RNA–Protein interactions for RNA: ENST00000435039.3

PCOTH-203, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-203ENST00000435039 USP28Q96RU2 1077 aa12.99□□□□□ -0.33
PCOTH-203ENST00000435039 MCOLN1Q9GZU1 580 aa12.99□□□□□ -0.33
PCOTH-203ENST00000435039 RIC8AQ9NPQ8 531 aa12.99□□□□□ -0.33
PCOTH-203ENST00000435039 LMBRD1Q9NUN5 540 aa12.99□□□□□ -0.33
PCOTH-203ENST00000435039 FBXO28Q9NVF7 368 aa12.99□□□□□ -0.33
PCOTH-203ENST00000435039 RTEL1Q9NZ71 1219 aa12.99□□□□□ -0.33
PCOTH-203ENST00000435039 MORC2Q9Y6X9 1032 aaPredicted RBP12.99□□□□□ -0.33
PCOTH-203ENST00000435039 ABCB11O95342 1321 aa12.98□□□□□ -0.33
PCOTH-203ENST00000435039 PDE4DIPQ5VU43 2346 aa12.98□□□□□ -0.33
PCOTH-203ENST00000435039 SMCO2A6NFE2 343 aa12.98□□□□□ -0.33
PCOTH-203ENST00000435039 FLOT1O75955 427 aa12.98□□□□□ -0.33
PCOTH-203ENST00000435039 RGS19P49795 217 aa12.98□□□□□ -0.33
PCOTH-203ENST00000435039 C2orf69Q8N8R5 385 aa12.98□□□□□ -0.33
PCOTH-203ENST00000435039 KCNG4Q8TDN1 519 aa12.98□□□□□ -0.33
PCOTH-203ENST00000435039 CNKSR2Q8WXI2 1034 aa12.98□□□□□ -0.33
PCOTH-203ENST00000435039 OPTNQ96CV9 577 aa12.98□□□□□ -0.33
PCOTH-203ENST00000435039 SLC38A10Q9HBR0 1119 aa12.98□□□□□ -0.33
PCOTH-203ENST00000435039 GDPD2Q9HCC8 539 aa12.98□□□□□ -0.33
PCOTH-203ENST00000435039 PCDHA1Q9Y5I3 950 aa12.98□□□□□ -0.33
PCOTH-203ENST00000435039 TNRC18O15417 2968 aaPredicted RBP12.97□□□□□ -0.33
PCOTH-203ENST00000435039 CCDC194A0A1B0GVG4 234 aa12.97□□□□□ -0.33
PCOTH-203ENST00000435039 USP17L15C9J2P7 530 aa12.97□□□□□ -0.33
PCOTH-203ENST00000435039 USP17L13C9JLJ4 530 aa12.97□□□□□ -0.33
PCOTH-203ENST00000435039 USP17L11C9JVI0 530 aa12.97□□□□□ -0.33
PCOTH-203ENST00000435039 USP17L18D6R9N7 530 aa12.97□□□□□ -0.33
PCOTH-203ENST00000435039 USP17L22D6RA61 530 aa12.97□□□□□ -0.33
PCOTH-203ENST00000435039 USP17L17D6RBQ6 530 aa12.97□□□□□ -0.33
PCOTH-203ENST00000435039 USP17L19D6RCP7 530 aa12.97□□□□□ -0.33
PCOTH-203ENST00000435039 USP17L20D6RJB6 530 aa12.97□□□□□ -0.33
PCOTH-203ENST00000435039 IRF6O14896 467 aa12.97□□□□□ -0.33
PCOTH-203ENST00000435039 BMP15O95972 392 aa12.97□□□□□ -0.33
PCOTH-203ENST00000435039 MBD3O95983 291 aa12.97□□□□□ -0.33
PCOTH-203ENST00000435039 ICAM1P05362 532 aa12.97□□□□□ -0.33
PCOTH-203ENST00000435039 CLK2P49760 499 aaKnown RBP12.97□□□□□ -0.33
PCOTH-203ENST00000435039 MRPL12P52815 198 aaKnown RBP12.97□□□□□ -0.33
PCOTH-203ENST00000435039 UBE2HP62256 183 aa12.97□□□□□ -0.33
PCOTH-203ENST00000435039 USP17L24Q0WX57 530 aa12.97□□□□□ -0.33
PCOTH-203ENST00000435039 ANO1Q5XXA6 986 aa12.97□□□□□ -0.33
PCOTH-203ENST00000435039 MCTP2Q6DN12 878 aa12.97□□□□□ -0.33
PCOTH-203ENST00000435039 CCDC102AQ96A19 550 aa12.97□□□□□ -0.33
PCOTH-203ENST00000435039 FTOQ9C0B1 505 aaKnown RBP eCLIP12.97□□□□□ -0.33
PCOTH-203ENST00000435039 PCDHA6Q9UN73 950 aa12.97□□□□□ -0.33
PCOTH-203ENST00000435039 CEP131Q9UPN4 1083 aa12.97□□□□□ -0.33
PCOTH-203ENST00000435039 PCDHA8Q9Y5H6 950 aa12.97□□□□□ -0.33
PCOTH-203ENST00000435039 PRPF40AO75400 957 aaKnown RBP12.96□□□□□ -0.33
PCOTH-203ENST00000435039 ZNF157P51786 506 aaPredicted RBP12.96□□□□□ -0.33
PCOTH-203ENST00000435039 OAZ1P54368 228 aa12.96□□□□□ -0.33
PCOTH-203ENST00000435039 MLLT1Q03111 559 aaPredicted RBP12.96□□□□□ -0.33
PCOTH-203ENST00000435039 AP3B2Q13367 1082 aa12.96□□□□□ -0.33
PCOTH-203ENST00000435039 ORC2Q13416 577 aaPredicted RBP12.96□□□□□ -0.33
PCOTH-203ENST00000435039 STK38Q15208 465 aa12.96□□□□□ -0.33
PCOTH-203ENST00000435039 SKOR2Q2VWA4 1001 aaPredicted RBP12.96□□□□□ -0.33
PCOTH-203ENST00000435039 USH1GQ495M9 461 aa12.96□□□□□ -0.33
PCOTH-203ENST00000435039 EARS2Q5JPH6 523 aaKnown RBP12.96□□□□□ -0.33
PCOTH-203ENST00000435039 CATSPERGQ6ZRH7 1159 aa12.96□□□□□ -0.33
PCOTH-203ENST00000435039 PIK3AP1Q6ZUJ8 805 aa12.96□□□□□ -0.33
PCOTH-203ENST00000435039 LINC00301Q8NCQ3 95 aa12.96□□□□□ -0.33
PCOTH-203ENST00000435039 RCOR1Q9UKL0 485 aa12.96□□□□□ -0.33
PCOTH-203ENST00000435039 AGTPBP1Q9UPW5 1226 aa12.96□□□□□ -0.33
PCOTH-203ENST00000435039 MRPL11Q9Y3B7 192 aaKnown RBP12.96□□□□□ -0.33
PCOTH-203ENST00000435039 ZNF536O15090 1300 aa12.95□□□□□ -0.34
PCOTH-203ENST00000435039 FAM205CA6NFA0 338 aa12.95□□□□□ -0.34
PCOTH-203ENST00000435039 PIK3CDO00329 1044 aa12.95□□□□□ -0.34
PCOTH-203ENST00000435039 ZBED4O75132 1171 aa12.95□□□□□ -0.34
PCOTH-203ENST00000435039 PPP6R2O75170 966 aa12.95□□□□□ -0.34
PCOTH-203ENST00000435039 HOXA7P31268 230 aaPredicted RBP12.95□□□□□ -0.34
PCOTH-203ENST00000435039 DSG3P32926 999 aa12.95□□□□□ -0.34
PCOTH-203ENST00000435039 TOB1P50616 345 aaPredicted RBP12.95□□□□□ -0.34
PCOTH-203ENST00000435039 SNAP25P60880 206 aa12.95□□□□□ -0.34
PCOTH-203ENST00000435039 PABPC4Q13310 644 aaKnown RBP eCLIP12.95□□□□□ -0.34
PCOTH-203ENST00000435039 SNAPC2Q13487 334 aa12.95□□□□□ -0.34
PCOTH-203ENST00000435039 NBR1Q14596 966 aa12.95□□□□□ -0.34
PCOTH-203ENST00000435039 NONOQ15233 471 aaKnown RBP eCLIP12.95□□□□□ -0.34
PCOTH-203ENST00000435039 SF3A1Q15459 793 aaKnown RBP12.95□□□□□ -0.34
PCOTH-203ENST00000435039 KLHL40Q2TBA0 621 aa12.95□□□□□ -0.34
PCOTH-203ENST00000435039 TTC38Q5R3I4 469 aa12.95□□□□□ -0.34
PCOTH-203ENST00000435039 CCDC174Q6PII3 467 aa12.95□□□□□ -0.34
PCOTH-203ENST00000435039 FASTKD5Q7L8L6 764 aaKnown RBP12.95□□□□□ -0.34
PCOTH-203ENST00000435039 REPS2Q8NFH8 660 aa12.95□□□□□ -0.34
PCOTH-203ENST00000435039 RASGRP4Q8TDF6 673 aa12.95□□□□□ -0.34
PCOTH-203ENST00000435039 ATG4CQ96DT6 458 aa12.95□□□□□ -0.34
PCOTH-203ENST00000435039 WNK4Q96J92 1243 aa12.95□□□□□ -0.34
PCOTH-203ENST00000435039 PSTPIP2Q9H939 334 aa12.95□□□□□ -0.34
PCOTH-203ENST00000435039 SAGE1Q9NXZ1 904 aa12.95□□□□□ -0.34
PCOTH-203ENST00000435039 TFIP11Q9UBB9 837 aaKnown RBP12.95□□□□□ -0.34
PCOTH-203ENST00000435039 CCPG1Q9ULG6 757 aa12.95□□□□□ -0.34
PCOTH-203ENST00000435039 ADAMTS5Q9UNA0 930 aa12.95□□□□□ -0.34
PCOTH-203ENST00000435039 CLIC4Q9Y696 253 aa12.95□□□□□ -0.34
PCOTH-203ENST00000435039 SPDYE16A6NNV3 312 aaPredicted RBP12.94□□□□□ -0.34
PCOTH-203ENST00000435039 VWA5AO00534 786 aa12.94□□□□□ -0.34
PCOTH-203ENST00000435039 OPLAHO14841 1288 aa12.94□□□□□ -0.34
PCOTH-203ENST00000435039 ATP2A1O14983 1001 aa12.94□□□□□ -0.34
PCOTH-203ENST00000435039 ADAMTS3O15072 1205 aa12.94□□□□□ -0.34
PCOTH-203ENST00000435039 SPTLC2O15270 562 aa12.94□□□□□ -0.34
PCOTH-203ENST00000435039 SLC10A3P09131 477 aa12.94□□□□□ -0.34
PCOTH-203ENST00000435039 ZBTB48P10074 688 aaPredicted RBP12.94□□□□□ -0.34
PCOTH-203ENST00000435039 GJA5P36382 358 aa12.94□□□□□ -0.34
PCOTH-203ENST00000435039 GHRHRQ02643 423 aa12.94□□□□□ -0.34
PCOTH-203ENST00000435039 COG2Q14746 738 aa12.94□□□□□ -0.34
PCOTH-203ENST00000435039 SLC39A14Q15043 492 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms