RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 TIMP1P01033 207 aa16.43■□□□□ 0.22
SEC13-211ENST00000431352 SLC16A2P36021 539 aa16.43■□□□□ 0.22
SEC13-211ENST00000431352 HAND2P61296 217 aa16.43■□□□□ 0.22
SEC13-211ENST00000431352 TKFCQ3LXA3 575 aa16.43■□□□□ 0.22
SEC13-211ENST00000431352 TTBK2Q6IQ55 1244 aa16.43■□□□□ 0.22
SEC13-211ENST00000431352 CXCL17Q6UXB2 119 aa16.43■□□□□ 0.22
SEC13-211ENST00000431352 TLK2Q86UE8 772 aa16.43■□□□□ 0.22
SEC13-211ENST00000431352 MAFAQ8NHW3 353 aaPredicted RBP16.43■□□□□ 0.22
SEC13-211ENST00000431352 PURBQ96QR8 312 aaKnown RBP16.43■□□□□ 0.22
SEC13-211ENST00000431352 GPCPD1Q9NPB8 672 aa16.43■□□□□ 0.22
SEC13-211ENST00000431352 HELLSQ9NRZ9 838 aa16.43■□□□□ 0.22
SEC13-211ENST00000431352 ANAPC4Q9UJX5 808 aa16.43■□□□□ 0.22
SEC13-211ENST00000431352 TRIM6-TRIM34B2RNG4 842 aa16.42■□□□□ 0.22
SEC13-211ENST00000431352 ARVCFO00192 962 aa16.42■□□□□ 0.22
SEC13-211ENST00000431352 CTAGE5O15320 804 aa16.42■□□□□ 0.22
SEC13-211ENST00000431352 ORC4O43929 436 aa16.42■□□□□ 0.22
SEC13-211ENST00000431352 FOSL2P15408 326 aa16.42■□□□□ 0.22
SEC13-211ENST00000431352 NMIQ13287 307 aaPredicted RBP16.42■□□□□ 0.22
SEC13-211ENST00000431352 ZNF589Q86UQ0 364 aaPredicted RBP16.42■□□□□ 0.22
SEC13-211ENST00000431352 DCAF4Q8WV16 495 aa16.42■□□□□ 0.22
SEC13-211ENST00000431352 PDGFCQ9NRA1 345 aa16.42■□□□□ 0.22
SEC13-211ENST00000431352 CYP39A1Q9NYL5 469 aa16.42■□□□□ 0.22
SEC13-211ENST00000431352 TLR3O15455 904 aaKnown RBP16.41■□□□□ 0.22
SEC13-211ENST00000431352 PLA2G6O60733 806 aa16.41■□□□□ 0.22
SEC13-211ENST00000431352 FGAP02671 866 aa16.41■□□□□ 0.22
SEC13-211ENST00000431352 ICAM1P05362 532 aa16.41■□□□□ 0.22
SEC13-211ENST00000431352 ACRP10323 421 aa16.41■□□□□ 0.22
SEC13-211ENST00000431352 CSF2RAP15509 400 aa16.41■□□□□ 0.22
SEC13-211ENST00000431352 SMPD1P17405 629 aa16.41■□□□□ 0.22
SEC13-211ENST00000431352 CDK7P50613 346 aa16.41■□□□□ 0.22
SEC13-211ENST00000431352 FSCN1Q16658 493 aaKnown RBP16.41■□□□□ 0.22
SEC13-211ENST00000431352 MCMDC2Q4G0Z9 681 aa16.41■□□□□ 0.22
SEC13-211ENST00000431352 SYDE2Q5VT97 1194 aa16.41■□□□□ 0.22
SEC13-211ENST00000431352 MFSD5Q6N075 450 aa16.41■□□□□ 0.22
SEC13-211ENST00000431352 FAM126BQ8IXS8 530 aa16.41■□□□□ 0.22
SEC13-211ENST00000431352 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.41■□□□□ 0.228e-24■■■□□ 15.7
SEC13-211ENST00000431352 LNPKQ9C0E8 428 aa16.41■□□□□ 0.22
SEC13-211ENST00000431352 AP5M1Q9H0R1 490 aa16.41■□□□□ 0.22
SEC13-211ENST00000431352 DYNC1LI2O43237 492 aaPredicted RBP16.4■□□□□ 0.22
SEC13-211ENST00000431352 TOP1P11387 765 aaKnown RBP16.4■□□□□ 0.22
SEC13-211ENST00000431352 DNAJB2P25686 324 aa16.4■□□□□ 0.22
SEC13-211ENST00000431352 PPIGQ13427 754 aaKnown RBP eCLIP16.4■□□□□ 0.22
SEC13-211ENST00000431352 HDAC1Q13547 482 aaPredicted RBP16.4■□□□□ 0.22
SEC13-211ENST00000431352 ALX1Q15699 326 aa16.4■□□□□ 0.22
SEC13-211ENST00000431352 TMEM63BQ5T3F8 832 aa16.4■□□□□ 0.22
SEC13-211ENST00000431352 RILPL2Q969X0 211 aa16.4■□□□□ 0.22
SEC13-211ENST00000431352 TMEM47Q9BQJ4 181 aa16.4■□□□□ 0.22
SEC13-211ENST00000431352 COL25A1Q9BXS0 654 aaPredicted RBP16.4■□□□□ 0.22
SEC13-211ENST00000431352 RANBP17Q9H2T7 1088 aaKnown RBP16.4■□□□□ 0.22
SEC13-211ENST00000431352 GNEQ9Y223 722 aaKnown RBP16.4■□□□□ 0.22
SEC13-211ENST00000431352 UNC80Q8N2C7 3258 aa16.39■□□□□ 0.21
SEC13-211ENST00000431352 PTPDC1A2A3K4 754 aa16.39■□□□□ 0.21
SEC13-211ENST00000431352 NFIBO00712 420 aa16.39■□□□□ 0.21
SEC13-211ENST00000431352 HSPD1P10809 573 aaKnown RBP16.39■□□□□ 0.21
SEC13-211ENST00000431352 CYP2C18P33260 490 aa16.39■□□□□ 0.21
SEC13-211ENST00000431352 BAATQ14032 418 aaPredicted RBP16.39■□□□□ 0.21
SEC13-211ENST00000431352 B4GALNT3Q6L9W6 998 aa16.39■□□□□ 0.21
SEC13-211ENST00000431352 TMEM199Q8N511 208 aa16.39■□□□□ 0.21
SEC13-211ENST00000431352 YTHDC1Q96MU7 727 aaKnown RBP16.39■□□□□ 0.21
SEC13-211ENST00000431352 CCDC171Q6TFL3 1326 aa16.39■□□□□ 0.21
SEC13-211ENST00000431352 LCTP09848 1927 aa16.39■□□□□ 0.21
SEC13-211ENST00000431352 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.38■□□□□ 0.21
SEC13-211ENST00000431352 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.38■□□□□ 0.21
SEC13-211ENST00000431352 FGRP09769 529 aa16.38■□□□□ 0.21
SEC13-211ENST00000431352 CALML3P27482 149 aa16.38■□□□□ 0.21
SEC13-211ENST00000431352 PSMC6P62333 389 aa16.38■□□□□ 0.21
SEC13-211ENST00000431352 TMEM240Q5SV17 173 aa16.38■□□□□ 0.21
SEC13-211ENST00000431352 TAPT1Q6NXT6 567 aa16.38■□□□□ 0.21
SEC13-211ENST00000431352 SLC30A10Q6XR72 485 aa16.38■□□□□ 0.21
SEC13-211ENST00000431352 KIAA1211Q6ZU35 1233 aa16.38■□□□□ 0.21
SEC13-211ENST00000431352 C16orf59Q7L2K0 433 aa16.38■□□□□ 0.21
SEC13-211ENST00000431352 TBC1D10CQ8IV04 446 aa16.38■□□□□ 0.21
SEC13-211ENST00000431352 VTA1Q9NP79 307 aa16.38■□□□□ 0.21
SEC13-211ENST00000431352 TMEM265A0A087WTH1 108 aa16.37■□□□□ 0.21
SEC13-211ENST00000431352 GRXCR1A8MXD5 290 aa16.37■□□□□ 0.21
SEC13-211ENST00000431352 ZEB2O60315 1214 aa16.37■□□□□ 0.21
SEC13-211ENST00000431352 NOVP48745 357 aa16.37■□□□□ 0.21
SEC13-211ENST00000431352 ALDH5A1P51649 535 aaPredicted RBP16.37■□□□□ 0.21
SEC13-211ENST00000431352 NKX3-2P78367 333 aa16.37■□□□□ 0.21
SEC13-211ENST00000431352 ITGA7Q13683 1181 aa16.37■□□□□ 0.21
SEC13-211ENST00000431352 GRIN2CQ14957 1233 aa16.37■□□□□ 0.21
SEC13-211ENST00000431352 PSRC1Q6PGN9 363 aaPredicted RBP16.37■□□□□ 0.21
SEC13-211ENST00000431352 MFSD6Q6ZSS7 791 aa16.37■□□□□ 0.21
SEC13-211ENST00000431352 TIFAQ96CG3 184 aa16.37■□□□□ 0.21
SEC13-211ENST00000431352 TRPV6Q9H1D0 765 aa16.37■□□□□ 0.21
SEC13-211ENST00000431352 HIPK3Q9H422 1215 aa16.37■□□□□ 0.21
SEC13-211ENST00000431352 ZMYM6O95789 1325 aa16.37■□□□□ 0.21
SEC13-211ENST00000431352 UMODL1Q5DID0 1318 aa16.37■□□□□ 0.21
SEC13-211ENST00000431352 CABYRO75952 493 aa16.36■□□□□ 0.21
SEC13-211ENST00000431352 CD4P01730 458 aa16.36■□□□□ 0.21
SEC13-211ENST00000431352 PDHBP11177 359 aa16.36■□□□□ 0.21
SEC13-211ENST00000431352 PBX2P40425 430 aa16.36■□□□□ 0.21
SEC13-211ENST00000431352 AKNAD1Q5T1N1 836 aa16.36■□□□□ 0.21
SEC13-211ENST00000431352 IQSEC1Q6DN90 963 aa16.36■□□□□ 0.21
SEC13-211ENST00000431352 BTNL9Q6UXG8 535 aa16.36■□□□□ 0.21
SEC13-211ENST00000431352 ZNF365Q70YC5 407 aa16.36■□□□□ 0.21
SEC13-211ENST00000431352 ZKSCAN3Q9BRR0 538 aa16.36■□□□□ 0.21
SEC13-211ENST00000431352 ADD3Q9UEY8 706 aaKnown RBP16.36■□□□□ 0.21
SEC13-211ENST00000431352 GRIN2DO15399 1336 aa16.36■□□□□ 0.21
SEC13-211ENST00000431352 NEDD4P46934 1319 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms