RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 SLC38A10Q9HBR0 1119 aa12.44□□□□□ -0.42
CRIM1-204ENST00000428774 C6orf50Q9HD87 102 aa12.44□□□□□ -0.42
CRIM1-204ENST00000428774 RIC8AQ9NPQ8 531 aa12.44□□□□□ -0.42
CRIM1-204ENST00000428774 TMEM260Q9NX78 707 aa12.44□□□□□ -0.42
CRIM1-204ENST00000428774 PCDHA6Q9UN73 950 aa12.44□□□□□ -0.42
CRIM1-204ENST00000428774 PCDHA8Q9Y5H6 950 aa12.44□□□□□ -0.42
CRIM1-204ENST00000428774 LRRC37A2A6NM11 1700 aa12.44□□□□□ -0.42
CRIM1-204ENST00000428774 DDX11L8A8MPP1 907 aa12.43□□□□□ -0.42
CRIM1-204ENST00000428774 WNT7AO00755 349 aa12.43□□□□□ -0.42
CRIM1-204ENST00000428774 ICAM1P05362 532 aa12.43□□□□□ -0.42
CRIM1-204ENST00000428774 CLK2P49760 499 aaKnown RBP12.43□□□□□ -0.42
CRIM1-204ENST00000428774 TOB1P50616 345 aaPredicted RBP12.43□□□□□ -0.42
CRIM1-204ENST00000428774 NBR1Q14596 966 aa12.43□□□□□ -0.42
CRIM1-204ENST00000428774 UBE2SQ16763 222 aa12.43□□□□□ -0.42
CRIM1-204ENST00000428774 GPAT2Q6NUI2 795 aa12.43□□□□□ -0.42
CRIM1-204ENST00000428774 PIK3AP1Q6ZUJ8 805 aa12.43□□□□□ -0.42
CRIM1-204ENST00000428774 REXO1Q8N1G1 1221 aaKnown RBP12.43□□□□□ -0.42
CRIM1-204ENST00000428774 ZNF396Q96N95 335 aaPredicted RBP12.43□□□□□ -0.42
CRIM1-204ENST00000428774 TFIP11Q9UBB9 837 aaKnown RBP12.43□□□□□ -0.42
CRIM1-204ENST00000428774 ADAMTS5Q9UNA0 930 aa12.43□□□□□ -0.42
CRIM1-204ENST00000428774 AGTPBP1Q9UPW5 1226 aa12.43□□□□□ -0.42
CRIM1-204ENST00000428774 ABCB11O95342 1321 aa12.42□□□□□ -0.42
CRIM1-204ENST00000428774 VWA5AO00534 786 aa12.42□□□□□ -0.42
CRIM1-204ENST00000428774 GNA11P29992 359 aa12.42□□□□□ -0.42
CRIM1-204ENST00000428774 NASPP49321 788 aaPredicted RBP12.42□□□□□ -0.42
CRIM1-204ENST00000428774 CEBPZQ03701 1054 aaKnown RBP12.42□□□□□ -0.42
CRIM1-204ENST00000428774 SNAPC2Q13487 334 aa12.42□□□□□ -0.42
CRIM1-204ENST00000428774 JAKMIP3Q5VZ66 844 aa12.42□□□□□ -0.42
CRIM1-204ENST00000428774 DNAJC5GQ8N7S2 189 aa12.42□□□□□ -0.42
CRIM1-204ENST00000428774 LEO1Q8WVC0 666 aaPredicted RBP12.42□□□□□ -0.42
CRIM1-204ENST00000428774 BRI3BPQ8WY22 251 aa12.42□□□□□ -0.42
CRIM1-204ENST00000428774 CUL5Q93034 780 aa12.42□□□□□ -0.42
CRIM1-204ENST00000428774 MS4A4AQ96JQ5 239 aa12.42□□□□□ -0.42
CRIM1-204ENST00000428774 PGBD1Q96JS3 809 aa12.42□□□□□ -0.42
CRIM1-204ENST00000428774 AGBL1Q96MI9 1066 aa12.42□□□□□ -0.42
CRIM1-204ENST00000428774 RAVER2Q9HCJ3 691 aaKnown RBP12.42□□□□□ -0.42
CRIM1-204ENST00000428774 LMBRD1Q9NUN5 540 aa12.42□□□□□ -0.42
CRIM1-204ENST00000428774 POLR3EQ9NVU0 708 aa12.42□□□□□ -0.42
CRIM1-204ENST00000428774 BIN2Q9UBW5 565 aaPredicted RBP12.42□□□□□ -0.42
CRIM1-204ENST00000428774 CCPG1Q9ULG6 757 aa12.42□□□□□ -0.42
CRIM1-204ENST00000428774 CLIC4Q9Y696 253 aa12.42□□□□□ -0.42
CRIM1-204ENST00000428774 PLXNB2O15031 1838 aa12.41□□□□□ -0.42
CRIM1-204ENST00000428774 CCDC194A0A1B0GVG4 234 aa12.41□□□□□ -0.42
CRIM1-204ENST00000428774 GOLGA6L22H0YM25 854 aa12.41□□□□□ -0.42
CRIM1-204ENST00000428774 MEIS2O14770 477 aa12.41□□□□□ -0.42
CRIM1-204ENST00000428774 ZBED4O75132 1171 aa12.41□□□□□ -0.42
CRIM1-204ENST00000428774 ZBTB48P10074 688 aaPredicted RBP12.41□□□□□ -0.42
CRIM1-204ENST00000428774 FDX1P10109 184 aa12.41□□□□□ -0.42
CRIM1-204ENST00000428774 HOXA7P31268 230 aaPredicted RBP12.41□□□□□ -0.42
CRIM1-204ENST00000428774 COG2Q14746 738 aa12.41□□□□□ -0.42
CRIM1-204ENST00000428774 PTPAQ15257 358 aa12.41□□□□□ -0.42
CRIM1-204ENST00000428774 RILPL1Q5EBL4 403 aa12.41□□□□□ -0.42
CRIM1-204ENST00000428774 ANO1Q5XXA6 986 aa12.41□□□□□ -0.42
CRIM1-204ENST00000428774 ATL3Q6DD88 541 aa12.41□□□□□ -0.42
CRIM1-204ENST00000428774 POTEEQ6S8J3 1075 aa12.41□□□□□ -0.42
CRIM1-204ENST00000428774 KRT25Q7Z3Z0 450 aa12.41□□□□□ -0.42
CRIM1-204ENST00000428774 CPXCR1Q8N123 301 aa12.41□□□□□ -0.42
CRIM1-204ENST00000428774 BICD2Q8TD16 824 aa12.41□□□□□ -0.42
CRIM1-204ENST00000428774 SPATA32Q96LK8 384 aa12.41□□□□□ -0.42
CRIM1-204ENST00000428774 P2RX7Q99572 595 aaKnown RBP12.41□□□□□ -0.42
CRIM1-204ENST00000428774 PTPN18Q99952 460 aa12.41□□□□□ -0.42
CRIM1-204ENST00000428774 ASCC2Q9H1I8 757 aaPredicted RBP12.41□□□□□ -0.42
CRIM1-204ENST00000428774 RTEL1Q9NZ71 1219 aa12.41□□□□□ -0.42
CRIM1-204ENST00000428774 ZNF214Q9UL59 606 aaPredicted RBP12.41□□□□□ -0.42
CRIM1-204ENST00000428774 NOL7Q9UMY1 257 aaKnown RBP12.41□□□□□ -0.42
CRIM1-204ENST00000428774 PCDHB6Q9Y5E3 794 aa12.41□□□□□ -0.42
CRIM1-204ENST00000428774 ZSWIM8A7E2V4 1837 aa12.41□□□□□ -0.42
CRIM1-204ENST00000428774 ELP1O95163 1332 aa12.4□□□□□ -0.42
CRIM1-204ENST00000428774 CCL15-CCL14A0A0B4J2E2 113 aa12.4□□□□□ -0.42
CRIM1-204ENST00000428774 IGF2BP3O00425 579 aaKnown RBP eCLIP12.4□□□□□ -0.42
CRIM1-204ENST00000428774 PRPF40AO75400 957 aaKnown RBP12.4□□□□□ -0.42
CRIM1-204ENST00000428774 YEATS4O95619 227 aa12.4□□□□□ -0.42
CRIM1-204ENST00000428774 IRX3P78415 501 aaPredicted RBP12.4□□□□□ -0.42
CRIM1-204ENST00000428774 TRAF1Q13077 416 aa12.4□□□□□ -0.42
CRIM1-204ENST00000428774 TMEM132BQ14DG7 1078 aa12.4□□□□□ -0.42
CRIM1-204ENST00000428774 NONOQ15233 471 aaKnown RBP eCLIP12.4□□□□□ -0.42
CRIM1-204ENST00000428774 SF3A1Q15459 793 aaKnown RBP12.4□□□□□ -0.42
CRIM1-204ENST00000428774 CCL15Q16663 113 aa12.4□□□□□ -0.42
CRIM1-204ENST00000428774 INF2Q27J81 1249 aa12.4□□□□□ -0.42
CRIM1-204ENST00000428774 TTC38Q5R3I4 469 aa12.4□□□□□ -0.42
CRIM1-204ENST00000428774 USP17L6PQ6QN14 398 aa12.4□□□□□ -0.42
CRIM1-204ENST00000428774 FASTKD5Q7L8L6 764 aaKnown RBP12.4□□□□□ -0.42
CRIM1-204ENST00000428774 LINC00301Q8NCQ3 95 aa12.4□□□□□ -0.42
CRIM1-204ENST00000428774 CLEC4DQ8WXI8 215 aa12.4□□□□□ -0.42
CRIM1-204ENST00000428774 CCDC102AQ96A19 550 aa12.4□□□□□ -0.42
CRIM1-204ENST00000428774 ANO3Q9BYT9 981 aa12.4□□□□□ -0.42
CRIM1-204ENST00000428774 PSTPIP2Q9H939 334 aa12.4□□□□□ -0.42
CRIM1-204ENST00000428774 CFAP45Q9UL16 551 aa12.4□□□□□ -0.42
CRIM1-204ENST00000428774 MRPL11Q9Y3B7 192 aaKnown RBP12.4□□□□□ -0.42
CRIM1-204ENST00000428774 NFIBO00712 420 aa12.39□□□□□ -0.43
CRIM1-204ENST00000428774 ATP2A1O14983 1001 aa12.39□□□□□ -0.43
CRIM1-204ENST00000428774 PEX10O60683 326 aa12.39□□□□□ -0.43
CRIM1-204ENST00000428774 GADD45BO75293 160 aaPredicted RBP12.39□□□□□ -0.43
CRIM1-204ENST00000428774 CNMDO75829 334 aa12.39□□□□□ -0.43
CRIM1-204ENST00000428774 CETPP11597 493 aa12.39□□□□□ -0.43
CRIM1-204ENST00000428774 ALAS1P13196 640 aa12.39□□□□□ -0.43
CRIM1-204ENST00000428774 ATP2B1P20020 1258 aa12.39□□□□□ -0.43
CRIM1-204ENST00000428774 GTF2A2P52657 109 aa12.39□□□□□ -0.43
CRIM1-204ENST00000428774 MRPL12P52815 198 aaKnown RBP12.39□□□□□ -0.43
CRIM1-204ENST00000428774 OAZ1P54368 228 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms