RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 CCDC194A0A1B0GVG4 234 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 RGS16O15492 202 aaPredicted RBP8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 ATP5JP18859 108 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 DDIT3P35638 169 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 ADALQ6DHV7 355 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 GUCA1BQ9UMX6 200 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 SLC4A7Q9Y6M7 1214 aa8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 PPRC1Q5VV67 1664 aaKnown RBP8.24□□□□□ -1.09
SYNPO2-202ENST00000429713 SNRPA1P09661 255 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 MYO1EQ12965 1108 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 PSMD2Q13200 908 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 RINLQ6ZS11 566 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 VPS52Q8N1B4 723 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 FOXO3O43524 673 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 KRT71Q3SY84 523 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 UBL4BQ8N7F7 174 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 CASP10Q92851 521 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 PARD6BQ9BYG5 372 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 MYH14Q7Z406 1995 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 CCDC188H7C350 402 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 ATP5BP06576 529 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 FNTAP49354 379 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 ATP6V0A1Q93050 837 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 SH2D4AQ9H788 454 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 ANKIB1Q9P2G1 1089 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 ATP8A1Q9Y2Q0 1164 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 SHPRHQ149N8 1683 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 TBKBP1A7MCY6 615 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 KRT6AP02538 564 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 KRT6BP04259 564 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 CYP2E1P05181 493 aaPredicted RBP8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 EEF1GP26641 437 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 PLA2R1Q13018 1463 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 PDLIM1O00151 329 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 CHL1O00533 1208 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 CUTAO60888 179 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 RTN3O95197 1032 aaPredicted RBP8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 HNRNPCP07910 306 aaKnown RBP eCLIP8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 KRT5P13647 590 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 ITIH4Q14624 930 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 AKAP4Q5JQC9 854 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 ATAD3BQ5T9A4 648 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 POLR2DO15514 142 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 CLASP2O75122 1294 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 CWF19L2Q2TBE0 894 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 JARID2Q92833 1246 aaPredicted RBP8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 ZFRQ96KR1 1074 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 USP40Q9NVE5 1235 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 TMOD3Q9NYL9 352 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 COMMD3-BMI1R4GMX3 469 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 TSPY2A6NKD2 308 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 TSPY3P0CV98 308 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 TSPY8P0CW00 308 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 TSPY1Q01534 308 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 STRN3Q13033 797 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 KBTBD12Q3ZCT8 623 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 ARHGEF18Q6ZSZ5 1173 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 KRI1Q8N9T8 703 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 DRAXINQ8NBI3 349 aaPredicted RBP8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 TEKT4Q8WW24 435 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 SNRKQ9NRH2 765 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 HELLSQ9NRZ9 838 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 IBSPP21815 317 aaPredicted RBP8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 HVCN1Q96D96 273 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 TMED5Q9Y3A6 229 aa8.23□□□□□ -1.09
SYNPO2-202ENST00000429713 LRMPQ12912 555 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 ANKRD20A8PQ5CZ79 823 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 LDHAL6AQ6ZMR3 332 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 EXOC8Q8IYI6 725 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 LRRC43Q8N309 656 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 KIFC3Q9BVG8 833 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 SYNRGQ9UMZ2 1314 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 NLRP1Q9C000 1473 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 GHRP10912 638 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 HNRNPH1P31943 449 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 DDI1Q8WTU0 396 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 OSBPL1AQ9BXW6 950 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 POLR3EQ9NVU0 708 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 SMIM31A0A1B0GVY4 71 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 EPB41P11171 864 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 RRAGBQ5VZM2 374 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 ARMCX6Q7L4S7 300 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 USP37Q86T82 979 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 CDK12Q9NYV4 1490 aaPredicted RBP8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 ARHGAP4P98171 946 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 TBCCQ15814 346 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 PPP1R2P3Q6NXS1 205 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 KIRREL3Q8IZU9 778 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 VPS50Q96JG6 964 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 EFHD1Q9BUP0 239 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 CCDC153Q494R4 210 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 VSTM4Q8IW00 320 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 MAB21L3Q8N8X9 362 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 TMEM60Q9H2L4 133 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 TFCP2Q12800 502 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 FAM173BQ6P4H8 233 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 FERMT2Q96AC1 680 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 VTI1AQ96AJ9 217 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 DHX58Q96C10 678 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms