RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 TMEM240Q5SV17 173 aa15.87■□□□□ 0.13
CDC42EP1-204ENST00000434728 CXCL17Q6UXB2 119 aa15.87■□□□□ 0.13
CDC42EP1-204ENST00000434728 ZNF365Q70YC5 407 aa15.87■□□□□ 0.13
CDC42EP1-204ENST00000434728 KCTD1Q719H9 257 aa15.87■□□□□ 0.13
CDC42EP1-204ENST00000434728 FAM126BQ8IXS8 530 aa15.87■□□□□ 0.13
CDC42EP1-204ENST00000434728 FGD4Q96M96 766 aa15.87■□□□□ 0.13
CDC42EP1-204ENST00000434728 SEC62Q99442 399 aaKnown RBP15.87■□□□□ 0.13
CDC42EP1-204ENST00000434728 HIPK3Q9H422 1215 aa15.87■□□□□ 0.13
CDC42EP1-204ENST00000434728 TOMM22Q9NS69 142 aa15.87■□□□□ 0.13
CDC42EP1-204ENST00000434728 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.86■□□□□ 0.13
CDC42EP1-204ENST00000434728 CYP2C18P33260 490 aa15.86■□□□□ 0.13
CDC42EP1-204ENST00000434728 NSMFQ6X4W1 530 aa15.86■□□□□ 0.13
CDC42EP1-204ENST00000434728 EEPD1Q7L9B9 569 aa15.86■□□□□ 0.13
CDC42EP1-204ENST00000434728 FAM133AQ8N9E0 248 aa15.86■□□□□ 0.13
CDC42EP1-204ENST00000434728 PBX4Q9BYU1 374 aa15.86■□□□□ 0.13
CDC42EP1-204ENST00000434728 CCPG1Q9ULG6 757 aa15.86■□□□□ 0.13
CDC42EP1-204ENST00000434728 GRXCR1A8MXD5 290 aa15.85■□□□□ 0.13
CDC42EP1-204ENST00000434728 DYNC1LI2O43237 492 aaPredicted RBP15.85■□□□□ 0.13
CDC42EP1-204ENST00000434728 RANBP6O60518 1105 aaKnown RBP15.85■□□□□ 0.13
CDC42EP1-204ENST00000434728 SNAP25P60880 206 aa15.85■□□□□ 0.13
CDC42EP1-204ENST00000434728 ITGA7Q13683 1181 aa15.85■□□□□ 0.13
CDC42EP1-204ENST00000434728 RAB30Q15771 203 aa15.85■□□□□ 0.13
CDC42EP1-204ENST00000434728 TJAP1Q5JTD0 557 aa15.85■□□□□ 0.13
CDC42EP1-204ENST00000434728 FBXO16Q8IX29 292 aaPredicted RBP15.85■□□□□ 0.13
CDC42EP1-204ENST00000434728 IL27Q8NEV9 243 aa15.85■□□□□ 0.13
CDC42EP1-204ENST00000434728 PRDM12Q9H4Q4 367 aa15.85■□□□□ 0.13
CDC42EP1-204ENST00000434728 IL23AQ9NPF7 189 aa15.85■□□□□ 0.13
CDC42EP1-204ENST00000434728 SOWAHBA6NEL2 793 aa15.84■□□□□ 0.13
CDC42EP1-204ENST00000434728 FGBP02675 491 aa15.84■□□□□ 0.13
CDC42EP1-204ENST00000434728 IGFBP4P22692 258 aa15.84■□□□□ 0.13
CDC42EP1-204ENST00000434728 PBX2P40425 430 aa15.84■□□□□ 0.13
CDC42EP1-204ENST00000434728 CTDSPL2Q05D32 466 aa15.84■□□□□ 0.13
CDC42EP1-204ENST00000434728 ZMYM1Q5SVZ6 1142 aa15.84■□□□□ 0.13
CDC42EP1-204ENST00000434728 RCSD1Q6JBY9 416 aa15.84■□□□□ 0.13
CDC42EP1-204ENST00000434728 KATNBL1Q9H079 304 aa15.84■□□□□ 0.13
CDC42EP1-204ENST00000434728 SLC28A3Q9HAS3 691 aa15.84■□□□□ 0.13
CDC42EP1-204ENST00000434728 ZBBXA8MT70 800 aa15.83■□□□□ 0.12
CDC42EP1-204ENST00000434728 MX1P20591 662 aa15.83■□□□□ 0.12
CDC42EP1-204ENST00000434728 CCL23P55773 120 aa15.83■□□□□ 0.12
CDC42EP1-204ENST00000434728 IQSEC1Q6DN90 963 aa15.83■□□□□ 0.12
CDC42EP1-204ENST00000434728 KIAA1211Q6ZU35 1233 aa15.83■□□□□ 0.12
CDC42EP1-204ENST00000434728 C16orf59Q7L2K0 433 aa15.83■□□□□ 0.12
CDC42EP1-204ENST00000434728 OTOP2Q7RTS6 562 aa15.83■□□□□ 0.12
CDC42EP1-204ENST00000434728 USP38Q8NB14 1042 aa15.83■□□□□ 0.12
CDC42EP1-204ENST00000434728 SEZ6LQ9BYH1 1024 aa15.83■□□□□ 0.12
CDC42EP1-204ENST00000434728 CYP39A1Q9NYL5 469 aa15.83■□□□□ 0.12
CDC42EP1-204ENST00000434728 ADD3Q9UEY8 706 aaKnown RBP15.83■□□□□ 0.12
CDC42EP1-204ENST00000434728 PRR12Q9ULL5 1215 aa15.83■□□□□ 0.12
CDC42EP1-204ENST00000434728 ZNF536O15090 1300 aa15.83■□□□□ 0.12
CDC42EP1-204ENST00000434728 LRRC37A2A6NM11 1700 aa15.82■□□□□ 0.12
CDC42EP1-204ENST00000434728 CTAGE5O15320 804 aa15.82■□□□□ 0.12
CDC42EP1-204ENST00000434728 NMT2O60551 498 aa15.82■□□□□ 0.12
CDC42EP1-204ENST00000434728 PLA2G6O60733 806 aa15.82■□□□□ 0.12
CDC42EP1-204ENST00000434728 CD4P01730 458 aa15.82■□□□□ 0.12
CDC42EP1-204ENST00000434728 SMPD1P17405 629 aa15.82■□□□□ 0.12
CDC42EP1-204ENST00000434728 MUM1L1Q5H9M0 696 aa15.82■□□□□ 0.12
CDC42EP1-204ENST00000434728 PI4K2BQ8TCG2 481 aa15.82■□□□□ 0.12
CDC42EP1-204ENST00000434728 HERVK_113Q902F9 699 aa15.82■□□□□ 0.12
CDC42EP1-204ENST00000434728 VTA1Q9NP79 307 aa15.82■□□□□ 0.12
CDC42EP1-204ENST00000434728 PRDM6Q9NQX0 595 aa15.82■□□□□ 0.12
CDC42EP1-204ENST00000434728 GPHNQ9NQX3 736 aaPredicted RBP15.82■□□□□ 0.12
CDC42EP1-204ENST00000434728 PDGFCQ9NRA1 345 aa15.82■□□□□ 0.12
CDC42EP1-204ENST00000434728 GNEQ9Y223 722 aaKnown RBP15.82■□□□□ 0.12
CDC42EP1-204ENST00000434728 DDX49Q9Y6V7 483 aaKnown RBP15.82■□□□□ 0.12
CDC42EP1-204ENST00000434728 ASTN1O14525 1302 aa15.82■□□□□ 0.12
CDC42EP1-204ENST00000434728 PTPDC1A2A3K4 754 aa15.81■□□□□ 0.12
CDC42EP1-204ENST00000434728 ICAM1P05362 532 aa15.81■□□□□ 0.12
CDC42EP1-204ENST00000434728 PSMC6P62333 389 aa15.81■□□□□ 0.12
CDC42EP1-204ENST00000434728 NKX3-2P78367 333 aa15.81■□□□□ 0.12
CDC42EP1-204ENST00000434728 CCDC85BQ15834 202 aaPredicted RBP15.81■□□□□ 0.12
CDC42EP1-204ENST00000434728 BRDTQ58F21 947 aaPredicted RBP15.81■□□□□ 0.12
CDC42EP1-204ENST00000434728 RRP12Q5JTH9 1297 aaKnown RBP15.81■□□□□ 0.12
CDC42EP1-204ENST00000434728 RPUSD2Q8IZ73 545 aaKnown RBP15.81■□□□□ 0.12
CDC42EP1-204ENST00000434728 DCAF4Q8WV16 495 aa15.81■□□□□ 0.12
CDC42EP1-204ENST00000434728 GBF1Q92538 1859 aa15.81■□□□□ 0.12
CDC42EP1-204ENST00000434728 MPHOSPH6Q99547 160 aaKnown RBP15.81■□□□□ 0.12
CDC42EP1-204ENST00000434728 TRPV6Q9H1D0 765 aa15.81■□□□□ 0.12
CDC42EP1-204ENST00000434728 NKX2-4Q9H2Z4 354 aa15.81■□□□□ 0.12
CDC42EP1-204ENST00000434728 THEGQ9P2T0 379 aa15.81■□□□□ 0.12
CDC42EP1-204ENST00000434728 SLC4A7Q9Y6M7 1214 aa15.81■□□□□ 0.12
CDC42EP1-204ENST00000434728 SPTBN5Q9NRC6 3674 aaKnown RBP15.81■□□□□ 0.12
CDC42EP1-204ENST00000434728 UMODL1Q5DID0 1318 aa15.8■□□□□ 0.12
CDC42EP1-204ENST00000434728 RAD50Q92878 1312 aa15.8■□□□□ 0.12
CDC42EP1-204ENST00000434728 B4GALT4O60513 344 aa15.8■□□□□ 0.12
CDC42EP1-204ENST00000434728 SLC16A2P36021 539 aa15.8■□□□□ 0.12
CDC42EP1-204ENST00000434728 RASIP1Q5U651 963 aa15.8■□□□□ 0.12
CDC42EP1-204ENST00000434728 RASGRP2Q7LDG7 609 aa15.8■□□□□ 0.12
CDC42EP1-204ENST00000434728 SLC43A3Q8NBI5 491 aa15.8■□□□□ 0.12
CDC42EP1-204ENST00000434728 OTUD7AQ8TE49 926 aaPredicted RBP15.8■□□□□ 0.12
CDC42EP1-204ENST00000434728 TSPYL2Q9H2G4 693 aaPredicted RBP15.8■□□□□ 0.12
CDC42EP1-204ENST00000434728 INCENPQ9NQS7 918 aa15.8■□□□□ 0.12
CDC42EP1-204ENST00000434728 POLR3EQ9NVU0 708 aa15.8■□□□□ 0.12
CDC42EP1-204ENST00000434728 CXXC1Q9P0U4 656 aaPredicted RBP15.8■□□□□ 0.12
CDC42EP1-204ENST00000434728 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.8■□□□□ 0.12
CDC42EP1-204ENST00000434728 Q9Y3F1 56 aa15.8■□□□□ 0.12
CDC42EP1-204ENST00000434728 CHD9Q3L8U1 2897 aa15.79■□□□□ 0.12
CDC42EP1-204ENST00000434728 FRMPD2Q68DX3 1309 aaPredicted RBP15.79■□□□□ 0.12
CDC42EP1-204ENST00000434728 TNFRSF10AO00220 468 aa15.79■□□□□ 0.12
CDC42EP1-204ENST00000434728 MYL3P08590 195 aa15.79■□□□□ 0.12
CDC42EP1-204ENST00000434728 SUPT20HL2P0C7V6 817 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms