RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 MYH4Q9Y623 1939 aa17.54■□□□□ 0.4
RPUSD3-208ENST00000433972 ZNFX1Q9P2E3 1918 aaKnown RBP17.53■□□□□ 0.4
RPUSD3-208ENST00000433972 TRIM6-TRIM34B2RNG4 842 aa17.53■□□□□ 0.4
RPUSD3-208ENST00000433972 ARVCFO00192 962 aa17.53■□□□□ 0.4
RPUSD3-208ENST00000433972 FGAP02671 866 aa17.53■□□□□ 0.4
RPUSD3-208ENST00000433972 CNTN2Q02246 1040 aa17.53■□□□□ 0.4
RPUSD3-208ENST00000433972 PPIGQ13427 754 aaKnown RBP eCLIP17.53■□□□□ 0.4
RPUSD3-208ENST00000433972 RRP12Q5JTH9 1297 aaKnown RBP17.53■□□□□ 0.4
RPUSD3-208ENST00000433972 VPS53Q5VIR6 699 aa17.53■□□□□ 0.4
RPUSD3-208ENST00000433972 FAM161BQ96MY7 647 aa17.53■□□□□ 0.4
RPUSD3-208ENST00000433972 GUCD1Q96NT3 240 aa17.53■□□□□ 0.4
RPUSD3-208ENST00000433972 MPHOSPH6Q99547 160 aaKnown RBP17.53■□□□□ 0.4
RPUSD3-208ENST00000433972 RNF41Q9H4P4 317 aaPredicted RBP17.53■□□□□ 0.4
RPUSD3-208ENST00000433972 CYP39A1Q9NYL5 469 aa17.53■□□□□ 0.4
RPUSD3-208ENST00000433972 Q9Y3F1 56 aa17.53■□□□□ 0.4
RPUSD3-208ENST00000433972 MYADML2A6NDP7 307 aa17.52■□□□□ 0.4
RPUSD3-208ENST00000433972 NMT2O60551 498 aa17.52■□□□□ 0.4
RPUSD3-208ENST00000433972 CDK7P50613 346 aa17.52■□□□□ 0.4
RPUSD3-208ENST00000433972 IQSEC1Q6DN90 963 aa17.52■□□□□ 0.4
RPUSD3-208ENST00000433972 MFSD5Q6N075 450 aa17.52■□□□□ 0.4
RPUSD3-208ENST00000433972 BTNL9Q6UXG8 535 aa17.52■□□□□ 0.4
RPUSD3-208ENST00000433972 TLK2Q86UE8 772 aa17.52■□□□□ 0.4
RPUSD3-208ENST00000433972 TMEM199Q8N511 208 aa17.52■□□□□ 0.4
RPUSD3-208ENST00000433972 TTC14Q96N46 770 aa17.52■□□□□ 0.4
RPUSD3-208ENST00000433972 KATNBL1Q9H079 304 aa17.52■□□□□ 0.4
RPUSD3-208ENST00000433972 RANBP17Q9H2T7 1088 aaKnown RBP17.52■□□□□ 0.4
RPUSD3-208ENST00000433972 VTA1Q9NP79 307 aa17.52■□□□□ 0.4
RPUSD3-208ENST00000433972 TBX21Q9UL17 535 aa17.52■□□□□ 0.4
RPUSD3-208ENST00000433972 MTMR7Q9Y216 660 aa17.52■□□□□ 0.4
RPUSD3-208ENST00000433972 CCDC171Q6TFL3 1326 aa17.51■□□□□ 0.39
RPUSD3-208ENST00000433972 SOWAHBA6NEL2 793 aa17.51■□□□□ 0.39
RPUSD3-208ENST00000433972 HSPD1P10809 573 aaKnown RBP17.51■□□□□ 0.39
RPUSD3-208ENST00000433972 ITGB8P26012 769 aa17.51■□□□□ 0.39
RPUSD3-208ENST00000433972 SYDE2Q5VT97 1194 aa17.51■□□□□ 0.39
RPUSD3-208ENST00000433972 NSMFQ6X4W1 530 aa17.51■□□□□ 0.39
RPUSD3-208ENST00000433972 MFSD6Q6ZSS7 791 aa17.51■□□□□ 0.39
RPUSD3-208ENST00000433972 CHMP4CQ96CF2 233 aa17.51■□□□□ 0.39
RPUSD3-208ENST00000433972 FAM227BQ96M60 508 aa17.51■□□□□ 0.39
RPUSD3-208ENST00000433972 SEMA6BQ9H3T3 888 aa17.51■□□□□ 0.39
RPUSD3-208ENST00000433972 A0A0D9SFI3 127 aa17.5■□□□□ 0.39
RPUSD3-208ENST00000433972 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.5■□□□□ 0.39
RPUSD3-208ENST00000433972 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.5■□□□□ 0.39
RPUSD3-208ENST00000433972 ADCY6O43306 1168 aa17.5■□□□□ 0.39
RPUSD3-208ENST00000433972 FSCN1Q16658 493 aaKnown RBP17.5■□□□□ 0.39
RPUSD3-208ENST00000433972 PSRC1Q6PGN9 363 aaPredicted RBP17.5■□□□□ 0.39
RPUSD3-208ENST00000433972 RILPL2Q969X0 211 aa17.5■□□□□ 0.39
RPUSD3-208ENST00000433972 TMEM47Q9BQJ4 181 aa17.5■□□□□ 0.39
RPUSD3-208ENST00000433972 MTIF3Q9H2K0 278 aaKnown RBP17.5■□□□□ 0.39
RPUSD3-208ENST00000433972 INCENPQ9NQS7 918 aa17.5■□□□□ 0.39
RPUSD3-208ENST00000433972 GNEQ9Y223 722 aaKnown RBP17.5■□□□□ 0.39
RPUSD3-208ENST00000433972 LAMA2P24043 3122 aaKnown RBP17.5■□□□□ 0.39
RPUSD3-208ENST00000433972 B4DLN1 442 aa17.49■□□□□ 0.39
RPUSD3-208ENST00000433972 HIP1O00291 1037 aa17.49■□□□□ 0.39
RPUSD3-208ENST00000433972 MRPL12P52815 198 aaKnown RBP17.49■□□□□ 0.39
RPUSD3-208ENST00000433972 CCDC178Q5BJE1 867 aa17.49■□□□□ 0.39
RPUSD3-208ENST00000433972 AKNAD1Q5T1N1 836 aa17.49■□□□□ 0.39
RPUSD3-208ENST00000433972 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.49■□□□□ 0.39
RPUSD3-208ENST00000433972 FAM126BQ8IXS8 530 aa17.49■□□□□ 0.39
RPUSD3-208ENST00000433972 ESR2Q92731 530 aa17.49■□□□□ 0.39
RPUSD3-208ENST00000433972 CDX2Q99626 313 aaPredicted RBP17.49■□□□□ 0.39
RPUSD3-208ENST00000433972 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.48■□□□□ 0.39
RPUSD3-208ENST00000433972 NMIQ13287 307 aaPredicted RBP17.48■□□□□ 0.39
RPUSD3-208ENST00000433972 MUM1L1Q5H9M0 696 aa17.48■□□□□ 0.39
RPUSD3-208ENST00000433972 GPATCH4Q5T3I0 446 aaKnown RBP17.48■□□□□ 0.39
RPUSD3-208ENST00000433972 MORC4Q8TE76 937 aa17.48■□□□□ 0.39
RPUSD3-208ENST00000433972 SMCHD1A6NHR9 2005 aa17.47■□□□□ 0.39
RPUSD3-208ENST00000433972 PTPDC1A2A3K4 754 aa17.47■□□□□ 0.39
RPUSD3-208ENST00000433972 ZNF213O14771 459 aa17.47■□□□□ 0.39
RPUSD3-208ENST00000433972 DYNC1LI2O43237 492 aaPredicted RBP17.47■□□□□ 0.39
RPUSD3-208ENST00000433972 PDHBP11177 359 aa17.47■□□□□ 0.39
RPUSD3-208ENST00000433972 SLC16A2P36021 539 aa17.47■□□□□ 0.39
RPUSD3-208ENST00000433972 EPHB4P54760 987 aa17.47■□□□□ 0.39
RPUSD3-208ENST00000433972 SNAP25P60880 206 aa17.47■□□□□ 0.39
RPUSD3-208ENST00000433972 BEX3Q00994 111 aa17.47■□□□□ 0.39
RPUSD3-208ENST00000433972 BRDTQ58F21 947 aaPredicted RBP17.47■□□□□ 0.39
RPUSD3-208ENST00000433972 CXCL17Q6UXB2 119 aa17.47■□□□□ 0.39
RPUSD3-208ENST00000433972 KIAA1211Q6ZU35 1233 aa17.47■□□□□ 0.39
RPUSD3-208ENST00000433972 ZNF589Q86UQ0 364 aaPredicted RBP17.47■□□□□ 0.39
RPUSD3-208ENST00000433972 IQCA1Q86XH1 822 aa17.47■□□□□ 0.39
RPUSD3-208ENST00000433972 FBXO16Q8IX29 292 aaPredicted RBP17.47■□□□□ 0.39
RPUSD3-208ENST00000433972 MAF1Q9H063 256 aa17.47■□□□□ 0.39
RPUSD3-208ENST00000433972 FRMPD2Q68DX3 1309 aaPredicted RBP17.47■□□□□ 0.39
RPUSD3-208ENST00000433972 WDR19Q8NEZ3 1342 aa17.47■□□□□ 0.39
RPUSD3-208ENST00000433972 RAD50Q92878 1312 aa17.47■□□□□ 0.39
RPUSD3-208ENST00000433972 CTAGE5O15320 804 aa17.46■□□□□ 0.39
RPUSD3-208ENST00000433972 FOSL2P15408 326 aa17.46■□□□□ 0.39
RPUSD3-208ENST00000433972 SMPD1P17405 629 aa17.46■□□□□ 0.39
RPUSD3-208ENST00000433972 DNAJB2P25686 324 aa17.46■□□□□ 0.39
RPUSD3-208ENST00000433972 CPT1AP50416 773 aa17.46■□□□□ 0.39
RPUSD3-208ENST00000433972 ALDH5A1P51649 535 aaPredicted RBP17.46■□□□□ 0.39
RPUSD3-208ENST00000433972 HAND2P61296 217 aa17.46■□□□□ 0.39
RPUSD3-208ENST00000433972 ZNF543Q08ER8 600 aa17.46■□□□□ 0.39
RPUSD3-208ENST00000433972 ITGA7Q13683 1181 aa17.46■□□□□ 0.39
RPUSD3-208ENST00000433972 BAATQ14032 418 aaPredicted RBP17.46■□□□□ 0.39
RPUSD3-208ENST00000433972 DUSP28Q4G0W2 176 aa17.46■□□□□ 0.39
RPUSD3-208ENST00000433972 TAPT1Q6NXT6 567 aa17.46■□□□□ 0.39
RPUSD3-208ENST00000433972 EEPD1Q7L9B9 569 aa17.46■□□□□ 0.39
RPUSD3-208ENST00000433972 DGKHQ86XP1 1220 aa17.46■□□□□ 0.39
RPUSD3-208ENST00000433972 PLEKHM2Q8IWE5 1019 aa17.46■□□□□ 0.39
RPUSD3-208ENST00000433972 SLC43A3Q8NBI5 491 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms