RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 MCM3APO60318 1980 aa19.08■□□□□ 0.65
ACTB-205ENST00000432588 TIMP1P01033 207 aa19.08■□□□□ 0.64
ACTB-205ENST00000432588 PCP11498 1178 aaKnown RBP19.08■□□□□ 0.64
ACTB-205ENST00000432588 IRX5P78411 483 aaPredicted RBP19.08■□□□□ 0.64
ACTB-205ENST00000432588 NMIQ13287 307 aaPredicted RBP19.08■□□□□ 0.64
ACTB-205ENST00000432588 MUM1L1Q5H9M0 696 aa19.08■□□□□ 0.64
ACTB-205ENST00000432588 NSMFQ6X4W1 530 aa19.08■□□□□ 0.64
ACTB-205ENST00000432588 RASGRP2Q7LDG7 609 aa19.08■□□□□ 0.64
ACTB-205ENST00000432588 RILPL2Q969X0 211 aa19.08■□□□□ 0.64
ACTB-205ENST00000432588 AP5M1Q9H0R1 490 aa19.08■□□□□ 0.64
ACTB-205ENST00000432588 TCP11L1Q9NUJ3 509 aa19.08■□□□□ 0.64
ACTB-205ENST00000432588 TBX21Q9UL17 535 aa19.08■□□□□ 0.64
ACTB-205ENST00000432588 UNC80Q8N2C7 3258 aa19.07■□□□□ 0.64
ACTB-205ENST00000432588 CCDC171Q6TFL3 1326 aa19.07■□□□□ 0.64
ACTB-205ENST00000432588 CUL9Q8IWT3 2517 aa19.07■□□□□ 0.64
ACTB-205ENST00000432588 ARVCFO00192 962 aa19.07■□□□□ 0.64
ACTB-205ENST00000432588 TLR3O15455 904 aaKnown RBP19.07■□□□□ 0.64
ACTB-205ENST00000432588 CDK7P50613 346 aa19.07■□□□□ 0.64
ACTB-205ENST00000432588 NKX3-2P78367 333 aa19.07■□□□□ 0.64
ACTB-205ENST00000432588 SYDE2Q5VT97 1194 aa19.07■□□□□ 0.64
ACTB-205ENST00000432588 BTNL9Q6UXG8 535 aa19.07■□□□□ 0.64
ACTB-205ENST00000432588 MFSD6Q6ZSS7 791 aa19.07■□□□□ 0.64
ACTB-205ENST00000432588 TLK2Q86UE8 772 aa19.07■□□□□ 0.64
ACTB-205ENST00000432588 ZNF589Q86UQ0 364 aaPredicted RBP19.07■□□□□ 0.64
ACTB-205ENST00000432588 TMEM47Q9BQJ4 181 aa19.07■□□□□ 0.64
ACTB-205ENST00000432588 RANBP17Q9H2T7 1088 aaKnown RBP19.07■□□□□ 0.64
ACTB-205ENST00000432588 RNF41Q9H4P4 317 aaPredicted RBP19.07■□□□□ 0.64
ACTB-205ENST00000432588 ADD3Q9UEY8 706 aaKnown RBP19.07■□□□□ 0.64
ACTB-205ENST00000432588 PNMA2Q9UL42 364 aa19.07■□□□□ 0.64
ACTB-205ENST00000432588 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.06■□□□□ 0.64
ACTB-205ENST00000432588 ZEB2O60315 1214 aa19.06■□□□□ 0.64
ACTB-205ENST00000432588 CABYRO75952 493 aa19.06■□□□□ 0.64
ACTB-205ENST00000432588 SLC16A2P36021 539 aa19.06■□□□□ 0.64
ACTB-205ENST00000432588 EPHB4P54760 987 aa19.06■□□□□ 0.64
ACTB-205ENST00000432588 HAND2P61296 217 aa19.06■□□□□ 0.64
ACTB-205ENST00000432588 AKNAD1Q5T1N1 836 aa19.06■□□□□ 0.64
ACTB-205ENST00000432588 IQSEC1Q6DN90 963 aa19.06■□□□□ 0.64
ACTB-205ENST00000432588 TTC14Q96N46 770 aa19.06■□□□□ 0.64
ACTB-205ENST00000432588 SEMA6BQ9H3T3 888 aa19.06■□□□□ 0.64
ACTB-205ENST00000432588 FRMPD2Q68DX3 1309 aaPredicted RBP19.05■□□□□ 0.64
ACTB-205ENST00000432588 CTAGE5O15320 804 aa19.05■□□□□ 0.64
ACTB-205ENST00000432588 BEX3Q00994 111 aa19.05■□□□□ 0.64
ACTB-205ENST00000432588 PPIGQ13427 754 aaKnown RBP eCLIP19.05■□□□□ 0.64
ACTB-205ENST00000432588 FSCN1Q16658 493 aaKnown RBP19.05■□□□□ 0.64
ACTB-205ENST00000432588 TTBK2Q6IQ55 1244 aa19.05■□□□□ 0.64
ACTB-205ENST00000432588 B4GALNT3Q6L9W6 998 aa19.05■□□□□ 0.64
ACTB-205ENST00000432588 MFSD5Q6N075 450 aa19.05■□□□□ 0.64
ACTB-205ENST00000432588 SMC5Q8IY18 1101 aa19.05■□□□□ 0.64
ACTB-205ENST00000432588 VTA1Q9NP79 307 aa19.05■□□□□ 0.64
ACTB-205ENST00000432588 GPCPD1Q9NPB8 672 aa19.05■□□□□ 0.64
ACTB-205ENST00000432588 GNEQ9Y223 722 aaKnown RBP19.05■□□□□ 0.64
ACTB-205ENST00000432588 Q9Y3F1 56 aa19.05■□□□□ 0.64
ACTB-205ENST00000432588 ASTN1O14525 1302 aa19.04■□□□□ 0.64
ACTB-205ENST00000432588 TMEM265A0A087WTH1 108 aa19.04■□□□□ 0.64
ACTB-205ENST00000432588 LOC102724159A0A0B4J2E5 919 aa19.04■□□□□ 0.64
ACTB-205ENST00000432588 DYNC1LI2O43237 492 aaPredicted RBP19.04■□□□□ 0.64
ACTB-205ENST00000432588 PDHBP11177 359 aa19.04■□□□□ 0.64
ACTB-205ENST00000432588 PWP2Q15269 919 aaKnown RBP19.04■□□□□ 0.64
ACTB-205ENST00000432588 CXCL17Q6UXB2 119 aa19.04■□□□□ 0.64
ACTB-205ENST00000432588 EEPD1Q7L9B9 569 aa19.04■□□□□ 0.64
ACTB-205ENST00000432588 CHD1LQ86WJ1 897 aa19.04■□□□□ 0.64
ACTB-205ENST00000432588 FBXO16Q8IX29 292 aaPredicted RBP19.04■□□□□ 0.64
ACTB-205ENST00000432588 FAM126BQ8IXS8 530 aa19.04■□□□□ 0.64
ACTB-205ENST00000432588 TMEM199Q8N511 208 aa19.04■□□□□ 0.64
ACTB-205ENST00000432588 ESR2Q92731 530 aa19.04■□□□□ 0.64
ACTB-205ENST00000432588 CDX2Q99626 313 aaPredicted RBP19.04■□□□□ 0.64
ACTB-205ENST00000432588 SEZ6LQ9BYH1 1024 aa19.04■□□□□ 0.64
ACTB-205ENST00000432588 CDH23Q9H251 3354 aa19.04■□□□□ 0.64
ACTB-205ENST00000432588 SMPD1P17405 629 aa19.03■□□□□ 0.64
ACTB-205ENST00000432588 SDSP20132 328 aa19.03■□□□□ 0.64
ACTB-205ENST00000432588 NT5C2P49902 561 aa19.03■□□□□ 0.64
ACTB-205ENST00000432588 BAATQ14032 418 aaPredicted RBP19.03■□□□□ 0.64
ACTB-205ENST00000432588 TAPT1Q6NXT6 567 aa19.03■□□□□ 0.64
ACTB-205ENST00000432588 MORC4Q8TE76 937 aa19.03■□□□□ 0.64
ACTB-205ENST00000432588 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.02■□□□□ 0.64
ACTB-205ENST00000432588 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.02■□□□□ 0.64
ACTB-205ENST00000432588 PTPDC1A2A3K4 754 aa19.02■□□□□ 0.64
ACTB-205ENST00000432588 NFIBO00712 420 aa19.02■□□□□ 0.64
ACTB-205ENST00000432588 ZNF213O14771 459 aa19.02■□□□□ 0.64
ACTB-205ENST00000432588 ZNF543Q08ER8 600 aa19.02■□□□□ 0.64
ACTB-205ENST00000432588 KIAA1211Q6ZU35 1233 aa19.02■□□□□ 0.64
ACTB-205ENST00000432588 TBC1D10CQ8IV04 446 aa19.02■□□□□ 0.64
ACTB-205ENST00000432588 YTHDC1Q96MU7 727 aaKnown RBP19.02■□□□□ 0.64
ACTB-205ENST00000432588 MPHOSPH6Q99547 160 aaKnown RBP19.02■□□□□ 0.64
ACTB-205ENST00000432588 TTYH1Q9H313 450 aaPredicted RBP19.02■□□□□ 0.64
ACTB-205ENST00000432588 OSBPL3Q9H4L5 887 aa19.02■□□□□ 0.64
ACTB-205ENST00000432588 PDGFCQ9NRA1 345 aa19.02■□□□□ 0.64
ACTB-205ENST00000432588 HIP1O00291 1037 aa19.01■□□□□ 0.63
ACTB-205ENST00000432588 CD4P01730 458 aa19.01■□□□□ 0.63
ACTB-205ENST00000432588 ALDH5A1P51649 535 aaPredicted RBP19.01■□□□□ 0.63
ACTB-205ENST00000432588 NUCB1Q02818 461 aa19.01■□□□□ 0.63
ACTB-205ENST00000432588 ITGA7Q13683 1181 aa19.01■□□□□ 0.63
ACTB-205ENST00000432588 GPATCH4Q5T3I0 446 aaKnown RBP19.01■□□□□ 0.63
ACTB-205ENST00000432588 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.01■□□□□ 0.637e-13■■■■□ 19.9
ACTB-205ENST00000432588 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.01■□□□□ 0.632e-24■■□□□ 12.9
ACTB-205ENST00000432588 PPP1R12CQ9BZL4 782 aa19.01■□□□□ 0.63
ACTB-205ENST00000432588 DIAPH3Q9NSV4 1193 aa19.01■□□□□ 0.63
ACTB-205ENST00000432588 DDX49Q9Y6V7 483 aaKnown RBP19.01■□□□□ 0.63
ACTB-205ENST00000432588 LRRC37A2A6NM11 1700 aa19■□□□□ 0.63
ACTB-205ENST00000432588 SNHG28P0DPA3 235 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms