RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 ZNF205O95201 554 aa3.59□□□□□ -1.83
CDC40-204ENST00000431461 PLATP00750 562 aa3.59□□□□□ -1.83
CDC40-204ENST00000431461 VAV1P15498 845 aa3.59□□□□□ -1.83
CDC40-204ENST00000431461 MC3RP41968 323 aa3.59□□□□□ -1.83
CDC40-204ENST00000431461 GJA9P57773 515 aa3.59□□□□□ -1.83
CDC40-204ENST00000431461 HTRA3P83110 453 aa3.59□□□□□ -1.83
CDC40-204ENST00000431461 XPCQ01831 940 aaPredicted RBP3.59□□□□□ -1.83
CDC40-204ENST00000431461 MVKQ03426 396 aa3.59□□□□□ -1.83
CDC40-204ENST00000431461 FAM160A1Q05DH4 1040 aa3.59□□□□□ -1.83
CDC40-204ENST00000431461 HNRNPA0Q13151 305 aaKnown RBP3.59□□□□□ -1.83
CDC40-204ENST00000431461 CWF19L2Q2TBE0 894 aaKnown RBP3.59□□□□□ -1.83
CDC40-204ENST00000431461 SNAP47Q5SQN1 464 aa3.59□□□□□ -1.83
CDC40-204ENST00000431461 CHST13Q8NET6 341 aa3.59□□□□□ -1.83
CDC40-204ENST00000431461 FBXO27Q8NI29 283 aa3.59□□□□□ -1.83
CDC40-204ENST00000431461 CNNM2Q9H8M5 875 aa3.59□□□□□ -1.83
CDC40-204ENST00000431461 MRS2Q9HD23 443 aa3.59□□□□□ -1.83
CDC40-204ENST00000431461 PRR13Q9NZ81 148 aa3.59□□□□□ -1.83
CDC40-204ENST00000431461 MINDY4BA8MYZ0 360 aa3.58□□□□□ -1.84
CDC40-204ENST00000431461 CLEC3AO75596 197 aa3.58□□□□□ -1.84
CDC40-204ENST00000431461 ATF2P15336 505 aa3.58□□□□□ -1.84
CDC40-204ENST00000431461 FBLN1P23142 703 aa3.58□□□□□ -1.84
CDC40-204ENST00000431461 VAMP1P23763 118 aa3.58□□□□□ -1.84
CDC40-204ENST00000431461 CTSKP43235 329 aa3.58□□□□□ -1.84
CDC40-204ENST00000431461 FOXO4P98177 505 aa3.58□□□□□ -1.84
CDC40-204ENST00000431461 PAQR3Q6TCH7 311 aa3.58□□□□□ -1.84
CDC40-204ENST00000431461 RGS22Q8NE09 1264 aa3.58□□□□□ -1.84
CDC40-204ENST00000431461 SH3RF3Q8TEJ3 882 aaPredicted RBP3.58□□□□□ -1.84
CDC40-204ENST00000431461 ATG4CQ96DT6 458 aa3.58□□□□□ -1.84
CDC40-204ENST00000431461 ZNF512BQ96KM6 892 aaPredicted RBP3.58□□□□□ -1.84
CDC40-204ENST00000431461 CDK5RAP1Q96SZ6 601 aaKnown RBP3.58□□□□□ -1.84
CDC40-204ENST00000431461 LRRC3Q9BY71 257 aa3.58□□□□□ -1.84
CDC40-204ENST00000431461 RNF38Q9H0F5 515 aa3.58□□□□□ -1.84
CDC40-204ENST00000431461 BCAS3Q9H6U6 928 aa3.58□□□□□ -1.84
CDC40-204ENST00000431461 EHMT1Q9H9B1 1298 aa3.58□□□□□ -1.84
CDC40-204ENST00000431461 BRMS1Q9HCU9 246 aa3.58□□□□□ -1.84
CDC40-204ENST00000431461 KCNQ5Q9NR82 932 aa3.58□□□□□ -1.84
CDC40-204ENST00000431461 ST6GALNAC2Q9UJ37 374 aa3.58□□□□□ -1.84
CDC40-204ENST00000431461 PCDHB14Q9Y5E9 798 aa3.58□□□□□ -1.84
CDC40-204ENST00000431461 A0A1W2PQ27 194 aa3.57□□□□□ -1.84
CDC40-204ENST00000431461 A0A1W2PQ64 194 aa3.57□□□□□ -1.84
CDC40-204ENST00000431461 A0A1W2PQC6 194 aa3.57□□□□□ -1.84
CDC40-204ENST00000431461 A0A1W2PQD8 194 aa3.57□□□□□ -1.84
CDC40-204ENST00000431461 SRGAP3O43295 1099 aa3.57□□□□□ -1.84
CDC40-204ENST00000431461 GREM1O60565 184 aa3.57□□□□□ -1.84
CDC40-204ENST00000431461 CYBBP04839 570 aa3.57□□□□□ -1.84
CDC40-204ENST00000431461 POLR2BP30876 1174 aaKnown RBP3.57□□□□□ -1.84
CDC40-204ENST00000431461 HLA-DQA1Q5Y7H0 255 aa3.57□□□□□ -1.84
CDC40-204ENST00000431461 FBXL19Q6PCT2 694 aa3.57□□□□□ -1.84
CDC40-204ENST00000431461 FBXO33Q7Z6M2 555 aa3.57□□□□□ -1.84
CDC40-204ENST00000431461 CARFQ8N187 725 aa3.57□□□□□ -1.84
CDC40-204ENST00000431461 KISS1RQ969F8 398 aaPredicted RBP3.57□□□□□ -1.84
CDC40-204ENST00000431461 JMJD8Q96S16 334 aa3.57□□□□□ -1.84
CDC40-204ENST00000431461 RXFP1Q9HBX9 757 aa3.57□□□□□ -1.84
CDC40-204ENST00000431461 AP5S1Q9NUS5 200 aa3.57□□□□□ -1.84
CDC40-204ENST00000431461 PCDHB12Q9Y5F1 795 aa3.57□□□□□ -1.84
CDC40-204ENST00000431461 SORBS3O60504 671 aa3.56□□□□□ -1.84
CDC40-204ENST00000431461 DBHP09172 617 aa3.56□□□□□ -1.84
CDC40-204ENST00000431461 AUHQ13825 339 aaKnown RBP3.56□□□□□ -1.84
CDC40-204ENST00000431461 RTP2Q5QGT7 225 aa3.56□□□□□ -1.84
CDC40-204ENST00000431461 OVOS1Q6IE37 1185 aa3.56□□□□□ -1.84
CDC40-204ENST00000431461 NLRC3Q7RTR2 1065 aa3.56□□□□□ -1.84
CDC40-204ENST00000431461 TMEM192Q8IY95 271 aa3.56□□□□□ -1.84
CDC40-204ENST00000431461 NLGN2Q8NFZ4 835 aa3.56□□□□□ -1.84
CDC40-204ENST00000431461 GIPC2Q8TF65 315 aa3.56□□□□□ -1.84
CDC40-204ENST00000431461 ZNF747Q9BV97 191 aa3.56□□□□□ -1.84
CDC40-204ENST00000431461 ANTXR1Q9H6X2 564 aa3.56□□□□□ -1.84
CDC40-204ENST00000431461 GFOD1Q9NXC2 390 aa3.56□□□□□ -1.84
CDC40-204ENST00000431461 FBXL21Q9UKT6 434 aa3.56□□□□□ -1.84
CDC40-204ENST00000431461 A0A1W2PQJ5 194 aa3.55□□□□□ -1.84
CDC40-204ENST00000431461 E9PSI1 815 aa3.55□□□□□ -1.84
CDC40-204ENST00000431461 TNFRSF10CO14798 259 aa3.55□□□□□ -1.84
CDC40-204ENST00000431461 TLR3O15455 904 aaKnown RBP3.55□□□□□ -1.84
CDC40-204ENST00000431461 GSNP06396 782 aa3.55□□□□□ -1.84
CDC40-204ENST00000431461 NCAM1P13591 858 aa3.55□□□□□ -1.84
CDC40-204ENST00000431461 NME1P15531 152 aaKnown RBP3.55□□□□□ -1.84
CDC40-204ENST00000431461 TACR1P25103 407 aa3.55□□□□□ -1.84
CDC40-204ENST00000431461 ATXN1P54253 815 aaKnown RBP3.55□□□□□ -1.84
CDC40-204ENST00000431461 DLX2Q07687 328 aaPredicted RBP3.55□□□□□ -1.84
CDC40-204ENST00000431461 LRRFIP1Q32MZ4 808 aaKnown RBP3.55□□□□□ -1.84
CDC40-204ENST00000431461 TBC1D10BQ4KMP7 808 aaPredicted RBP3.55□□□□□ -1.84
CDC40-204ENST00000431461 BICRALQ6AI39 1079 aa3.55□□□□□ -1.84
CDC40-204ENST00000431461 ZNF575Q86XF7 245 aa3.55□□□□□ -1.84
CDC40-204ENST00000431461 REXO1Q8N1G1 1221 aaKnown RBP3.55□□□□□ -1.84
CDC40-204ENST00000431461 FAM161BQ96MY7 647 aa3.55□□□□□ -1.84
CDC40-204ENST00000431461 SRRTQ9BXP5 876 aaKnown RBP3.55□□□□□ -1.84
CDC40-204ENST00000431461 MKRN2Q9H000 416 aaKnown RBP3.55□□□□□ -1.84
CDC40-204ENST00000431461 PDLIM7Q9NR12 457 aa3.55□□□□□ -1.84
CDC40-204ENST00000431461 ING1Q9UK53 422 aaPredicted RBP3.55□□□□□ -1.84
CDC40-204ENST00000431461 DBR1Q9UK59 544 aaKnown RBP3.55□□□□□ -1.84
CDC40-204ENST00000431461 SUPT16HQ9Y5B9 1047 aaKnown RBP3.55□□□□□ -1.84
CDC40-204ENST00000431461 ZNF16P17020 682 aaPredicted RBP3.54□□□□□ -1.84
CDC40-204ENST00000431461 EIF4A3P38919 411 aaKnown RBP3.54□□□□□ -1.84
CDC40-204ENST00000431461 RANGAP1P46060 587 aaPredicted RBP3.54□□□□□ -1.84
CDC40-204ENST00000431461 CORO7P57737 925 aa3.54□□□□□ -1.84
CDC40-204ENST00000431461 TGFB2P61812 414 aa3.54□□□□□ -1.84
CDC40-204ENST00000431461 PRR5P85299 388 aa3.54□□□□□ -1.84
CDC40-204ENST00000431461 KIAA2012Q0VF49 1180 aa3.54□□□□□ -1.84
CDC40-204ENST00000431461 SMN1Q16637 294 aaKnown RBP3.54□□□□□ -1.84
CDC40-204ENST00000431461 ANKRD39Q53RE8 183 aa3.54□□□□□ -1.84
CDC40-204ENST00000431461 INTS3Q68E01 1043 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms