RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 NYAP2Q9P242 653 aa9.8□□□□□ -0.84
ITSN1-216ENST00000428240 CLIP2Q9UDT6 1046 aa9.8□□□□□ -0.84
ITSN1-216ENST00000428240 FBXO40Q9UH90 709 aa9.8□□□□□ -0.84
ITSN1-216ENST00000428240 CTDP1Q9Y5B0 961 aaPredicted RBP9.8□□□□□ -0.84
ITSN1-216ENST00000428240 SLC4A4Q9Y6R1 1079 aa9.8□□□□□ -0.84
ITSN1-216ENST00000428240 MYH8P13535 1937 aa9.8□□□□□ -0.84
ITSN1-216ENST00000428240 LRRC37A2A6NM11 1700 aa9.79□□□□□ -0.84
ITSN1-216ENST00000428240 TAPT1Q6NXT6 567 aa9.79□□□□□ -0.84
ITSN1-216ENST00000428240 HLA-CQ95604 372 aa9.79□□□□□ -0.84
ITSN1-216ENST00000428240 PUS7LQ9H0K6 701 aaKnown RBP9.79□□□□□ -0.84
ITSN1-216ENST00000428240 AP5M1Q9H0R1 490 aa9.79□□□□□ -0.84
ITSN1-216ENST00000428240 A1CFQ9NQ94 594 aaKnown RBP9.79□□□□□ -0.84
ITSN1-216ENST00000428240 BAZ2AQ9UIF9 1905 aaKnown RBP9.79□□□□□ -0.84
ITSN1-216ENST00000428240 NCOR1O75376 2440 aa9.78□□□□□ -0.84
ITSN1-216ENST00000428240 GREB1LQ9C091 1923 aaPredicted RBP9.78□□□□□ -0.84
ITSN1-216ENST00000428240 IGKV6D-41A0A0C4DH26 115 aa9.78□□□□□ -0.84
ITSN1-216ENST00000428240 PI4K2BG5E9Z4 385 aa9.78□□□□□ -0.84
ITSN1-216ENST00000428240 ZEB2O60315 1214 aa9.78□□□□□ -0.84
ITSN1-216ENST00000428240 LPXNO60711 386 aa9.78□□□□□ -0.84
ITSN1-216ENST00000428240 PFKMP08237 780 aa9.78□□□□□ -0.84
ITSN1-216ENST00000428240 IFIT2P09913 472 aaKnown RBP9.78□□□□□ -0.84
ITSN1-216ENST00000428240 OAZ1P54368 228 aa9.78□□□□□ -0.84
ITSN1-216ENST00000428240 GRB10Q13322 594 aa9.78□□□□□ -0.84
ITSN1-216ENST00000428240 EEPD1Q7L9B9 569 aa9.78□□□□□ -0.84
ITSN1-216ENST00000428240 FBXO16Q8IX29 292 aaPredicted RBP9.78□□□□□ -0.84
ITSN1-216ENST00000428240 FTSJ3Q8IY81 847 aaKnown RBP9.78□□□□□ -0.84
ITSN1-216ENST00000428240 LRRC47Q8N1G4 583 aaKnown RBP9.78□□□□□ -0.84
ITSN1-216ENST00000428240 CLASRPQ8N2M8 674 aaKnown RBP9.78□□□□□ -0.84
ITSN1-216ENST00000428240 PPP1R13LQ8WUF5 828 aa9.78□□□□□ -0.84
ITSN1-216ENST00000428240 DDRGK1Q96HY6 314 aa9.78□□□□□ -0.84
ITSN1-216ENST00000428240 SEZ6LQ9BYH1 1024 aa9.78□□□□□ -0.84
ITSN1-216ENST00000428240 ACAD9Q9H845 621 aa9.78□□□□□ -0.84
ITSN1-216ENST00000428240 ARPP21Q9UBL0 812 aaPredicted RBP9.78□□□□□ -0.84
ITSN1-216ENST00000428240 FEM1BQ9UK73 627 aa9.78□□□□□ -0.84
ITSN1-216ENST00000428240 ZNF536O15090 1300 aa9.78□□□□□ -0.84
ITSN1-216ENST00000428240 MCM3APO60318 1980 aa9.77□□□□□ -0.84
ITSN1-216ENST00000428240 MYO9BQ13459 2157 aa9.77□□□□□ -0.85
ITSN1-216ENST00000428240 PRRC2BQ5JSZ5 2229 aaKnown RBP9.77□□□□□ -0.85
ITSN1-216ENST00000428240 ASB14A6NK59 587 aa9.77□□□□□ -0.85
ITSN1-216ENST00000428240 PRDM1O75626 825 aa9.77□□□□□ -0.85
ITSN1-216ENST00000428240 UBE3CQ15386 1083 aa9.77□□□□□ -0.85
ITSN1-216ENST00000428240 HSP90AB4PQ58FF6 505 aa9.77□□□□□ -0.85
ITSN1-216ENST00000428240 IQSEC1Q6DN90 963 aa9.77□□□□□ -0.85
ITSN1-216ENST00000428240 HERC6Q8IVU3 1022 aa9.77□□□□□ -0.85
ITSN1-216ENST00000428240 MKL1Q969V6 931 aa9.77□□□□□ -0.85
ITSN1-216ENST00000428240 CEP95Q96GE4 821 aa9.77□□□□□ -0.85
ITSN1-216ENST00000428240 PURBQ96QR8 312 aaKnown RBP9.77□□□□□ -0.85
ITSN1-216ENST00000428240 SLC9A7Q96T83 725 aa9.77□□□□□ -0.85
ITSN1-216ENST00000428240 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.77□□□□□ -0.85
ITSN1-216ENST00000428240 MKNK2Q9HBH9 465 aa9.77□□□□□ -0.85
ITSN1-216ENST00000428240 RNF146Q9NTX7 359 aa9.77□□□□□ -0.85
ITSN1-216ENST00000428240 COG6Q9Y2V7 657 aa9.77□□□□□ -0.85
ITSN1-216ENST00000428240 TNKSO95271 1327 aa9.77□□□□□ -0.85
ITSN1-216ENST00000428240 LCHNA4D1U4 455 aa9.76□□□□□ -0.85
ITSN1-216ENST00000428240 MINDY4BA8MYZ0 360 aa9.76□□□□□ -0.85
ITSN1-216ENST00000428240 TMEM232C9JQI7 657 aa9.76□□□□□ -0.85
ITSN1-216ENST00000428240 RBAK-RBAKDNI3L0D1 243 aa9.76□□□□□ -0.85
ITSN1-216ENST00000428240 IQCF3P0C7M6 154 aa9.76□□□□□ -0.85
ITSN1-216ENST00000428240 SUPT20HL2P0C7V6 817 aa9.76□□□□□ -0.85
ITSN1-216ENST00000428240 BMP3P12645 472 aa9.76□□□□□ -0.85
ITSN1-216ENST00000428240 ACTN1P12814 892 aa9.76□□□□□ -0.85
ITSN1-216ENST00000428240 ATP5JP18859 108 aa9.76□□□□□ -0.85
ITSN1-216ENST00000428240 SNAP25P60880 206 aa9.76□□□□□ -0.85
ITSN1-216ENST00000428240 PURAQ00577 322 aaKnown RBP9.76□□□□□ -0.85
ITSN1-216ENST00000428240 SBK1Q52WX2 424 aa9.76□□□□□ -0.85
ITSN1-216ENST00000428240 MUM1L1Q5H9M0 696 aa9.76□□□□□ -0.85
ITSN1-216ENST00000428240 KIAA1211Q6ZU35 1233 aa9.76□□□□□ -0.85
ITSN1-216ENST00000428240 TMCO2Q7Z6W1 182 aaPredicted RBP9.76□□□□□ -0.85
ITSN1-216ENST00000428240 GMCL1P1Q8NEA9 526 aa9.76□□□□□ -0.85
ITSN1-216ENST00000428240 PHOSPHO2Q8TCD6 241 aa9.76□□□□□ -0.85
ITSN1-216ENST00000428240 CHMP4CQ96CF2 233 aa9.76□□□□□ -0.85
ITSN1-216ENST00000428240 KIF1BPQ96EK5 621 aa9.76□□□□□ -0.85
ITSN1-216ENST00000428240 TRERF1Q96PN7 1200 aa9.76□□□□□ -0.85
ITSN1-216ENST00000428240 STRBPQ96SI9 672 aaKnown RBP9.76□□□□□ -0.85
ITSN1-216ENST00000428240 HAUS7Q99871 368 aa9.76□□□□□ -0.85
ITSN1-216ENST00000428240 MTMR4Q9NYA4 1195 aa9.76□□□□□ -0.85
ITSN1-216ENST00000428240 Q9Y3F1 56 aa9.76□□□□□ -0.85
ITSN1-216ENST00000428240 GSG1L2A8MUP6 293 aa9.75□□□□□ -0.85
ITSN1-216ENST00000428240 PRR33A8MZF0 331 aa9.75□□□□□ -0.85
ITSN1-216ENST00000428240 ALAS1P13196 640 aa9.75□□□□□ -0.85
ITSN1-216ENST00000428240 DUSP28Q4G0W2 176 aa9.75□□□□□ -0.85
ITSN1-216ENST00000428240 SLFN13Q68D06 897 aa9.75□□□□□ -0.85
ITSN1-216ENST00000428240 RPAP2Q8IXW5 612 aaPredicted RBP9.75□□□□□ -0.85
ITSN1-216ENST00000428240 GDPD5Q8WTR4 605 aa9.75□□□□□ -0.85
ITSN1-216ENST00000428240 FTOQ9C0B1 505 aaKnown RBP eCLIP9.75□□□□□ -0.85
ITSN1-216ENST00000428240 EPB41L4AQ9HCS5 686 aaPredicted RBP9.75□□□□□ -0.85
ITSN1-216ENST00000428240 CYP39A1Q9NYL5 469 aa9.75□□□□□ -0.85
ITSN1-216ENST00000428240 COL4A4P53420 1690 aaPredicted RBP9.74□□□□□ -0.85
ITSN1-216ENST00000428240 WDFY4Q6ZS81 3184 aa9.74□□□□□ -0.85
ITSN1-216ENST00000428240 SCN5AQ14524 2016 aa9.74□□□□□ -0.85
ITSN1-216ENST00000428240 KIF28PB7ZC32 967 aa9.74□□□□□ -0.85
ITSN1-216ENST00000428240 TTLL1O95922 423 aa9.74□□□□□ -0.85
ITSN1-216ENST00000428240 MYL3P08590 195 aa9.74□□□□□ -0.85
ITSN1-216ENST00000428240 RFC2P35250 354 aa9.74□□□□□ -0.85
ITSN1-216ENST00000428240 MRE11P49959 708 aa9.74□□□□□ -0.85
ITSN1-216ENST00000428240 STAT2P52630 851 aa9.74□□□□□ -0.85
ITSN1-216ENST00000428240 NBPF20Q3BBV1 942 aa9.74□□□□□ -0.85
ITSN1-216ENST00000428240 FAM47CQ5HY64 1035 aa9.74□□□□□ -0.85
ITSN1-216ENST00000428240 SIRT2Q8IXJ6 389 aa9.74□□□□□ -0.85
ITSN1-216ENST00000428240 FAM178BQ8IXR5 827 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms