RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 R3HDMLQ9H3Y0 253 aa20.89■□□□□ 0.94
HMGN1-206ENST00000431390 ELP3Q9H9T3 547 aa20.89■□□□□ 0.94
HMGN1-206ENST00000431390 POLR3EQ9NVU0 708 aa20.89■□□□□ 0.94
HMGN1-206ENST00000431390 RTEL1Q9NZ71 1219 aa20.89■□□□□ 0.94
HMGN1-206ENST00000431390 TMOD4Q9NZQ9 345 aa20.89■□□□□ 0.94
HMGN1-206ENST00000431390 LOC285556D6RIA3 1793 aa20.89■□□□□ 0.93
HMGN1-206ENST00000431390 HMGCS2P54868 508 aa20.89■□□□□ 0.93
HMGN1-206ENST00000431390 LEO1Q8WVC0 666 aaPredicted RBP20.89■□□□□ 0.93
HMGN1-206ENST00000431390 KIFC2Q96AC6 838 aa20.89■□□□□ 0.93
HMGN1-206ENST00000431390 GLT8D2Q9H1C3 349 aa20.89■□□□□ 0.93
HMGN1-206ENST00000431390 RPAP3Q9H6T3 665 aaPredicted RBP20.89■□□□□ 0.93
HMGN1-206ENST00000431390 YEATS4O95619 227 aa20.88■□□□□ 0.93
HMGN1-206ENST00000431390 NASPP49321 788 aaPredicted RBP20.88■□□□□ 0.93
HMGN1-206ENST00000431390 CLMNQ96JQ2 1002 aa20.88■□□□□ 0.93
HMGN1-206ENST00000431390 TANGO6Q9C0B7 1094 aa20.88■□□□□ 0.93
HMGN1-206ENST00000431390 FBXO28Q9NVF7 368 aa20.88■□□□□ 0.93
HMGN1-206ENST00000431390 RCOR1Q9UKL0 485 aa20.88■□□□□ 0.93
HMGN1-206ENST00000431390 PCDHA1Q9Y5I3 950 aa20.88■□□□□ 0.93
HMGN1-206ENST00000431390 CXCL11O14625 94 aa20.87■□□□□ 0.93
HMGN1-206ENST00000431390 FKTNO75072 461 aa20.87■□□□□ 0.93
HMGN1-206ENST00000431390 FDX1P10109 184 aa20.87■□□□□ 0.93
HMGN1-206ENST00000431390 ADCY7P51828 1080 aa20.87■□□□□ 0.93
HMGN1-206ENST00000431390 PPIL2Q13356 520 aa20.87■□□□□ 0.93
HMGN1-206ENST00000431390 SKOR2Q2VWA4 1001 aaPredicted RBP20.87■□□□□ 0.93
HMGN1-206ENST00000431390 ANO1Q5XXA6 986 aa20.87■□□□□ 0.93
HMGN1-206ENST00000431390 RIC8AQ9NPQ8 531 aa20.87■□□□□ 0.93
HMGN1-206ENST00000431390 NOL7Q9UMY1 257 aaKnown RBP20.87■□□□□ 0.93
HMGN1-206ENST00000431390 PCDHA6Q9UN73 950 aa20.87■□□□□ 0.93
HMGN1-206ENST00000431390 PCDHA8Q9Y5H6 950 aa20.87■□□□□ 0.93
HMGN1-206ENST00000431390 RLFQ13129 1914 aa20.86■□□□□ 0.93
HMGN1-206ENST00000431390 TRAPPC10P48553 1259 aa20.86■□□□□ 0.93
HMGN1-206ENST00000431390 SPRYD7Q5W111 196 aa20.86■□□□□ 0.93
HMGN1-206ENST00000431390 TEX2Q8IWB9 1127 aa20.86■□□□□ 0.93
HMGN1-206ENST00000431390 CFHR5Q9BXR6 569 aa20.86■□□□□ 0.93
HMGN1-206ENST00000431390 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.86■□□□□ 0.93
HMGN1-206ENST00000431390 PPP1R9AQ9ULJ8 1098 aa20.86■□□□□ 0.93
HMGN1-206ENST00000431390 KCNH4Q9UQ05 1017 aa20.86■□□□□ 0.93
HMGN1-206ENST00000431390 FLOT1O75955 427 aa20.85■□□□□ 0.93
HMGN1-206ENST00000431390 MRPL12P52815 198 aaKnown RBP20.85■□□□□ 0.93
HMGN1-206ENST00000431390 SNAP25P60880 206 aa20.85■□□□□ 0.93
HMGN1-206ENST00000431390 EARS2Q5JPH6 523 aaKnown RBP20.85■□□□□ 0.93
HMGN1-206ENST00000431390 KRT25Q7Z3Z0 450 aa20.85■□□□□ 0.93
HMGN1-206ENST00000431390 CNKSR2Q8WXI2 1034 aa20.85■□□□□ 0.93
HMGN1-206ENST00000431390 CUL5Q93034 780 aa20.85■□□□□ 0.93
HMGN1-206ENST00000431390 OTUD5Q96G74 571 aa20.85■□□□□ 0.93
HMGN1-206ENST00000431390 FTOQ9C0B1 505 aaKnown RBP eCLIP20.85■□□□□ 0.937e-6■■□□□ 12.9
HMGN1-206ENST00000431390 CLIC4Q9Y696 253 aa20.85■□□□□ 0.93
HMGN1-206ENST00000431390 CCDC194A0A1B0GVG4 234 aa20.85■□□□□ 0.93
HMGN1-206ENST00000431390 ADAMTS3O15072 1205 aa20.85■□□□□ 0.93
HMGN1-206ENST00000431390 TOB1P50616 345 aaPredicted RBP20.85■□□□□ 0.93
HMGN1-206ENST00000431390 UBE2HP62256 183 aa20.85■□□□□ 0.93
HMGN1-206ENST00000431390 CEBPZQ03701 1054 aaKnown RBP20.85■□□□□ 0.93
HMGN1-206ENST00000431390 PIK3AP1Q6ZUJ8 805 aa20.85■□□□□ 0.93
HMGN1-206ENST00000431390 REXO1Q8N1G1 1221 aaKnown RBP20.85■□□□□ 0.93
HMGN1-206ENST00000431390 LINC00301Q8NCQ3 95 aa20.85■□□□□ 0.93
HMGN1-206ENST00000431390 PROCA1Q8NCQ7 364 aaPredicted RBP20.85■□□□□ 0.93
HMGN1-206ENST00000431390 PSTPIP2Q9H939 334 aa20.85■□□□□ 0.93
HMGN1-206ENST00000431390 PNMA2Q9UL42 364 aa20.85■□□□□ 0.93
HMGN1-206ENST00000431390 MYPNQ86TC9 1320 aa20.84■□□□□ 0.93
HMGN1-206ENST00000431390 A0A0G2JLL6 359 aaPredicted RBP20.84■□□□□ 0.93
HMGN1-206ENST00000431390 USP17L15C9J2P7 530 aa20.84■□□□□ 0.93
HMGN1-206ENST00000431390 USP17L13C9JLJ4 530 aa20.84■□□□□ 0.93
HMGN1-206ENST00000431390 USP17L11C9JVI0 530 aa20.84■□□□□ 0.93
HMGN1-206ENST00000431390 USP17L18D6R9N7 530 aa20.84■□□□□ 0.93
HMGN1-206ENST00000431390 USP17L22D6RA61 530 aa20.84■□□□□ 0.93
HMGN1-206ENST00000431390 USP17L17D6RBQ6 530 aa20.84■□□□□ 0.93
HMGN1-206ENST00000431390 USP17L19D6RCP7 530 aa20.84■□□□□ 0.93
HMGN1-206ENST00000431390 USP17L20D6RJB6 530 aa20.84■□□□□ 0.93
HMGN1-206ENST00000431390 IRF6O14896 467 aa20.84■□□□□ 0.93
HMGN1-206ENST00000431390 TRAK2O60296 914 aa20.84■□□□□ 0.93
HMGN1-206ENST00000431390 USP17L24Q0WX57 530 aa20.84■□□□□ 0.93
HMGN1-206ENST00000431390 STK38Q15208 465 aa20.84■□□□□ 0.93
HMGN1-206ENST00000431390 CATSPERGQ6ZRH7 1159 aa20.84■□□□□ 0.93
HMGN1-206ENST00000431390 PRRT2Q7Z6L0 340 aaPredicted RBP20.84■□□□□ 0.93
HMGN1-206ENST00000431390 KCNG4Q8TDN1 519 aa20.84■□□□□ 0.93
HMGN1-206ENST00000431390 OPTNQ96CV9 577 aa20.84■□□□□ 0.93
HMGN1-206ENST00000431390 SLC38A10Q9HBR0 1119 aa20.84■□□□□ 0.93
HMGN1-206ENST00000431390 FAM205CA6NFA0 338 aa20.83■□□□□ 0.92
HMGN1-206ENST00000431390 MBD3O95983 291 aa20.83■□□□□ 0.92
HMGN1-206ENST00000431390 SLC39A14Q15043 492 aa20.83■□□□□ 0.92
HMGN1-206ENST00000431390 SF3A1Q15459 793 aaKnown RBP20.83■□□□□ 0.92
HMGN1-206ENST00000431390 USH1GQ495M9 461 aa20.83■□□□□ 0.92
HMGN1-206ENST00000431390 CCDC174Q6PII3 467 aa20.83■□□□□ 0.92
HMGN1-206ENST00000431390 RASGRP4Q8TDF6 673 aa20.83■□□□□ 0.92
HMGN1-206ENST00000431390 ABCB11O95342 1321 aa20.82■□□□□ 0.92
HMGN1-206ENST00000431390 ICAM1P05362 532 aa20.82■□□□□ 0.92
HMGN1-206ENST00000431390 CLK2P49760 499 aaKnown RBP20.82■□□□□ 0.92
HMGN1-206ENST00000431390 COG2Q14746 738 aa20.82■□□□□ 0.92
HMGN1-206ENST00000431390 KLHL40Q2TBA0 621 aa20.82■□□□□ 0.92
HMGN1-206ENST00000431390 MCTP2Q6DN12 878 aa20.82■□□□□ 0.92
HMGN1-206ENST00000431390 SLC10A4Q96EP9 437 aa20.82■□□□□ 0.92
HMGN1-206ENST00000431390 CEP131Q9UPN4 1083 aa20.82■□□□□ 0.92
HMGN1-206ENST00000431390 DDX49Q9Y6V7 483 aaKnown RBP20.82■□□□□ 0.92
HMGN1-206ENST00000431390 MORC2Q9Y6X9 1032 aaPredicted RBP20.82■□□□□ 0.92
HMGN1-206ENST00000431390 RBBP6Q7Z6E9 1792 aaKnown RBP20.82■□□□□ 0.92
HMGN1-206ENST00000431390 SPTLC2O15270 562 aa20.81■□□□□ 0.92
HMGN1-206ENST00000431390 GADD45BO75293 160 aaPredicted RBP20.81■□□□□ 0.92
HMGN1-206ENST00000431390 BMP15O95972 392 aa20.81■□□□□ 0.92
HMGN1-206ENST00000431390 ALDH1A1P00352 501 aa20.81■□□□□ 0.92
HMGN1-206ENST00000431390 DSG3P32926 999 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms