RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 FBXO40Q9UH90 709 aa12.36□□□□□ -0.43
RDH11-202ENST00000428130 SCN10AQ9Y5Y9 1956 aa12.36□□□□□ -0.43
RDH11-202ENST00000428130 SIP14410 1827 aa12.35□□□□□ -0.43
RDH11-202ENST00000428130 ABCB7O75027 752 aa12.35□□□□□ -0.43
RDH11-202ENST00000428130 OAZ1P54368 228 aa12.35□□□□□ -0.43
RDH11-202ENST00000428130 CNTN2Q02246 1040 aa12.35□□□□□ -0.43
RDH11-202ENST00000428130 CTR9Q6PD62 1173 aa12.35□□□□□ -0.43
RDH11-202ENST00000428130 FAM133AQ8N9E0 248 aa12.35□□□□□ -0.43
RDH11-202ENST00000428130 RHPN1Q8TCX5 695 aa12.35□□□□□ -0.43
RDH11-202ENST00000428130 KIFC2Q96AC6 838 aa12.35□□□□□ -0.43
RDH11-202ENST00000428130 SOWAHBA6NEL2 793 aa12.34□□□□□ -0.43
RDH11-202ENST00000428130 FAM86C2PA6NEL3 165 aa12.34□□□□□ -0.43
RDH11-202ENST00000428130 ARHGEF15O94989 841 aa12.34□□□□□ -0.43
RDH11-202ENST00000428130 CHGBP05060 677 aa12.34□□□□□ -0.43
RDH11-202ENST00000428130 PFKMP08237 780 aa12.34□□□□□ -0.43
RDH11-202ENST00000428130 SMPD1P17405 629 aa12.34□□□□□ -0.43
RDH11-202ENST00000428130 RASA1P20936 1047 aa12.34□□□□□ -0.43
RDH11-202ENST00000428130 PSMC6P62333 389 aa12.34□□□□□ -0.43
RDH11-202ENST00000428130 NOL8Q76FK4 1167 aaKnown RBP12.34□□□□□ -0.43
RDH11-202ENST00000428130 HLA-CQ95604 372 aa12.34□□□□□ -0.43
RDH11-202ENST00000428130 DDRGK1Q96HY6 314 aa12.34□□□□□ -0.43
RDH11-202ENST00000428130 ALDH8A1Q9H2A2 487 aaPredicted RBP12.34□□□□□ -0.43
RDH11-202ENST00000428130 PAG1Q9NWQ8 432 aa12.34□□□□□ -0.43
RDH11-202ENST00000428130 CTDP1Q9Y5B0 961 aaPredicted RBP12.34□□□□□ -0.43
RDH11-202ENST00000428130 SLC4A4Q9Y6R1 1079 aa12.34□□□□□ -0.43
RDH11-202ENST00000428130 TRIOO75962 3097 aa12.34□□□□□ -0.43
RDH11-202ENST00000428130 DYNC1LI2O43237 492 aaPredicted RBP12.33□□□□□ -0.44
RDH11-202ENST00000428130 ZEB2O60315 1214 aa12.33□□□□□ -0.44
RDH11-202ENST00000428130 RLBP1P12271 317 aa12.33□□□□□ -0.44
RDH11-202ENST00000428130 TAP1Q03518 808 aa12.33□□□□□ -0.44
RDH11-202ENST00000428130 TMEM63BQ5T3F8 832 aa12.33□□□□□ -0.44
RDH11-202ENST00000428130 POTEHQ6S545 545 aa12.33□□□□□ -0.44
RDH11-202ENST00000428130 ITPRIPQ8IWB1 547 aa12.33□□□□□ -0.44
RDH11-202ENST00000428130 ARNTL2Q8WYA1 636 aa12.33□□□□□ -0.44
RDH11-202ENST00000428130 SLC9A7Q96T83 725 aa12.33□□□□□ -0.44
RDH11-202ENST00000428130 AP5M1Q9H0R1 490 aa12.33□□□□□ -0.44
RDH11-202ENST00000428130 CD320Q9NPF0 282 aa12.33□□□□□ -0.44
RDH11-202ENST00000428130 A1CFQ9NQ94 594 aaKnown RBP12.33□□□□□ -0.44
RDH11-202ENST00000428130 HOMER2Q9NSB8 354 aa12.33□□□□□ -0.44
RDH11-202ENST00000428130 ARPP21Q9UBL0 812 aaPredicted RBP12.33□□□□□ -0.44
RDH11-202ENST00000428130 FEM1BQ9UK73 627 aa12.33□□□□□ -0.44
RDH11-202ENST00000428130 DDX49Q9Y6V7 483 aaKnown RBP12.33□□□□□ -0.44
RDH11-202ENST00000428130 IGKV6D-41A0A0C4DH26 115 aa12.32□□□□□ -0.44
RDH11-202ENST00000428130 ASB14A6NK59 587 aa12.32□□□□□ -0.44
RDH11-202ENST00000428130 PI4K2BG5E9Z4 385 aa12.32□□□□□ -0.44
RDH11-202ENST00000428130 LPXNO60711 386 aa12.32□□□□□ -0.44
RDH11-202ENST00000428130 CYP2C9P11712 490 aa12.32□□□□□ -0.44
RDH11-202ENST00000428130 UBE3CQ15386 1083 aa12.32□□□□□ -0.44
RDH11-202ENST00000428130 HSP90AB4PQ58FF6 505 aa12.32□□□□□ -0.44
RDH11-202ENST00000428130 TAPT1Q6NXT6 567 aa12.32□□□□□ -0.44
RDH11-202ENST00000428130 DEFB128Q7Z7B8 93 aa12.32□□□□□ -0.44
RDH11-202ENST00000428130 ALYREFQ86V81 257 aaKnown RBP12.32□□□□□ -0.44
RDH11-202ENST00000428130 FTSJ3Q8IY81 847 aaKnown RBP12.32□□□□□ -0.44
RDH11-202ENST00000428130 CLASRPQ8N2M8 674 aaKnown RBP12.32□□□□□ -0.44
RDH11-202ENST00000428130 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.32□□□□□ -0.44
RDH11-202ENST00000428130 ACAD9Q9H845 621 aa12.32□□□□□ -0.44
RDH11-202ENST00000428130 PDGFCQ9NRA1 345 aa12.32□□□□□ -0.44
RDH11-202ENST00000428130 TRMT13Q9NUP7 481 aaKnown RBP12.32□□□□□ -0.44
RDH11-202ENST00000428130 CLIP2Q9UDT6 1046 aa12.32□□□□□ -0.44
RDH11-202ENST00000428130 Q9Y3F1 56 aa12.32□□□□□ -0.44
RDH11-202ENST00000428130 C5orf42Q9H799 3197 aa12.31□□□□□ -0.44
RDH11-202ENST00000428130 ACTN1P12814 892 aa12.31□□□□□ -0.44
RDH11-202ENST00000428130 GRB10Q13322 594 aa12.31□□□□□ -0.44
RDH11-202ENST00000428130 SBK1Q52WX2 424 aa12.31□□□□□ -0.44
RDH11-202ENST00000428130 IQSEC1Q6DN90 963 aa12.31□□□□□ -0.44
RDH11-202ENST00000428130 SPRED2Q7Z698 418 aa12.31□□□□□ -0.44
RDH11-202ENST00000428130 FBXO16Q8IX29 292 aaPredicted RBP12.31□□□□□ -0.44
RDH11-202ENST00000428130 PHOSPHO2Q8TCD6 241 aa12.31□□□□□ -0.44
RDH11-202ENST00000428130 MKL1Q969V6 931 aa12.31□□□□□ -0.44
RDH11-202ENST00000428130 PUS7LQ9H0K6 701 aaKnown RBP12.31□□□□□ -0.44
RDH11-202ENST00000428130 BOLA2Q9H3K6 86 aa12.31□□□□□ -0.44
RDH11-202ENST00000428130 RNF146Q9NTX7 359 aa12.31□□□□□ -0.44
RDH11-202ENST00000428130 COG6Q9Y2V7 657 aa12.31□□□□□ -0.44
RDH11-202ENST00000428130 ZNF536O15090 1300 aa12.31□□□□□ -0.44
RDH11-202ENST00000428130 TNKSO95271 1327 aa12.31□□□□□ -0.44
RDH11-202ENST00000428130 IFIT2P09913 472 aaKnown RBP12.3□□□□□ -0.44
RDH11-202ENST00000428130 SUPT20HL2P0C7V6 817 aa12.3□□□□□ -0.44
RDH11-202ENST00000428130 FDX1P10109 184 aa12.3□□□□□ -0.44
RDH11-202ENST00000428130 RFC2P35250 354 aa12.3□□□□□ -0.44
RDH11-202ENST00000428130 EEPD1Q7L9B9 569 aa12.3□□□□□ -0.44
RDH11-202ENST00000428130 HERC6Q8IVU3 1022 aa12.3□□□□□ -0.44
RDH11-202ENST00000428130 STK11IPQ8N1F8 1099 aa12.3□□□□□ -0.44
RDH11-202ENST00000428130 GMCL1P1Q8NEA9 526 aa12.3□□□□□ -0.44
RDH11-202ENST00000428130 KIF1BPQ96EK5 621 aa12.3□□□□□ -0.44
RDH11-202ENST00000428130 MKNK2Q9HBH9 465 aa12.3□□□□□ -0.44
RDH11-202ENST00000428130 USP34Q70CQ2 3546 aa12.29□□□□□ -0.44
RDH11-202ENST00000428130 PRR33A8MZF0 331 aa12.29□□□□□ -0.44
RDH11-202ENST00000428130 BMP3P12645 472 aa12.29□□□□□ -0.44
RDH11-202ENST00000428130 ATP5JP18859 108 aa12.29□□□□□ -0.44
RDH11-202ENST00000428130 PURAQ00577 322 aaKnown RBP12.29□□□□□ -0.44
RDH11-202ENST00000428130 RPAP2Q8IXW5 612 aaPredicted RBP12.29□□□□□ -0.44
RDH11-202ENST00000428130 LRRC47Q8N1G4 583 aaKnown RBP12.29□□□□□ -0.44
RDH11-202ENST00000428130 CEP95Q96GE4 821 aa12.29□□□□□ -0.44
RDH11-202ENST00000428130 HAUS7Q99871 368 aa12.29□□□□□ -0.44
RDH11-202ENST00000428130 VTA1Q9NP79 307 aa12.29□□□□□ -0.44
RDH11-202ENST00000428130 POLR3EQ9NVU0 708 aa12.29□□□□□ -0.44
RDH11-202ENST00000428130 MTMR4Q9NYA4 1195 aa12.29□□□□□ -0.44
RDH11-202ENST00000428130 SYNPO2Q9UMS6 1093 aa12.29□□□□□ -0.44
RDH11-202ENST00000428130 GSG1L2A8MUP6 293 aa12.28□□□□□ -0.44
RDH11-202ENST00000428130 KIF28PB7ZC32 967 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms