RNA–Protein interactions for RNA: ENST00000432547.7

TTR-202, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 745 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-202ENST00000432547 TTLL6Q8N841 843 aa8.42□□□□□ -1.06
TTR-202ENST00000432547 GLIS3Q8NEA6 775 aa8.42□□□□□ -1.06
TTR-202ENST00000432547 CCDC86Q9H6F5 360 aaKnown RBP8.42□□□□□ -1.06
TTR-202ENST00000432547 ABCB6Q9NP58 842 aa8.42□□□□□ -1.06
TTR-202ENST00000432547 MBNL3Q9NUK0 354 aaKnown RBP8.42□□□□□ -1.06
TTR-202ENST00000432547 CRIM1Q9NZV1 1036 aa8.42□□□□□ -1.06
TTR-202ENST00000432547 RNF181Q9P0P0 153 aa8.42□□□□□ -1.06
TTR-202ENST00000432547 KDM2BQ8NHM5 1336 aa8.41□□□□□ -1.06
TTR-202ENST00000432547 PATL2C9JE40 543 aaKnown RBP8.41□□□□□ -1.06
TTR-202ENST00000432547 H0YIN7 160 aa8.41□□□□□ -1.06
TTR-202ENST00000432547 HTATSF1O43719 755 aaKnown RBP8.41□□□□□ -1.06
TTR-202ENST00000432547 LIG1P18858 919 aa8.41□□□□□ -1.06
TTR-202ENST00000432547 FUT4P22083 530 aa8.41□□□□□ -1.06
TTR-202ENST00000432547 PRELPP51888 382 aa8.41□□□□□ -1.06
TTR-202ENST00000432547 PDE4CQ08493 712 aa8.41□□□□□ -1.06
TTR-202ENST00000432547 KCNA1Q09470 495 aa8.41□□□□□ -1.06
TTR-202ENST00000432547 ORC1Q13415 861 aa8.41□□□□□ -1.06
TTR-202ENST00000432547 PDE3AQ14432 1141 aa8.41□□□□□ -1.06
TTR-202ENST00000432547 PRR5LQ6MZQ0 368 aa8.41□□□□□ -1.06
TTR-202ENST00000432547 MCM10Q7L590 875 aa8.41□□□□□ -1.06
TTR-202ENST00000432547 C2CD5Q86YS7 1000 aa8.41□□□□□ -1.06
TTR-202ENST00000432547 STK11IPQ8N1F8 1099 aa8.41□□□□□ -1.06
TTR-202ENST00000432547 BRIP1Q9BX63 1249 aa8.41□□□□□ -1.06
TTR-202ENST00000432547 ZFYVE1Q9HBF4 777 aa8.41□□□□□ -1.06
TTR-202ENST00000432547 PCDHGC5Q9Y5F6 944 aa8.41□□□□□ -1.06
TTR-202ENST00000432547 PRAMEF22A3QJZ6 481 aa8.4□□□□□ -1.06
TTR-202ENST00000432547 ZNF862O60290 1169 aa8.4□□□□□ -1.06
TTR-202ENST00000432547 RNASE1P07998 156 aaKnown RBP8.4□□□□□ -1.06
TTR-202ENST00000432547 SNRPA1P09661 255 aaKnown RBP8.4□□□□□ -1.06
TTR-202ENST00000432547 FAM87AP0C7U9 286 aa8.4□□□□□ -1.06
TTR-202ENST00000432547 LMNB1P20700 586 aa8.4□□□□□ -1.06
TTR-202ENST00000432547 FAAP100Q0VG06 881 aa8.4□□□□□ -1.06
TTR-202ENST00000432547 DCTN1Q14203 1278 aa8.4□□□□□ -1.06
TTR-202ENST00000432547 RTF1Q92541 710 aaKnown RBP8.4□□□□□ -1.06
TTR-202ENST00000432547 FANCD2OSQ96PS1 177 aa8.4□□□□□ -1.06
TTR-202ENST00000432547 NPHS2Q9NP85 383 aa8.4□□□□□ -1.06
TTR-202ENST00000432547 USP16Q9Y5T5 823 aa8.4□□□□□ -1.06
TTR-202ENST00000432547 TAF1P21675 1872 aa8.4□□□□□ -1.07
TTR-202ENST00000432547 BRD1O95696 1058 aa8.39□□□□□ -1.07
TTR-202ENST00000432547 PDE6BP35913 854 aa8.39□□□□□ -1.07
TTR-202ENST00000432547 RALBP1Q15311 655 aa8.39□□□□□ -1.07
TTR-202ENST00000432547 CYP27C1Q4G0S4 372 aa8.39□□□□□ -1.07
TTR-202ENST00000432547 CLEC4GQ6UXB4 293 aa8.39□□□□□ -1.07
TTR-202ENST00000432547 CNBD1Q8NA66 436 aa8.39□□□□□ -1.07
TTR-202ENST00000432547 MISP3Q96FF7 219 aa8.39□□□□□ -1.07
TTR-202ENST00000432547 SETDB2Q96T68 719 aa8.39□□□□□ -1.07
TTR-202ENST00000432547 EHD4Q9H223 541 aa8.39□□□□□ -1.07
TTR-202ENST00000432547 DISC1Q9NRI5 854 aa8.39□□□□□ -1.07
TTR-202ENST00000432547 ADAMTSL1Q8N6G6 1762 aa8.38□□□□□ -1.07
TTR-202ENST00000432547 DDX60Q8IY21 1712 aaKnown RBP8.38□□□□□ -1.07
TTR-202ENST00000432547 MYBBP1AQ9BQG0 1328 aaKnown RBP8.38□□□□□ -1.07
TTR-202ENST00000432547 ICMTO60725 284 aa8.38□□□□□ -1.07
TTR-202ENST00000432547 LEFTY1O75610 366 aa8.38□□□□□ -1.07
TTR-202ENST00000432547 PIP4K2AP48426 406 aaPredicted RBP8.38□□□□□ -1.07
TTR-202ENST00000432547 PTPN12Q05209 780 aaKnown RBP8.38□□□□□ -1.07
TTR-202ENST00000432547 FSTL1Q12841 308 aa8.38□□□□□ -1.07
TTR-202ENST00000432547 AP3B2Q13367 1082 aa8.38□□□□□ -1.07
TTR-202ENST00000432547 TAF7Q15545 349 aaPredicted RBP8.38□□□□□ -1.07
TTR-202ENST00000432547 ATG4DQ86TL0 474 aaPredicted RBP8.38□□□□□ -1.07
TTR-202ENST00000432547 C16orf71Q8IYS4 520 aaPredicted RBP8.38□□□□□ -1.07
TTR-202ENST00000432547 DNAJC5GQ8N7S2 189 aa8.38□□□□□ -1.07
TTR-202ENST00000432547 NETO1Q8TDF5 533 aa8.38□□□□□ -1.07
TTR-202ENST00000432547 PLEKHF1Q96S99 279 aa8.38□□□□□ -1.07
TTR-202ENST00000432547 PRKRIP1Q9H875 184 aaPredicted RBP8.38□□□□□ -1.07
TTR-202ENST00000432547 TRPM7Q96QT4 1865 aa8.38□□□□□ -1.07
TTR-202ENST00000432547 LTBP3Q9NS15 1303 aa8.37□□□□□ -1.07
TTR-202ENST00000432547 GLTPD2A6NH11 291 aa8.37□□□□□ -1.07
TTR-202ENST00000432547 IGHA2P01877 340 aa8.37□□□□□ -1.07
TTR-202ENST00000432547 SRGNP10124 158 aa8.37□□□□□ -1.07
TTR-202ENST00000432547 ZNF157P51786 506 aaPredicted RBP8.37□□□□□ -1.07
TTR-202ENST00000432547 ST5P78524 1137 aa8.37□□□□□ -1.07
TTR-202ENST00000432547 STYK1Q6J9G0 422 aa8.37□□□□□ -1.07
TTR-202ENST00000432547 PRPF40BQ6NWY9 871 aaKnown RBP8.37□□□□□ -1.07
TTR-202ENST00000432547 SPOCD1Q6ZMY3 1216 aa8.37□□□□□ -1.07
TTR-202ENST00000432547 ZNF622Q969S3 477 aaKnown RBP eCLIP8.37□□□□□ -1.07
TTR-202ENST00000432547 KRTAP4-2Q9BYR5 136 aa8.37□□□□□ -1.07
TTR-202ENST00000432547 ZC3H12CQ9C0D7 883 aaKnown RBP8.37□□□□□ -1.07
TTR-202ENST00000432547 RC3H2Q9HBD1 1191 aaKnown RBP8.37□□□□□ -1.07
TTR-202ENST00000432547 PLAGL2Q9UPG8 496 aa8.37□□□□□ -1.07
TTR-202ENST00000432547 ZNF652Q9Y2D9 606 aa8.37□□□□□ -1.07
TTR-202ENST00000432547 BIN1O00499 593 aa8.36□□□□□ -1.07
TTR-202ENST00000432547 NEFMP07197 916 aa8.36□□□□□ -1.07
TTR-202ENST00000432547 ARHGAP4P98171 946 aa8.36□□□□□ -1.07
TTR-202ENST00000432547 LRRN4CLQ8ND94 238 aa8.36□□□□□ -1.07
TTR-202ENST00000432547 MASTLQ96GX5 879 aa8.36□□□□□ -1.07
TTR-202ENST00000432547 FAM129BQ96TA1 746 aa8.36□□□□□ -1.07
TTR-202ENST00000432547 RIC1Q4ADV7 1423 aa8.36□□□□□ -1.07
TTR-202ENST00000432547 SNED1Q8TER0 1413 aa8.36□□□□□ -1.07
TTR-202ENST00000432547 LRRC37AA6NMS7 1700 aa8.35□□□□□ -1.07
TTR-202ENST00000432547 KLRG2A4D1S0 409 aaPredicted RBP8.35□□□□□ -1.07
TTR-202ENST00000432547 NPHP1O15259 732 aa8.35□□□□□ -1.07
TTR-202ENST00000432547 VEGFAP15692 232 aaPredicted RBP8.35□□□□□ -1.07
TTR-202ENST00000432547 OXCT1P55809 520 aa8.35□□□□□ -1.07
TTR-202ENST00000432547 ID3Q02535 119 aa8.35□□□□□ -1.07
TTR-202ENST00000432547 PRKCQQ04759 706 aa8.35□□□□□ -1.07
TTR-202ENST00000432547 NFE2L2Q16236 605 aa8.35□□□□□ -1.07
TTR-202ENST00000432547 CCDC27Q2M243 656 aa8.35□□□□□ -1.07
TTR-202ENST00000432547 KIF4BQ2VIQ3 1234 aa8.35□□□□□ -1.07
TTR-202ENST00000432547 SOGA3Q5TF21 947 aa8.35□□□□□ -1.07
TTR-202ENST00000432547 NBPF5PQ86XG9 351 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms