RNA–Protein interactions for RNA: ENST00000430317.2

COL6A4P2-201, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 3

Gene COL6A4P2, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-201ENST00000430317 VEGFBP49765 207 aa10.28□□□□□ -0.76
COL6A4P2-201ENST00000430317 MAP2K1Q02750 393 aaPredicted RBP10.28□□□□□ -0.76
COL6A4P2-201ENST00000430317 IFFO2Q5TF58 517 aa10.28□□□□□ -0.76
COL6A4P2-201ENST00000430317 CCAR1Q8IX12 1150 aaKnown RBP10.28□□□□□ -0.76
COL6A4P2-201ENST00000430317 SHCBP1Q8NEM2 672 aa10.28□□□□□ -0.76
COL6A4P2-201ENST00000430317 CHST13Q8NET6 341 aa10.28□□□□□ -0.76
COL6A4P2-201ENST00000430317 GPRC5AQ8NFJ5 357 aa10.28□□□□□ -0.76
COL6A4P2-201ENST00000430317 P2RX7Q99572 595 aaKnown RBP10.28□□□□□ -0.76
COL6A4P2-201ENST00000430317 BEGAINQ9BUH8 593 aa10.28□□□□□ -0.76
COL6A4P2-201ENST00000430317 CFHR5Q9BXR6 569 aa10.28□□□□□ -0.76
COL6A4P2-201ENST00000430317 C6orf50Q9HD87 102 aa10.28□□□□□ -0.76
COL6A4P2-201ENST00000430317 SAGE1Q9NXZ1 904 aa10.28□□□□□ -0.76
COL6A4P2-201ENST00000430317 MAP3K20Q9NYL2 800 aaKnown RBP10.28□□□□□ -0.76
COL6A4P2-201ENST00000430317 MORF4L1Q9UBU8 362 aa10.28□□□□□ -0.76
COL6A4P2-201ENST00000430317 ZNF214Q9UL59 606 aaPredicted RBP10.28□□□□□ -0.76
COL6A4P2-201ENST00000430317 RLFQ13129 1914 aa10.28□□□□□ -0.76
COL6A4P2-201ENST00000430317 RBBP6Q7Z6E9 1792 aaKnown RBP10.28□□□□□ -0.76
COL6A4P2-201ENST00000430317 TLR2O60603 784 aa10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 STAT3P40763 770 aa10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 MRPL12P52815 198 aaKnown RBP10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 NLRP5P59047 1200 aa10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 GNL2Q13823 731 aaKnown RBP10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 PLS1Q14651 629 aa10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 PKN1Q16512 942 aa10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 LARP1BQ659C4 914 aaKnown RBP10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 WWC2Q6AWC2 1192 aa10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 SNRNP48Q6IEG0 339 aaKnown RBP10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 CCDC174Q6PII3 467 aa10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 RIOX2Q8IUF8 465 aa10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 CPXCR1Q8N123 301 aa10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 REPS2Q8NFH8 660 aa10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 CUL5Q93034 780 aa10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 PTPN18Q99952 460 aa10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 PAGR1Q9BTK6 254 aa10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 SPATC1LQ9H0A9 340 aa10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 CPVLQ9H3G5 476 aa10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 MROH8Q9H579 483 aa10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 ACAD9Q9H845 621 aa10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 EHMT1Q9H9B1 1298 aa10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 CIZ1Q9ULV3 898 aaPredicted RBP10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 PFASO15067 1338 aa10.27□□□□□ -0.77
COL6A4P2-201ENST00000430317 STXBP3O00186 592 aa10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 CYP2C8P10632 490 aa10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 ALAS1P13196 640 aa10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 FDPSP14324 419 aaKnown RBP10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 MAPK4P31152 587 aa10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 ADCY7P51828 1080 aa10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 ERVK-9P63128 1117 aa10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 ERVK-24P63145 666 aa10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 NUCB2P80303 420 aa10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 TMEM132BQ14DG7 1078 aa10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 SLC35G1Q2M3R5 365 aa10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 USH1GQ495M9 461 aa10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 DAGLBQ8NCG7 672 aa10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 FBXO18Q8NFZ0 1043 aa10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 PIBF1Q8WXW3 757 aa10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 ZMYND12Q9H0C1 365 aa10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 RAVER2Q9HCJ3 691 aaKnown RBP10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 RNF146Q9NTX7 359 aa10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 IVNS1ABPQ9Y6Y0 642 aa10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 ZNF536O15090 1300 aa10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 COL11A1P12107 1806 aaPredicted RBP10.26□□□□□ -0.77
COL6A4P2-201ENST00000430317 hCG_1642624A0A1W2PR95 340 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 PIK3CDO00329 1044 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 STX6O43752 255 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 AOC2O75106 756 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 FOSP01100 380 aaPredicted RBP10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 MMP1P03956 469 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 KRT2P35908 639 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 GHRHRQ02643 423 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 CRHR2Q13324 411 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 AP3B2Q13367 1082 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 KIF22Q14807 665 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 ARHGEF6Q15052 776 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 NOM1Q5C9Z4 860 aaKnown RBP10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 KRT40Q6A162 431 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 REXO1Q8N1G1 1221 aaKnown RBP10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 ANKRD13CQ8N6S4 541 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 GPKOWQ92917 476 aaPredicted RBP eCLIP10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 TRERF1Q96PN7 1200 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 MPHOSPH6Q99547 160 aaKnown RBP10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 PHF20Q9BVI0 1012 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 PSTPIP2Q9H939 334 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 RIC8AQ9NPQ8 531 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 FOXD4L1Q9NU39 408 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 VPS54Q9P1Q0 977 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 PCDHA4Q9UN74 947 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 ATP6V1DQ9Y5K8 247 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 ADGRA2Q96PE1 1338 aa10.25□□□□□ -0.77
COL6A4P2-201ENST00000430317 BAZ2BQ9UIF8 2168 aaKnown RBP10.24□□□□□ -0.77
COL6A4P2-201ENST00000430317 VPS37CA5D8V6 355 aaPredicted RBP10.24□□□□□ -0.77
COL6A4P2-201ENST00000430317 SMCO2A6NFE2 343 aa10.24□□□□□ -0.77
COL6A4P2-201ENST00000430317 SPDYE3A6NKU9 549 aa10.24□□□□□ -0.77
COL6A4P2-201ENST00000430317 B4DLN1 442 aa10.24□□□□□ -0.77
COL6A4P2-201ENST00000430317 GCOM1H8Y6P7 765 aaPredicted RBP10.24□□□□□ -0.77
COL6A4P2-201ENST00000430317 STRNO43815 780 aa10.24□□□□□ -0.77
COL6A4P2-201ENST00000430317 PPP1R11O60927 126 aaPredicted RBP10.24□□□□□ -0.77
COL6A4P2-201ENST00000430317 PPFIA3O75145 1194 aa10.24□□□□□ -0.77
COL6A4P2-201ENST00000430317 POLR2MP0CAP2 368 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms