RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 GPNMBQ14956 572 aa14.41□□□□□ -0.1
DDX39B-208ENST00000428098 ANKRD35Q8N283 1001 aa14.41□□□□□ -0.1
DDX39B-208ENST00000428098 SLF1Q9BQI6 1058 aa14.41□□□□□ -0.1
DDX39B-208ENST00000428098 RAVER2Q9HCJ3 691 aaKnown RBP14.41□□□□□ -0.1
DDX39B-208ENST00000428098 ALG13Q9NP73 1137 aaKnown RBP14.41□□□□□ -0.1
DDX39B-208ENST00000428098 CYP2D7A0A087X1C5 515 aa14.4□□□□□ -0.1
DDX39B-208ENST00000428098 RAD21O60216 631 aa14.4□□□□□ -0.1
DDX39B-208ENST00000428098 GNAI3P08754 354 aa14.4□□□□□ -0.1
DDX39B-208ENST00000428098 SUPT20HL2P0C7V6 817 aa14.4□□□□□ -0.1
DDX39B-208ENST00000428098 RFC2P35250 354 aa14.4□□□□□ -0.1
DDX39B-208ENST00000428098 TAPT1Q6NXT6 567 aa14.4□□□□□ -0.1
DDX39B-208ENST00000428098 FAM133AQ8N9E0 248 aa14.4□□□□□ -0.1
DDX39B-208ENST00000428098 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.4□□□□□ -0.1
DDX39B-208ENST00000428098 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.4□□□□□ -0.1
DDX39B-208ENST00000428098 CCDC8Q9H0W5 538 aaPredicted RBP14.4□□□□□ -0.1
DDX39B-208ENST00000428098 SWAP70Q9UH65 585 aa14.4□□□□□ -0.1
DDX39B-208ENST00000428098 RIF1Q5UIP0 2472 aaKnown RBP14.39□□□□□ -0.11
DDX39B-208ENST00000428098 ZEB2O60315 1214 aa14.39□□□□□ -0.11
DDX39B-208ENST00000428098 GFRA3O60609 400 aa14.39□□□□□ -0.11
DDX39B-208ENST00000428098 CDK8P49336 464 aa14.39□□□□□ -0.11
DDX39B-208ENST00000428098 WDR5P61964 334 aaKnown RBP14.39□□□□□ -0.11
DDX39B-208ENST00000428098 DEFB103AP81534 67 aa14.39□□□□□ -0.11
DDX39B-208ENST00000428098 TCTN1Q2MV58 587 aa14.39□□□□□ -0.11
DDX39B-208ENST00000428098 PUS10Q3MIT2 529 aaKnown RBP14.39□□□□□ -0.11
DDX39B-208ENST00000428098 CCDC17Q96LX7 622 aa14.39□□□□□ -0.11
DDX39B-208ENST00000428098 CRNKL1Q9BZJ0 848 aaKnown RBP14.39□□□□□ -0.11
DDX39B-208ENST00000428098 API5Q9BZZ5 524 aaKnown RBP14.39□□□□□ -0.11
DDX39B-208ENST00000428098 KANSL2Q9H9L4 492 aa14.39□□□□□ -0.11
DDX39B-208ENST00000428098 FAM86C1Q9NVL1 165 aa14.39□□□□□ -0.11
DDX39B-208ENST00000428098 MUTYHQ9UIF7 546 aa14.39□□□□□ -0.11
DDX39B-208ENST00000428098 LINC01553A4QN01 128 aa14.38□□□□□ -0.11
DDX39B-208ENST00000428098 PRKAB2O43741 272 aa14.38□□□□□ -0.11
DDX39B-208ENST00000428098 PTPN5P54829 565 aa14.38□□□□□ -0.11
DDX39B-208ENST00000428098 IQSEC1Q6DN90 963 aa14.38□□□□□ -0.11
DDX39B-208ENST00000428098 ADHFE1Q8IWW8 467 aa14.38□□□□□ -0.11
DDX39B-208ENST00000428098 LCORLQ8N3X6 602 aa14.38□□□□□ -0.11
DDX39B-208ENST00000428098 PRPF38AQ8NAV1 312 aaKnown RBP14.38□□□□□ -0.11
DDX39B-208ENST00000428098 EAF2Q96CJ1 260 aaPredicted RBP14.38□□□□□ -0.11
DDX39B-208ENST00000428098 TGS1Q96RS0 853 aaKnown RBP14.38□□□□□ -0.11
DDX39B-208ENST00000428098 ZBED2Q9BTP6 218 aa14.38□□□□□ -0.11
DDX39B-208ENST00000428098 GOPCQ9HD26 462 aa14.38□□□□□ -0.11
DDX39B-208ENST00000428098 Q9Y3F1 56 aa14.38□□□□□ -0.11
DDX39B-208ENST00000428098 SLFN5Q08AF3 891 aa14.37□□□□□ -0.11
DDX39B-208ENST00000428098 NBPF20Q3BBV1 942 aa14.37□□□□□ -0.11
DDX39B-208ENST00000428098 EEPD1Q7L9B9 569 aa14.37□□□□□ -0.11
DDX39B-208ENST00000428098 BMP8AQ7Z5Y6 402 aa14.37□□□□□ -0.11
DDX39B-208ENST00000428098 RETREG2Q8NC44 543 aa14.37□□□□□ -0.11
DDX39B-208ENST00000428098 CHST13Q8NET6 341 aa14.37□□□□□ -0.11
DDX39B-208ENST00000428098 RAD9AQ99638 391 aa14.37□□□□□ -0.11
DDX39B-208ENST00000428098 C17orf80Q9BSJ5 609 aa14.37□□□□□ -0.11
DDX39B-208ENST00000428098 SLC38A10Q9HBR0 1119 aa14.37□□□□□ -0.11
DDX39B-208ENST00000428098 PRKAG3Q9UGI9 489 aa14.37□□□□□ -0.11
DDX39B-208ENST00000428098 MYO7AQ13402 2215 aa14.36□□□□□ -0.11
DDX39B-208ENST00000428098 F5H6K3 240 aa14.36□□□□□ -0.11
DDX39B-208ENST00000428098 PITPNM1O00562 1244 aa14.36□□□□□ -0.11
DDX39B-208ENST00000428098 ZBED4O75132 1171 aa14.36□□□□□ -0.11
DDX39B-208ENST00000428098 BAIAP3O94812 1187 aa14.36□□□□□ -0.11
DDX39B-208ENST00000428098 PURAQ00577 322 aaKnown RBP14.36□□□□□ -0.11
DDX39B-208ENST00000428098 KLRC3Q07444 240 aa14.36□□□□□ -0.11
DDX39B-208ENST00000428098 POLA2Q14181 598 aa14.36□□□□□ -0.11
DDX39B-208ENST00000428098 HERC4Q5GLZ8 1057 aaPredicted RBP14.36□□□□□ -0.11
DDX39B-208ENST00000428098 C12orf60Q5U649 245 aa14.36□□□□□ -0.11
DDX39B-208ENST00000428098 HOMER2Q9NSB8 354 aa14.36□□□□□ -0.11
DDX39B-208ENST00000428098 DCHS1Q96JQ0 3298 aa14.36□□□□□ -0.11
DDX39B-208ENST00000428098 WDR87Q6ZQQ6 2873 aa14.36□□□□□ -0.11
DDX39B-208ENST00000428098 NAV1Q8NEY1 1877 aa14.35□□□□□ -0.11
DDX39B-208ENST00000428098 E9PSI1 815 aa14.35□□□□□ -0.11
DDX39B-208ENST00000428098 GJB5O95377 273 aa14.35□□□□□ -0.11
DDX39B-208ENST00000428098 NDUFB10O96000 172 aa14.35□□□□□ -0.11
DDX39B-208ENST00000428098 GNAI2P04899 355 aa14.35□□□□□ -0.11
DDX39B-208ENST00000428098 PDE6AP16499 860 aa14.35□□□□□ -0.11
DDX39B-208ENST00000428098 LTBRP36941 435 aa14.35□□□□□ -0.11
DDX39B-208ENST00000428098 KCNJ6P48051 423 aa14.35□□□□□ -0.11
DDX39B-208ENST00000428098 COL19A1Q14993 1142 aa14.35□□□□□ -0.11
DDX39B-208ENST00000428098 SLFNL1Q499Z3 407 aa14.35□□□□□ -0.11
DDX39B-208ENST00000428098 SLC9C2Q5TAH2 1124 aa14.35□□□□□ -0.11
DDX39B-208ENST00000428098 RNF135Q8IUD6 432 aa14.35□□□□□ -0.11
DDX39B-208ENST00000428098 FBXO16Q8IX29 292 aaPredicted RBP14.35□□□□□ -0.11
DDX39B-208ENST00000428098 EDAQ92838 391 aa14.35□□□□□ -0.11
DDX39B-208ENST00000428098 KIFC2Q96AC6 838 aa14.35□□□□□ -0.11
DDX39B-208ENST00000428098 UPF3BQ9BZI7 483 aaKnown RBP14.35□□□□□ -0.11
DDX39B-208ENST00000428098 A1CFQ9NQ94 594 aaKnown RBP14.35□□□□□ -0.11
DDX39B-208ENST00000428098 FBXO40Q9UH90 709 aa14.35□□□□□ -0.11
DDX39B-208ENST00000428098 MYO15AQ9UKN7 3530 aa14.35□□□□□ -0.11
DDX39B-208ENST00000428098 TCRBV5S4A2TA0A5A2 114 aa14.34□□□□□ -0.11
DDX39B-208ENST00000428098 ASB14A6NK59 587 aa14.34□□□□□ -0.11
DDX39B-208ENST00000428098 MYL3P08590 195 aa14.34□□□□□ -0.11
DDX39B-208ENST00000428098 TCEAL5Q5H9L2 206 aa14.34□□□□□ -0.11
DDX39B-208ENST00000428098 FAM47CQ5HY64 1035 aa14.34□□□□□ -0.11
DDX39B-208ENST00000428098 FAM117BQ6P1L5 589 aa14.34□□□□□ -0.11
DDX39B-208ENST00000428098 TMED8Q6PL24 325 aaPredicted RBP14.34□□□□□ -0.11
DDX39B-208ENST00000428098 C16orf86Q6ZW13 317 aa14.34□□□□□ -0.11
DDX39B-208ENST00000428098 FAM9BQ8IZU0 186 aa14.34□□□□□ -0.11
DDX39B-208ENST00000428098 PBXIP1Q96AQ6 731 aa14.34□□□□□ -0.11
DDX39B-208ENST00000428098 PABPC5Q96DU9 382 aaKnown RBP14.34□□□□□ -0.11
DDX39B-208ENST00000428098 MRPL38Q96DV4 380 aaKnown RBP14.34□□□□□ -0.11
DDX39B-208ENST00000428098 PURBQ96QR8 312 aaKnown RBP14.34□□□□□ -0.11
DDX39B-208ENST00000428098 CTAGE1Q96RT6 745 aa14.34□□□□□ -0.11
DDX39B-208ENST00000428098 ARMT1Q9H993 441 aa14.34□□□□□ -0.11
DDX39B-208ENST00000428098 TRIP12Q14669 1992 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms