RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 ALAS1P13196 640 aa20.56■□□□□ 0.88
DDR1-235ENST00000428153 TNFAIP2Q03169 654 aa20.56■□□□□ 0.88
DDR1-235ENST00000428153 MORC4Q8TE76 937 aa20.56■□□□□ 0.88
DDR1-235ENST00000428153 RANBP17Q9H2T7 1088 aaKnown RBP20.56■□□□□ 0.88
DDR1-235ENST00000428153 CYP39A1Q9NYL5 469 aa20.56■□□□□ 0.88
DDR1-235ENST00000428153 GNEQ9Y223 722 aaKnown RBP20.56■□□□□ 0.88
DDR1-235ENST00000428153 PRUNE2Q8WUY3 3088 aa20.56■□□□□ 0.88
DDR1-235ENST00000428153 NMT2O60551 498 aa20.55■□□□□ 0.88
DDR1-235ENST00000428153 TOP1P11387 765 aaKnown RBP20.55■□□□□ 0.88
DDR1-235ENST00000428153 EPHB4P54760 987 aa20.55■□□□□ 0.88
DDR1-235ENST00000428153 PPIGQ13427 754 aaKnown RBP eCLIP20.55■□□□□ 0.882e-6■■■□□ 16.6
DDR1-235ENST00000428153 FAM161BQ96MY7 647 aa20.55■□□□□ 0.88
DDR1-235ENST00000428153 CDX2Q99626 313 aaPredicted RBP20.55■□□□□ 0.88
DDR1-235ENST00000428153 VCANP13611 3396 aa20.55■□□□□ 0.88
DDR1-235ENST00000428153 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.54■□□□□ 0.88
DDR1-235ENST00000428153 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.54■□□□□ 0.88
DDR1-235ENST00000428153 TLR3O15455 904 aaKnown RBP20.54■□□□□ 0.88
DDR1-235ENST00000428153 IQSEC1Q6DN90 963 aa20.54■□□□□ 0.88
DDR1-235ENST00000428153 FAM126BQ8IXS8 530 aa20.54■□□□□ 0.88
DDR1-235ENST00000428153 SLC43A3Q8NBI5 491 aa20.54■□□□□ 0.88
DDR1-235ENST00000428153 VTI1AQ96AJ9 217 aa20.54■□□□□ 0.88
DDR1-235ENST00000428153 TTC14Q96N46 770 aa20.54■□□□□ 0.88
DDR1-235ENST00000428153 CRBNQ96SW2 442 aa20.54■□□□□ 0.88
DDR1-235ENST00000428153 VTA1Q9NP79 307 aa20.54■□□□□ 0.88
DDR1-235ENST00000428153 INCENPQ9NQS7 918 aa20.54■□□□□ 0.88
DDR1-235ENST00000428153 CCPG1Q9ULG6 757 aa20.54■□□□□ 0.88
DDR1-235ENST00000428153 LRRC37A2A6NM11 1700 aa20.53■□□□□ 0.88
DDR1-235ENST00000428153 ZEB2O60315 1214 aa20.53■□□□□ 0.88
DDR1-235ENST00000428153 HSPD1P10809 573 aaKnown RBP20.53■□□□□ 0.88
DDR1-235ENST00000428153 MFAP1P55081 439 aaKnown RBP20.53■□□□□ 0.88
DDR1-235ENST00000428153 TLK2Q86UE8 772 aa20.53■□□□□ 0.88
DDR1-235ENST00000428153 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.53■□□□□ 0.88
DDR1-235ENST00000428153 TTYH1Q9H313 450 aaPredicted RBP20.53■□□□□ 0.88
DDR1-235ENST00000428153 ADD3Q9UEY8 706 aaKnown RBP20.53■□□□□ 0.88
DDR1-235ENST00000428153 ASTN1O14525 1302 aa20.53■□□□□ 0.88
DDR1-235ENST00000428153 A0A0D9SFI3 127 aa20.52■□□□□ 0.88
DDR1-235ENST00000428153 CD4P01730 458 aa20.52■□□□□ 0.88
DDR1-235ENST00000428153 IRX5P78411 483 aaPredicted RBP20.52■□□□□ 0.88
DDR1-235ENST00000428153 CCDC96Q2M329 555 aa20.52■□□□□ 0.88
DDR1-235ENST00000428153 MUM1L1Q5H9M0 696 aa20.52■□□□□ 0.88
DDR1-235ENST00000428153 SYDE2Q5VT97 1194 aa20.52■□□□□ 0.88
DDR1-235ENST00000428153 TMEM199Q8N511 208 aa20.52■□□□□ 0.88
DDR1-235ENST00000428153 FAM227BQ96M60 508 aa20.52■□□□□ 0.88
DDR1-235ENST00000428153 AP5M1Q9H0R1 490 aa20.52■□□□□ 0.88
DDR1-235ENST00000428153 CCDC171Q6TFL3 1326 aa20.52■□□□□ 0.87
DDR1-235ENST00000428153 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.51■□□□□ 0.87
DDR1-235ENST00000428153 FSCN1Q16658 493 aaKnown RBP20.51■□□□□ 0.87
DDR1-235ENST00000428153 TAPT1Q6NXT6 567 aa20.51■□□□□ 0.87
DDR1-235ENST00000428153 NOL8Q76FK4 1167 aaKnown RBP20.51■□□□□ 0.87
DDR1-235ENST00000428153 TMEM47Q9BQJ4 181 aa20.51■□□□□ 0.87
DDR1-235ENST00000428153 RNF41Q9H4P4 317 aaPredicted RBP20.51■□□□□ 0.87
DDR1-235ENST00000428153 TOMM22Q9NS69 142 aa20.51■□□□□ 0.87
DDR1-235ENST00000428153 SNHG28P0DPA3 235 aa20.5■□□□□ 0.87
DDR1-235ENST00000428153 PDHBP11177 359 aa20.5■□□□□ 0.87
DDR1-235ENST00000428153 SMPD1P17405 629 aa20.5■□□□□ 0.87
DDR1-235ENST00000428153 RASIP1Q5U651 963 aa20.5■□□□□ 0.87
DDR1-235ENST00000428153 PSRC1Q6PGN9 363 aaPredicted RBP20.5■□□□□ 0.87
DDR1-235ENST00000428153 NSMFQ6X4W1 530 aa20.5■□□□□ 0.87
DDR1-235ENST00000428153 SMC5Q8IY18 1101 aa20.5■□□□□ 0.87
DDR1-235ENST00000428153 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.5■□□□□ 0.879e-7■■□□□ 13.5
DDR1-235ENST00000428153 MAF1Q9H063 256 aa20.5■□□□□ 0.87
DDR1-235ENST00000428153 WDR19Q8NEZ3 1342 aa20.5■□□□□ 0.87
DDR1-235ENST00000428153 DNAJB2P25686 324 aa20.49■□□□□ 0.87
DDR1-235ENST00000428153 BEX3Q00994 111 aa20.49■□□□□ 0.87
DDR1-235ENST00000428153 RRP12Q5JTH9 1297 aaKnown RBP20.49■□□□□ 0.87
DDR1-235ENST00000428153 TMEM240Q5SV17 173 aa20.49■□□□□ 0.87
DDR1-235ENST00000428153 AKNAD1Q5T1N1 836 aa20.49■□□□□ 0.87
DDR1-235ENST00000428153 CXCL17Q6UXB2 119 aa20.49■□□□□ 0.87
DDR1-235ENST00000428153 MFSD6Q6ZSS7 791 aa20.49■□□□□ 0.87
DDR1-235ENST00000428153 RASGRP2Q7LDG7 609 aa20.49■□□□□ 0.87
DDR1-235ENST00000428153 ZNF589Q86UQ0 364 aaPredicted RBP20.49■□□□□ 0.87
DDR1-235ENST00000428153 MAFAQ8NHW3 353 aaPredicted RBP20.49■□□□□ 0.87
DDR1-235ENST00000428153 OSBPL3Q9H4L5 887 aa20.49■□□□□ 0.87
DDR1-235ENST00000428153 LCTP09848 1927 aa20.49■□□□□ 0.87
DDR1-235ENST00000428153 DYNC1LI2O43237 492 aaPredicted RBP20.48■□□□□ 0.87
DDR1-235ENST00000428153 ALDH5A1P51649 535 aaPredicted RBP20.48■□□□□ 0.87
DDR1-235ENST00000428153 SNAP25P60880 206 aa20.48■□□□□ 0.87
DDR1-235ENST00000428153 ZNF543Q08ER8 600 aa20.48■□□□□ 0.87
DDR1-235ENST00000428153 NMIQ13287 307 aaPredicted RBP20.48■□□□□ 0.87
DDR1-235ENST00000428153 ITGA7Q13683 1181 aa20.48■□□□□ 0.87
DDR1-235ENST00000428153 DUSP28Q4G0W2 176 aa20.48■□□□□ 0.87
DDR1-235ENST00000428153 TTBK2Q6IQ55 1244 aa20.48■□□□□ 0.87
DDR1-235ENST00000428153 FBXO16Q8IX29 292 aaPredicted RBP20.48■□□□□ 0.87
DDR1-235ENST00000428153 CHMP4CQ96CF2 233 aa20.48■□□□□ 0.87
DDR1-235ENST00000428153 MTMR7Q9Y216 660 aa20.48■□□□□ 0.87
DDR1-235ENST00000428153 CHD9Q3L8U1 2897 aa20.47■□□□□ 0.87
DDR1-235ENST00000428153 RBM47A0AV96 593 aaKnown RBP20.47■□□□□ 0.87
DDR1-235ENST00000428153 TRIM6-TRIM34B2RNG4 842 aa20.47■□□□□ 0.87
DDR1-235ENST00000428153 CSF2RAP15509 400 aa20.47■□□□□ 0.87
DDR1-235ENST00000428153 SLC16A2P36021 539 aa20.47■□□□□ 0.87
DDR1-235ENST00000428153 BAATQ14032 418 aaPredicted RBP20.47■□□□□ 0.87
DDR1-235ENST00000428153 CCDC178Q5BJE1 867 aa20.47■□□□□ 0.87
DDR1-235ENST00000428153 GPATCH4Q5T3I0 446 aaKnown RBP20.47■□□□□ 0.87
DDR1-235ENST00000428153 KIAA1211Q6ZU35 1233 aa20.47■□□□□ 0.87
DDR1-235ENST00000428153 C16orf59Q7L2K0 433 aa20.47■□□□□ 0.87
DDR1-235ENST00000428153 MYLIPQ8WY64 445 aa20.47■□□□□ 0.87
DDR1-235ENST00000428153 ESR2Q92731 530 aa20.47■□□□□ 0.87
DDR1-235ENST00000428153 MPHOSPH6Q99547 160 aaKnown RBP20.47■□□□□ 0.87
DDR1-235ENST00000428153 LNPKQ9C0E8 428 aa20.47■□□□□ 0.87
DDR1-235ENST00000428153 RWDD1Q9H446 243 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms