 aaPredicted RBP8.24□□□□□ -1.09
CPSF6-202ENST00000435070 IDH1O75874 414 aaKnown RBP8.24□□□□□ -1.09
CPSF6-202ENST00000435070 RASSF7Q02833 373 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 DRP2Q13474 957 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 ANKRD13DQ6ZTN6 518 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 CAVIN3Q969G5 261 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 ZNF570Q96NI8 536 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 MGRN1O60291 552 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 MAGEA1P43355 309 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 MTIF2P46199 727 aaKnown RBP8.24□□□□□ -1.09
CPSF6-202ENST00000435070 XRCC4Q13426 336 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 ZRSR2Q15696 482 aaKnown RBP8.24□□□□□ -1.09
CPSF6-202ENST00000435070 IRF2BP1Q8IU81 584 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 SEMA3EO15041 775 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 CTNND1O60716 968 aaKnown RBP8.24□□□□□ -1.09
CPSF6-202ENST00000435070 TCP1P17987 556 aaKnown RBP8.24□□□□□ -1.09
CPSF6-202ENST00000435070 IFFO1Q0D2I5 559 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 MAP3K12Q12852 859 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 KRT71Q3SY84 523 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 TTLL7Q6ZT98 887 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 ALS2CR12Q96Q35 445 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 SELENOSQ9BQE4 189 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 SALL4Q9UJQ4 1053 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 CAPN11Q9UMQ6 739 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 CD2APQ9Y5K6 639 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 XDHP47989 1333 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 A8MUI8 341 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 TRAPPC3O43617 180 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 EVI5O60447 810 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 IFNAR2P48551 515 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 CTDSPL2Q05D32 466 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 CDC37Q16543 378 aaPredicted RBP8.24□□□□□ -1.09
CPSF6-202ENST00000435070 BAZ2BQ9UIF8 2168 aaKnown RBP8.24□□□□□ -1.09
CPSF6-202ENST00000435070 MYO5BQ9ULV0 1848 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 KCNJ2P63252 427 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 GLE1Q53GS7 698 aaKnown RBP8.24□□□□□ -1.09
CPSF6-202ENST00000435070 CDCA2Q69YH5 1023 aaPredicted RBP8.24□□□□□ -1.09
CPSF6-202ENST00000435070 ELAC2Q9BQ52 826 aaKnown RBP8.24□□□□□ -1.09
CPSF6-202ENST00000435070 TRIM31Q9BZY9 425 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 CEP131Q9UPN4 1083 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 PCDHA13Q9Y5I0 950 aa8.24□□□□□ -1.09
CPSF6-202ENST00000435070 SMIM24O75264 130 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 TRIM37O94972 964 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 PYGLP06737 847 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 EIF4A3P38919 411 aaKnown RBP8.23□□□□□ -1.09
CPSF6-202ENST00000435070 BYSLQ13895 437 aaKnown RBP8.23□□□□□ -1.09
CPSF6-202ENST00000435070 PPP4R3AQ6IN85 833 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 MIS18BP1Q6P0N0 1132 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 MAB21L3Q8N8X9 362 aa8.23□□□□□ -1.09
CPSF6-202ENST00000435070 DNAJC7Q99615 494 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms