RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 CABYRO75952 493 aa17.57■□□□□ 0.4
MSH5-208ENST00000429846 FGAP02671 866 aa17.57■□□□□ 0.4
MSH5-208ENST00000429846 TOP1P11387 765 aaKnown RBP17.57■□□□□ 0.4
MSH5-208ENST00000429846 EPHB4P54760 987 aa17.57■□□□□ 0.4
MSH5-208ENST00000429846 PWP2Q15269 919 aaKnown RBP17.57■□□□□ 0.4
MSH5-208ENST00000429846 MFSD5Q6N075 450 aa17.57■□□□□ 0.4
MSH5-208ENST00000429846 BTNL9Q6UXG8 535 aa17.57■□□□□ 0.4
MSH5-208ENST00000429846 TLK2Q86UE8 772 aa17.57■□□□□ 0.4
MSH5-208ENST00000429846 VTI1AQ96AJ9 217 aa17.57■□□□□ 0.4
MSH5-208ENST00000429846 FAM227BQ96M60 508 aa17.57■□□□□ 0.4
MSH5-208ENST00000429846 SEZ6LQ9BYH1 1024 aa17.57■□□□□ 0.4
MSH5-208ENST00000429846 SEMA6BQ9H3T3 888 aa17.57■□□□□ 0.4
MSH5-208ENST00000429846 PNMA2Q9UL42 364 aa17.57■□□□□ 0.4
MSH5-208ENST00000429846 GNEQ9Y223 722 aaKnown RBP17.57■□□□□ 0.4
MSH5-208ENST00000429846 LAMA4Q16363 1823 aa17.56■□□□□ 0.4
MSH5-208ENST00000429846 CCDC171Q6TFL3 1326 aa17.56■□□□□ 0.4
MSH5-208ENST00000429846 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.56■□□□□ 0.4
MSH5-208ENST00000429846 CTAGE5O15320 804 aa17.56■□□□□ 0.4
MSH5-208ENST00000429846 HSPD1P10809 573 aaKnown RBP17.56■□□□□ 0.4
MSH5-208ENST00000429846 MFAP1P55081 439 aaKnown RBP17.56■□□□□ 0.4
MSH5-208ENST00000429846 IRX5P78411 483 aaPredicted RBP17.56■□□□□ 0.4
MSH5-208ENST00000429846 PPIGQ13427 754 aaKnown RBP eCLIP17.56■□□□□ 0.41e-6■■■□□ 18.5
MSH5-208ENST00000429846 MUM1L1Q5H9M0 696 aa17.56■□□□□ 0.4
MSH5-208ENST00000429846 NOL8Q76FK4 1167 aaKnown RBP17.56■□□□□ 0.4
MSH5-208ENST00000429846 RASGRP2Q7LDG7 609 aa17.56■□□□□ 0.4
MSH5-208ENST00000429846 FAM126BQ8IXS8 530 aa17.56■□□□□ 0.4
MSH5-208ENST00000429846 CHMP4CQ96CF2 233 aa17.56■□□□□ 0.4
MSH5-208ENST00000429846 CDX2Q99626 313 aaPredicted RBP17.56■□□□□ 0.4
MSH5-208ENST00000429846 VTA1Q9NP79 307 aa17.56■□□□□ 0.4
MSH5-208ENST00000429846 Q9Y3F1 56 aa17.56■□□□□ 0.4
MSH5-208ENST00000429846 ASTN1O14525 1302 aa17.55■□□□□ 0.4
MSH5-208ENST00000429846 ZEB2O60315 1214 aa17.55■□□□□ 0.4
MSH5-208ENST00000429846 NT5C2P49902 561 aa17.55■□□□□ 0.4
MSH5-208ENST00000429846 RRP12Q5JTH9 1297 aaKnown RBP17.55■□□□□ 0.4
MSH5-208ENST00000429846 NSMFQ6X4W1 530 aa17.55■□□□□ 0.4
MSH5-208ENST00000429846 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.55■□□□□ 0.4
MSH5-208ENST00000429846 MORC4Q8TE76 937 aa17.55■□□□□ 0.4
MSH5-208ENST00000429846 TMEM47Q9BQJ4 181 aa17.55■□□□□ 0.4
MSH5-208ENST00000429846 AP5M1Q9H0R1 490 aa17.55■□□□□ 0.4
MSH5-208ENST00000429846 TTYH1Q9H313 450 aaPredicted RBP17.55■□□□□ 0.4
MSH5-208ENST00000429846 ADD3Q9UEY8 706 aaKnown RBP17.55■□□□□ 0.4
MSH5-208ENST00000429846 MTMR7Q9Y216 660 aa17.55■□□□□ 0.4
MSH5-208ENST00000429846 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.54■□□□□ 0.4
MSH5-208ENST00000429846 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.54■□□□□ 0.4
MSH5-208ENST00000429846 TRIM6-TRIM34B2RNG4 842 aa17.54■□□□□ 0.4
MSH5-208ENST00000429846 SNAP25P60880 206 aa17.54■□□□□ 0.4
MSH5-208ENST00000429846 BEX3Q00994 111 aa17.54■□□□□ 0.4
MSH5-208ENST00000429846 NMIQ13287 307 aaPredicted RBP17.54■□□□□ 0.4
MSH5-208ENST00000429846 FSCN1Q16658 493 aaKnown RBP17.54■□□□□ 0.4
MSH5-208ENST00000429846 SYDE2Q5VT97 1194 aa17.54■□□□□ 0.4
MSH5-208ENST00000429846 IQSEC1Q6DN90 963 aa17.54■□□□□ 0.4
MSH5-208ENST00000429846 ZNF589Q86UQ0 364 aaPredicted RBP17.54■□□□□ 0.4
MSH5-208ENST00000429846 TMEM199Q8N511 208 aa17.54■□□□□ 0.4
MSH5-208ENST00000429846 SLC43A3Q8NBI5 491 aa17.54■□□□□ 0.4
MSH5-208ENST00000429846 TTC14Q96N46 770 aa17.54■□□□□ 0.4
MSH5-208ENST00000429846 RNF41Q9H4P4 317 aaPredicted RBP17.54■□□□□ 0.4
MSH5-208ENST00000429846 CD4P01730 458 aa17.53■□□□□ 0.4
MSH5-208ENST00000429846 PDHBP11177 359 aa17.53■□□□□ 0.4
MSH5-208ENST00000429846 SMPD1P17405 629 aa17.53■□□□□ 0.4
MSH5-208ENST00000429846 AKNAD1Q5T1N1 836 aa17.53■□□□□ 0.4
MSH5-208ENST00000429846 TAPT1Q6NXT6 567 aa17.53■□□□□ 0.4
MSH5-208ENST00000429846 PSRC1Q6PGN9 363 aaPredicted RBP17.53■□□□□ 0.4
MSH5-208ENST00000429846 MFSD6Q6ZSS7 791 aa17.53■□□□□ 0.4
MSH5-208ENST00000429846 FBXO16Q8IX29 292 aaPredicted RBP17.53■□□□□ 0.4
MSH5-208ENST00000429846 SMC5Q8IY18 1101 aa17.53■□□□□ 0.4
MSH5-208ENST00000429846 LNPKQ9C0E8 428 aa17.53■□□□□ 0.4
MSH5-208ENST00000429846 WDR19Q8NEZ3 1342 aa17.52■□□□□ 0.4
MSH5-208ENST00000429846 DNAJB2P25686 324 aa17.52■□□□□ 0.4
MSH5-208ENST00000429846 SLC16A2P36021 539 aa17.52■□□□□ 0.4
MSH5-208ENST00000429846 TTBK2Q6IQ55 1244 aa17.52■□□□□ 0.4
MSH5-208ENST00000429846 CXCL17Q6UXB2 119 aa17.52■□□□□ 0.4
MSH5-208ENST00000429846 MAFAQ8NHW3 353 aaPredicted RBP17.52■□□□□ 0.4
MSH5-208ENST00000429846 RILPL2Q969X0 211 aa17.52■□□□□ 0.4
MSH5-208ENST00000429846 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.52■□□□□ 0.42e-6■■□□□ 13.8
MSH5-208ENST00000429846 RWDD1Q9H446 243 aaPredicted RBP17.52■□□□□ 0.4
MSH5-208ENST00000429846 FRMPD2Q68DX3 1309 aaPredicted RBP17.51■□□□□ 0.39
MSH5-208ENST00000429846 SNHG28P0DPA3 235 aa17.51■□□□□ 0.39
MSH5-208ENST00000429846 FOSL2P15408 326 aa17.51■□□□□ 0.39
MSH5-208ENST00000429846 CSF2RAP15509 400 aa17.51■□□□□ 0.39
MSH5-208ENST00000429846 ALDH5A1P51649 535 aaPredicted RBP17.51■□□□□ 0.39
MSH5-208ENST00000429846 HAND2P61296 217 aa17.51■□□□□ 0.39
MSH5-208ENST00000429846 ZNF543Q08ER8 600 aa17.51■□□□□ 0.39
MSH5-208ENST00000429846 ITGA7Q13683 1181 aa17.51■□□□□ 0.39
MSH5-208ENST00000429846 BAATQ14032 418 aaPredicted RBP17.51■□□□□ 0.39
MSH5-208ENST00000429846 DUSP28Q4G0W2 176 aa17.51■□□□□ 0.39
MSH5-208ENST00000429846 GPATCH4Q5T3I0 446 aaKnown RBP17.51■□□□□ 0.39
MSH5-208ENST00000429846 EEPD1Q7L9B9 569 aa17.51■□□□□ 0.39
MSH5-208ENST00000429846 ESR2Q92731 530 aa17.51■□□□□ 0.39
MSH5-208ENST00000429846 MPHOSPH6Q99547 160 aaKnown RBP17.51■□□□□ 0.39
MSH5-208ENST00000429846 PPP1R12CQ9BZL4 782 aa17.51■□□□□ 0.39
MSH5-208ENST00000429846 OSBPL3Q9H4L5 887 aa17.51■□□□□ 0.39
MSH5-208ENST00000429846 GPCPD1Q9NPB8 672 aa17.51■□□□□ 0.39
MSH5-208ENST00000429846 PDGFCQ9NRA1 345 aa17.51■□□□□ 0.39
MSH5-208ENST00000429846 PTPDC1A2A3K4 754 aa17.5■□□□□ 0.39
MSH5-208ENST00000429846 NFIBO00712 420 aa17.5■□□□□ 0.39
MSH5-208ENST00000429846 DYNC1LI2O43237 492 aaPredicted RBP17.5■□□□□ 0.39
MSH5-208ENST00000429846 SDSP20132 328 aa17.5■□□□□ 0.39
MSH5-208ENST00000429846 TMEM240Q5SV17 173 aa17.5■□□□□ 0.39
MSH5-208ENST00000429846 RASIP1Q5U651 963 aa17.5■□□□□ 0.39
MSH5-208ENST00000429846 KIAA1211Q6ZU35 1233 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms