RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 SGMS1Q86VZ5 419 aa22.04■■□□□ 1.12
RPUSD3-207ENST00000433555 MTMR8Q96EF0 704 aa22.04■■□□□ 1.12
RPUSD3-207ENST00000433555 DDX11Q96FC9 970 aa22.04■■□□□ 1.12
RPUSD3-207ENST00000433555 PURBQ96QR8 312 aaKnown RBP22.04■■□□□ 1.12
RPUSD3-207ENST00000433555 HMX1Q9NP08 348 aaPredicted RBP22.04■■□□□ 1.12
RPUSD3-207ENST00000433555 CCDC69A6NI79 296 aa22.03■■□□□ 1.12
RPUSD3-207ENST00000433555 PLEKHA8P1O95397 391 aa22.03■■□□□ 1.12
RPUSD3-207ENST00000433555 PRAMEF19Q5SWL8 479 aa22.03■■□□□ 1.12
RPUSD3-207ENST00000433555 SLC30A10Q6XR72 485 aa22.03■■□□□ 1.12
RPUSD3-207ENST00000433555 CCDC144CPQ8IYA2 1237 aa22.03■■□□□ 1.12
RPUSD3-207ENST00000433555 FAM133AQ8N9E0 248 aa22.03■■□□□ 1.12
RPUSD3-207ENST00000433555 SLC5A4Q9NY91 659 aa22.03■■□□□ 1.12
RPUSD3-207ENST00000433555 CYP39A1Q9NYL5 469 aa22.03■■□□□ 1.12
RPUSD3-207ENST00000433555 BRPF3Q9ULD4 1205 aa22.03■■□□□ 1.12
RPUSD3-207ENST00000433555 DIS3Q9Y2L1 958 aaKnown RBP22.03■■□□□ 1.12
RPUSD3-207ENST00000433555 DDX49Q9Y6V7 483 aaKnown RBP22.03■■□□□ 1.12
RPUSD3-207ENST00000433555 SOWAHBA6NEL2 793 aa22.02■■□□□ 1.12
RPUSD3-207ENST00000433555 NSMFQ6X4W1 530 aa22.02■■□□□ 1.12
RPUSD3-207ENST00000433555 CRISPLD2Q9H0B8 497 aa22.02■■□□□ 1.12
RPUSD3-207ENST00000433555 RIOX1Q9H6W3 641 aa22.02■■□□□ 1.12
RPUSD3-207ENST00000433555 PFASO15067 1338 aa22.02■■□□□ 1.12
RPUSD3-207ENST00000433555 SGPL1O95470 568 aa22.01■■□□□ 1.11
RPUSD3-207ENST00000433555 SEC24BO95487 1268 aa22.01■■□□□ 1.11
RPUSD3-207ENST00000433555 RPS6KB1P23443 525 aa22.01■■□□□ 1.11
RPUSD3-207ENST00000433555 APOA5Q6Q788 366 aa22.01■■□□□ 1.11
RPUSD3-207ENST00000433555 MICU3Q86XE3 530 aa22.01■■□□□ 1.11
RPUSD3-207ENST00000433555 PIGSQ96S52 555 aa22.01■■□□□ 1.11
RPUSD3-207ENST00000433555 TINF2Q9BSI4 451 aa22.01■■□□□ 1.11
RPUSD3-207ENST00000433555 MKI67P46013 3256 aaKnown RBP22.01■■□□□ 1.11
RPUSD3-207ENST00000433555 TNRC18O15417 2968 aaPredicted RBP22■■□□□ 1.11
RPUSD3-207ENST00000433555 POTEB2H3BUK9 544 aa22■■□□□ 1.11
RPUSD3-207ENST00000433555 CASTP20810 708 aaKnown RBP22■■□□□ 1.11
RPUSD3-207ENST00000433555 BLOC1S2Q6QNY1 142 aa22■■□□□ 1.11
RPUSD3-207ENST00000433555 HOMER1Q86YM7 354 aa22■■□□□ 1.11
RPUSD3-207ENST00000433555 CMTR1Q8N1G2 835 aaKnown RBP22■■□□□ 1.11
RPUSD3-207ENST00000433555 CTCFLQ8NI51 663 aaPredicted RBP22■■□□□ 1.11
RPUSD3-207ENST00000433555 MAP3K14Q99558 947 aa22■■□□□ 1.11
RPUSD3-207ENST00000433555 SLC12A7Q9Y666 1083 aa22■■□□□ 1.11
RPUSD3-207ENST00000433555 SNAI1O95863 264 aaPredicted RBP21.99■■□□□ 1.11
RPUSD3-207ENST00000433555 HMGB1P09429 215 aaKnown RBP21.99■■□□□ 1.11
RPUSD3-207ENST00000433555 BAATQ14032 418 aaPredicted RBP21.99■■□□□ 1.11
RPUSD3-207ENST00000433555 C8orf34Q49A92 452 aa21.99■■□□□ 1.11
RPUSD3-207ENST00000433555 LHX8Q68G74 356 aa21.99■■□□□ 1.11
RPUSD3-207ENST00000433555 Q6ZUG5 572 aa21.99■■□□□ 1.11
RPUSD3-207ENST00000433555 ZNF467Q7Z7K2 595 aaPredicted RBP21.99■■□□□ 1.11
RPUSD3-207ENST00000433555 FBXO11Q86XK2 927 aa21.99■■□□□ 1.11
RPUSD3-207ENST00000433555 TMTC2Q8N394 836 aa21.99■■□□□ 1.11
RPUSD3-207ENST00000433555 ABCB11O95342 1321 aa21.99■■□□□ 1.11
RPUSD3-207ENST00000433555 KLF18A0A0U1RQI7 1052 aa21.98■■□□□ 1.11
RPUSD3-207ENST00000433555 OPLAHO14841 1288 aa21.98■■□□□ 1.11
RPUSD3-207ENST00000433555 ZBTB5O15062 677 aa21.98■■□□□ 1.11
RPUSD3-207ENST00000433555 MNX1P50219 401 aaPredicted RBP21.98■■□□□ 1.11
RPUSD3-207ENST00000433555 MAMDC4Q6UXC1 1216 aa21.98■■□□□ 1.11
RPUSD3-207ENST00000433555 UBE2Q1Q7Z7E8 422 aa21.98■■□□□ 1.11
RPUSD3-207ENST00000433555 SRBD1Q8N5C6 995 aaKnown RBP21.98■■□□□ 1.11
RPUSD3-207ENST00000433555 PIBF1Q8WXW3 757 aa21.98■■□□□ 1.11
RPUSD3-207ENST00000433555 TBC1D5Q92609 795 aa21.98■■□□□ 1.11
RPUSD3-207ENST00000433555 SPZ1Q9BXG8 430 aa21.98■■□□□ 1.11
RPUSD3-207ENST00000433555 SYNGAP1Q96PV0 1343 aa21.98■■□□□ 1.11
RPUSD3-207ENST00000433555 PTPDC1A2A3K4 754 aa21.97■■□□□ 1.11
RPUSD3-207ENST00000433555 ZNF865P0CJ78 1059 aaPredicted RBP21.97■■□□□ 1.11
RPUSD3-207ENST00000433555 KIF5BP33176 963 aa21.97■■□□□ 1.11
RPUSD3-207ENST00000433555 APOBRQ0VD83 1088 aa21.97■■□□□ 1.11
RPUSD3-207ENST00000433555 ANO1Q5XXA6 986 aa21.97■■□□□ 1.11
RPUSD3-207ENST00000433555 TMTC3Q6ZXV5 915 aa21.97■■□□□ 1.11
RPUSD3-207ENST00000433555 ARMCX2Q7L311 632 aa21.97■■□□□ 1.11
RPUSD3-207ENST00000433555 DIS3LQ8TF46 1054 aaKnown RBP21.97■■□□□ 1.11
RPUSD3-207ENST00000433555 BRF1Q92994 677 aa21.97■■□□□ 1.11
RPUSD3-207ENST00000433555 LENG1Q96BZ8 264 aaPredicted RBP21.97■■□□□ 1.11
RPUSD3-207ENST00000433555 KATNBL1Q9H079 304 aa21.97■■□□□ 1.11
RPUSD3-207ENST00000433555 DDX20Q9UHI6 824 aaKnown RBP21.97■■□□□ 1.11
RPUSD3-207ENST00000433555 PNMA2Q9UL42 364 aa21.97■■□□□ 1.11
RPUSD3-207ENST00000433555 CALM1P0DP23 149 aa21.96■■□□□ 1.11
RPUSD3-207ENST00000433555 CALM2P0DP24 149 aa21.96■■□□□ 1.11
RPUSD3-207ENST00000433555 CALM3P0DP25 149 aa21.96■■□□□ 1.11
RPUSD3-207ENST00000433555 CALML3P27482 149 aa21.96■■□□□ 1.11
RPUSD3-207ENST00000433555 CNGA1P29973 690 aa21.96■■□□□ 1.11
RPUSD3-207ENST00000433555 RPS6P62753 249 aaKnown RBP21.96■■□□□ 1.11
RPUSD3-207ENST00000433555 MLLT1Q03111 559 aaPredicted RBP21.96■■□□□ 1.11
RPUSD3-207ENST00000433555 RNF207Q6ZRF8 634 aa21.96■■□□□ 1.11
RPUSD3-207ENST00000433555 AMNQ9BXJ7 453 aa21.96■■□□□ 1.11
RPUSD3-207ENST00000433555 AGXT2Q9BYV1 514 aa21.96■■□□□ 1.11
RPUSD3-207ENST00000433555 UPF3BQ9BZI7 483 aaKnown RBP21.96■■□□□ 1.11
RPUSD3-207ENST00000433555 ZSWIM6Q9HCJ5 1215 aa21.96■■□□□ 1.11
RPUSD3-207ENST00000433555 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.96■■□□□ 1.11
RPUSD3-207ENST00000433555 COL20A1Q9P218 1284 aa21.96■■□□□ 1.11
RPUSD3-207ENST00000433555 OGDHLQ9ULD0 1010 aa21.96■■□□□ 1.11
RPUSD3-207ENST00000433555 CNTNAP5Q8WYK1 1306 aa21.96■■□□□ 1.11
RPUSD3-207ENST00000433555 NID2Q14112 1375 aa21.96■■□□□ 1.11
RPUSD3-207ENST00000433555 ZBTB43O43298 467 aa21.95■■□□□ 1.1
RPUSD3-207ENST00000433555 FARP2O94887 1054 aaPredicted RBP21.95■■□□□ 1.1
RPUSD3-207ENST00000433555 TFRCP02786 760 aaKnown RBP21.95■■□□□ 1.1
RPUSD3-207ENST00000433555 MSL3Q8N5Y2 521 aaKnown RBP21.95■■□□□ 1.1
RPUSD3-207ENST00000433555 FANCBQ8NB91 859 aa21.95■■□□□ 1.1
RPUSD3-207ENST00000433555 FAM217BQ9NTX9 383 aaPredicted RBP21.95■■□□□ 1.1
RPUSD3-207ENST00000433555 KIAA1217Q5T5P2 1943 aa21.94■■□□□ 1.1
RPUSD3-207ENST00000433555 hCG_1642624A0A1W2PR95 340 aa21.94■■□□□ 1.1
RPUSD3-207ENST00000433555 GOLGA8AA7E2F4 631 aa21.94■■□□□ 1.1
RPUSD3-207ENST00000433555 GOLGA8BA8MQT2 603 aa21.94■■□□□ 1.1
RPUSD3-207ENST00000433555 SEPT4O43236 478 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms