RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 FRMD4BQ9Y2L6 1034 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 CUL9Q8IWT3 2517 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 SMARCA5O60264 1052 aaPredicted RBP4.17□□□□□ -1.74
SHPRH-205ENST00000433355 ZC3H11AO75152 810 aaKnown RBP eCLIP4.17□□□□□ -1.74
SHPRH-205ENST00000433355 NEK8Q86SG6 692 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 UNC5CLQ8IV45 518 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 NEK11Q8NG66 645 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 HIBADHP31937 336 aaKnown RBP4.17□□□□□ -1.74
SHPRH-205ENST00000433355 NAA25Q14CX7 972 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 MEA1Q16626 185 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 CCDC14Q49A88 953 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 BRDTQ58F21 947 aaPredicted RBP4.17□□□□□ -1.74
SHPRH-205ENST00000433355 AXDND1Q5T1B0 1012 aaPredicted RBP4.17□□□□□ -1.74
SHPRH-205ENST00000433355 CCDC26Q8TAB7 109 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 CERKQ8TCT0 537 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 LRRC10BA6NIK2 292 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 CETN3O15182 167 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 TNNT1P13805 278 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 GRM4Q14833 912 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 CACNA2D4Q7Z3S7 1137 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 SSC5DA1L4H1 1573 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 TTLL1O95922 423 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 SLC15A2Q16348 729 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 ACBD5Q5T8D3 534 aaPredicted RBP4.17□□□□□ -1.74
SHPRH-205ENST00000433355 CCDC174Q6PII3 467 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 BLIDQ8IZY5 108 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 LARSQ9P2J5 1176 aaKnown RBP4.17□□□□□ -1.74
SHPRH-205ENST00000433355 A0A0D9SFI3 127 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 PLA2G6O60733 806 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 OR52Z1P0C646 297 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 MYBL1P10243 752 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 P4HA1P13674 534 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 SIKE1Q9BRV8 207 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 SLC4A4Q9Y6R1 1079 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 ADAMTS2O95450 1211 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 XRCC5P13010 732 aaKnown RBP4.17□□□□□ -1.74
SHPRH-205ENST00000433355 RFX5P48382 616 aaPredicted RBP4.17□□□□□ -1.74
SHPRH-205ENST00000433355 DNM1Q05193 864 aaKnown RBP4.17□□□□□ -1.74
SHPRH-205ENST00000433355 GRAPQ13588 217 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 ME3Q16798 604 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 LONRF3Q496Y0 759 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 KIAA1328Q86T90 577 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 TTLL11Q8NHH1 800 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 GRAPLQ8TC17 118 aaPredicted RBP4.17□□□□□ -1.74
SHPRH-205ENST00000433355 STRBPQ96SI9 672 aaKnown RBP4.17□□□□□ -1.74
SHPRH-205ENST00000433355 DNAJC5Q9H3Z4 198 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 BCAP29Q9UHQ4 241 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.17□□□□□ -1.74
SHPRH-205ENST00000433355 POTEFA5A3E0 1075 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 RPS6KA4O75676 772 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 CYP21A2P08686 494 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 POTEIP0CG38 1075 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 RFC4P35249 363 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 NPEPPSP55786 919 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 ATP2C1P98194 919 aaPredicted RBP4.16□□□□□ -1.74
SHPRH-205ENST00000433355 PLCB4Q15147 1175 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 NAALADL2Q58DX5 795 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 POTEEQ6S8J3 1075 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 TRIM72Q6ZMU5 477 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 RTKN2Q8IZC4 609 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 TMEM206Q9H813 350 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 TBC1D22BQ9NU19 505 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 SERPINB13Q9UIV8 391 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 GGA2Q9UJY4 613 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 MYL6BP14649 208 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 SYDE1Q6ZW31 735 aaPredicted RBP4.16□□□□□ -1.74
SHPRH-205ENST00000433355 MCPH1Q8NEM0 835 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 PCDHA4Q9UN74 947 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 CNPY2Q9Y2B0 182 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 MYH7BA7E2Y1 1941 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 CCDC169A6NNP5 214 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 ENTPD3O75355 529 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 CASQ1P31415 396 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 PRIM1P49642 420 aaKnown RBP4.16□□□□□ -1.74
SHPRH-205ENST00000433355 RBM42Q9BTD8 480 aaKnown RBP4.16□□□□□ -1.74
SHPRH-205ENST00000433355 NFE2L3Q9Y4A8 694 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 RIPOR2Q9Y4F9 1068 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 KIAA0100Q14667 2235 aaKnown RBP4.16□□□□□ -1.74
SHPRH-205ENST00000433355 A0A1B0GTH6 734 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 RASSF2P50749 326 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 TYW1Q9NV66 732 aaKnown RBP4.16□□□□□ -1.74
SHPRH-205ENST00000433355 ODF2LQ9ULJ1 636 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 PCDHA7Q9UN72 937 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 NAPAP54920 295 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 ODF2Q5BJF6 829 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 CDC37L1Q7L3B6 337 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 ZMYND12Q9H0C1 365 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 SIL1Q9H173 461 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 SUDS3Q9H7L9 328 aaPredicted RBP4.16□□□□□ -1.74
SHPRH-205ENST00000433355 TMX2Q9Y320 296 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 ZNF330Q9Y3S2 320 aaPredicted RBP4.16□□□□□ -1.74
SHPRH-205ENST00000433355 NEDD4P46934 1319 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 SPATA31A5Q5VU36 1347 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 SPATA31A7Q8IWB4 1347 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 RGPD2P0DJD1 1756 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 ACTN2P35609 894 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 MEX3CQ5U5Q3 659 aaKnown RBP4.16□□□□□ -1.74
SHPRH-205ENST00000433355 CRACR2BQ8N4Y2 399 aaPredicted RBP4.16□□□□□ -1.74
SHPRH-205ENST00000433355 DBNDD2Q9BQY9 259 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 CCNL1Q9UK58 526 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms