RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 TFAP4Q01664 338 aa11.18□□□□□ -0.62
CDC42-IT1-201ENST00000431803 MAMDC4Q6UXC1 1216 aa11.18□□□□□ -0.62
CDC42-IT1-201ENST00000431803 CCDC129Q6ZRS4 1044 aa11.18□□□□□ -0.62
CDC42-IT1-201ENST00000431803 KIFC2Q96AC6 838 aa11.18□□□□□ -0.62
CDC42-IT1-201ENST00000431803 KCTD12Q96CX2 325 aaKnown RBP11.18□□□□□ -0.62
CDC42-IT1-201ENST00000431803 GMCL1Q96IK5 515 aa11.18□□□□□ -0.62
CDC42-IT1-201ENST00000431803 XPNPEP3Q9NQH7 507 aa11.18□□□□□ -0.62
CDC42-IT1-201ENST00000431803 PHF24Q9UPV7 400 aa11.18□□□□□ -0.62
CDC42-IT1-201ENST00000431803 ATP11BQ9Y2G3 1177 aa11.18□□□□□ -0.62
CDC42-IT1-201ENST00000431803 SNAI1O95863 264 aaPredicted RBP11.17□□□□□ -0.62
CDC42-IT1-201ENST00000431803 BMP3P12645 472 aa11.17□□□□□ -0.62
CDC42-IT1-201ENST00000431803 AKR1A1P14550 325 aa11.17□□□□□ -0.62
CDC42-IT1-201ENST00000431803 PDE1AP54750 535 aa11.17□□□□□ -0.62
CDC42-IT1-201ENST00000431803 TRIM60Q495X7 471 aa11.17□□□□□ -0.62
CDC42-IT1-201ENST00000431803 ANKRD45Q5TZF3 282 aa11.17□□□□□ -0.62
CDC42-IT1-201ENST00000431803 VPS53Q5VIR6 699 aa11.17□□□□□ -0.62
CDC42-IT1-201ENST00000431803 SLFN13Q68D06 897 aa11.17□□□□□ -0.62
CDC42-IT1-201ENST00000431803 RNF180Q86T96 592 aa11.17□□□□□ -0.62
CDC42-IT1-201ENST00000431803 TICAM2Q86XR7 235 aa11.17□□□□□ -0.62
CDC42-IT1-201ENST00000431803 CPXCR1Q8N123 301 aa11.17□□□□□ -0.62
CDC42-IT1-201ENST00000431803 LENG1Q96BZ8 264 aaPredicted RBP11.17□□□□□ -0.62
CDC42-IT1-201ENST00000431803 EVI5LQ96CN4 794 aa11.17□□□□□ -0.62
CDC42-IT1-201ENST00000431803 FGD4Q96M96 766 aa11.17□□□□□ -0.62
CDC42-IT1-201ENST00000431803 LBHD1Q9BQE6 289 aaPredicted RBP11.17□□□□□ -0.62
CDC42-IT1-201ENST00000431803 RAVER2Q9HCJ3 691 aaKnown RBP11.17□□□□□ -0.62
CDC42-IT1-201ENST00000431803 PDLIM7Q9NR12 457 aa11.17□□□□□ -0.62
CDC42-IT1-201ENST00000431803 ANAPC4Q9UJX5 808 aa11.17□□□□□ -0.62
CDC42-IT1-201ENST00000431803 CNPY2Q9Y2B0 182 aa11.17□□□□□ -0.62
CDC42-IT1-201ENST00000431803 PLA2G6O60733 806 aa11.16□□□□□ -0.62
CDC42-IT1-201ENST00000431803 ADAMTS4O75173 837 aa11.16□□□□□ -0.62
CDC42-IT1-201ENST00000431803 PGK1P00558 417 aa11.16□□□□□ -0.62
CDC42-IT1-201ENST00000431803 FGRP09769 529 aa11.16□□□□□ -0.62
CDC42-IT1-201ENST00000431803 FDX1P10109 184 aa11.16□□□□□ -0.62
CDC42-IT1-201ENST00000431803 NOVP48745 357 aa11.16□□□□□ -0.62
CDC42-IT1-201ENST00000431803 STAT2P52630 851 aa11.16□□□□□ -0.62
CDC42-IT1-201ENST00000431803 ALX1Q15699 326 aa11.16□□□□□ -0.62
CDC42-IT1-201ENST00000431803 DEFB123Q8N688 67 aa11.16□□□□□ -0.62
CDC42-IT1-201ENST00000431803 CHST13Q8NET6 341 aa11.16□□□□□ -0.62
CDC42-IT1-201ENST00000431803 FERMT2Q96AC1 680 aa11.16□□□□□ -0.62
CDC42-IT1-201ENST00000431803 DDX11Q96FC9 970 aa11.16□□□□□ -0.62
CDC42-IT1-201ENST00000431803 IL17RBQ9NRM6 502 aa11.16□□□□□ -0.62
CDC42-IT1-201ENST00000431803 PRKAG2Q9UGJ0 569 aa11.16□□□□□ -0.62
CDC42-IT1-201ENST00000431803 FBXO40Q9UH90 709 aa11.16□□□□□ -0.62
CDC42-IT1-201ENST00000431803 RABGEF1Q9UJ41 708 aa11.16□□□□□ -0.62
CDC42-IT1-201ENST00000431803 TACC3Q9Y6A5 838 aa11.16□□□□□ -0.62
CDC42-IT1-201ENST00000431803 CDH23Q9H251 3354 aa11.16□□□□□ -0.62
CDC42-IT1-201ENST00000431803 ZNF536O15090 1300 aa11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 ZMYM6O95789 1325 aa11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 SYNRGQ9UMZ2 1314 aa11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 A0A1W2PQ45 241 aaPredicted RBP11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 A0A1W2PQY0 241 aa11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 TSPY2A6NKD2 308 aa11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 TMEM232C9JQI7 657 aa11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 ORC4O43929 436 aa11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 NMT2O60551 498 aa11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 MLLT3P42568 568 aaPredicted RBP11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 SLC1A4P43007 532 aa11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 CTDSPL2Q05D32 466 aa11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 AAMPQ13685 434 aa11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 CCSAPQ6IQ19 270 aaPredicted RBP11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 Q7L0L9 218 aa11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 FAM160B2Q86V87 743 aa11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 ANKRD35Q8N283 1001 aa11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 FAM227BQ96M60 508 aa11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 INCENPQ9NQS7 918 aa11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 HELLSQ9NRZ9 838 aa11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 STX8Q9UNK0 236 aa11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 CTDP1Q9Y5B0 961 aaPredicted RBP11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 PRUNE2Q8WUY3 3088 aa11.15□□□□□ -0.62
CDC42-IT1-201ENST00000431803 A0A0D9SFI3 127 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 TRIM43BA6NCK2 446 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 GOLGA8CPA6NN73 597 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 ADCY6O43306 1168 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 DUSP11O75319 330 aaKnown RBP11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 MCCP23508 829 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 CST5P28325 142 aaPredicted RBP11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 SLC4A3P48751 1232 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 TLE2Q04725 743 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 ACVR2BQ13705 512 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 RASGRP2Q7LDG7 609 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 SH3RF1Q7Z6J0 888 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 SMC5Q8IY18 1101 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 FAM133AQ8N9E0 248 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 KLHDC9Q8NEP7 349 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 CHURC1Q8WUH1 139 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 STAG1Q8WVM7 1258 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 TRIM43Q96BQ3 446 aaPredicted RBP11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 TSEN34Q9BSV6 310 aaKnown RBP11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 KATNBL1Q9H079 304 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 ABHD16BQ9H3Z7 469 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 ACAD9Q9H845 621 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 A1CFQ9NQ94 594 aaKnown RBP11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 PRDM5Q9NQX1 630 aaPredicted RBP11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 HOMER2Q9NSB8 354 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 MTMR10Q9NXD2 777 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 KIAA1468Q9P260 1216 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 ZHX1Q9UKY1 873 aaPredicted RBP11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 FAM184BQ9ULE4 1060 aa11.14□□□□□ -0.63
CDC42-IT1-201ENST00000431803 MCM3APO60318 1980 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms