RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 POLR3DP05423 398 aaPredicted RBP11.17□□□□□ -0.62
LSG1-202ENST00000427461 KCNJ6P48051 423 aa11.17□□□□□ -0.62
LSG1-202ENST00000427461 WDR5P61964 334 aaKnown RBP11.17□□□□□ -0.62
LSG1-202ENST00000427461 CLUL1Q15846 466 aa11.17□□□□□ -0.62
LSG1-202ENST00000427461 SNRNP48Q6IEG0 339 aaKnown RBP11.17□□□□□ -0.62
LSG1-202ENST00000427461 TRIM67Q6ZTA4 783 aa11.17□□□□□ -0.62
LSG1-202ENST00000427461 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.17□□□□□ -0.62
LSG1-202ENST00000427461 C17orf80Q9BSJ5 609 aa11.17□□□□□ -0.62
LSG1-202ENST00000427461 PPP1R9AQ9ULJ8 1098 aa11.17□□□□□ -0.62
LSG1-202ENST00000427461 NAV1Q8NEY1 1877 aa11.17□□□□□ -0.62
LSG1-202ENST00000427461 TRIP12Q14669 1992 aaPredicted RBP11.16□□□□□ -0.62
LSG1-202ENST00000427461 AKR1B1P15121 316 aa11.16□□□□□ -0.62
LSG1-202ENST00000427461 SMPD1P17405 629 aa11.16□□□□□ -0.62
LSG1-202ENST00000427461 RFC2P35250 354 aa11.16□□□□□ -0.62
LSG1-202ENST00000427461 COPB2P35606 906 aa11.16□□□□□ -0.62
LSG1-202ENST00000427461 ZAP70P43403 619 aa11.16□□□□□ -0.62
LSG1-202ENST00000427461 ICA1Q05084 483 aa11.16□□□□□ -0.62
LSG1-202ENST00000427461 TCEAL5Q5H9L2 206 aa11.16□□□□□ -0.62
LSG1-202ENST00000427461 FAM117BQ6P1L5 589 aa11.16□□□□□ -0.62
LSG1-202ENST00000427461 TMEM179Q6ZVK1 233 aa11.16□□□□□ -0.62
LSG1-202ENST00000427461 FBXL6Q8N531 539 aa11.16□□□□□ -0.62
LSG1-202ENST00000427461 PABPC5Q96DU9 382 aaKnown RBP11.16□□□□□ -0.62
LSG1-202ENST00000427461 AP5M1Q9H0R1 490 aa11.16□□□□□ -0.62
LSG1-202ENST00000427461 ARHGEF10LQ9HCE6 1279 aa11.16□□□□□ -0.62
LSG1-202ENST00000427461 PDGFCQ9NRA1 345 aa11.16□□□□□ -0.62
LSG1-202ENST00000427461 TRPC6Q9Y210 931 aa11.16□□□□□ -0.62
LSG1-202ENST00000427461 FAM50BQ9Y247 325 aa11.16□□□□□ -0.62
LSG1-202ENST00000427461 ZFHX4Q86UP3 3567 aa11.16□□□□□ -0.62
LSG1-202ENST00000427461 MYH8P13535 1937 aa11.15□□□□□ -0.62
LSG1-202ENST00000427461 CACNA1HO95180 2353 aa11.15□□□□□ -0.62
LSG1-202ENST00000427461 PRR23AA6NEV1 266 aa11.15□□□□□ -0.62
LSG1-202ENST00000427461 RAD21O60216 631 aa11.15□□□□□ -0.62
LSG1-202ENST00000427461 BAIAP3O94812 1187 aa11.15□□□□□ -0.62
LSG1-202ENST00000427461 SUPT20HL2P0C7V6 817 aa11.15□□□□□ -0.62
LSG1-202ENST00000427461 CYP2D6P10635 497 aa11.15□□□□□ -0.62
LSG1-202ENST00000427461 LTBRP36941 435 aa11.15□□□□□ -0.62
LSG1-202ENST00000427461 CNTN2Q02246 1040 aa11.15□□□□□ -0.62
LSG1-202ENST00000427461 GPNMBQ14956 572 aa11.15□□□□□ -0.62
LSG1-202ENST00000427461 TCTN1Q2MV58 587 aa11.15□□□□□ -0.62
LSG1-202ENST00000427461 TTC39AQ5SRH9 613 aa11.15□□□□□ -0.62
LSG1-202ENST00000427461 FAM83BQ5T0W9 1011 aa11.15□□□□□ -0.62
LSG1-202ENST00000427461 CPXCR1Q8N123 301 aa11.15□□□□□ -0.62
LSG1-202ENST00000427461 MAGEB6Q8N7X4 407 aa11.15□□□□□ -0.62
LSG1-202ENST00000427461 BANK1Q8NDB2 785 aa11.15□□□□□ -0.62
LSG1-202ENST00000427461 FBXO22Q8NEZ5 403 aa11.15□□□□□ -0.62
LSG1-202ENST00000427461 MRPL38Q96DV4 380 aaKnown RBP11.15□□□□□ -0.62
LSG1-202ENST00000427461 RAD9AQ99638 391 aa11.15□□□□□ -0.62
LSG1-202ENST00000427461 TEX13BQ9BXU2 312 aa11.15□□□□□ -0.62
LSG1-202ENST00000427461 SEZ6LQ9BYH1 1024 aa11.15□□□□□ -0.62
LSG1-202ENST00000427461 CLDND1Q9NY35 253 aa11.15□□□□□ -0.62
LSG1-202ENST00000427461 CACNA1GO43497 2377 aa11.14□□□□□ -0.63
LSG1-202ENST00000427461 PROB1E7EW31 1015 aa11.14□□□□□ -0.63
LSG1-202ENST00000427461 SRGAP3O43295 1099 aa11.14□□□□□ -0.63
LSG1-202ENST00000427461 ZEB2O60315 1214 aa11.14□□□□□ -0.63
LSG1-202ENST00000427461 IDH1O75874 414 aaKnown RBP11.14□□□□□ -0.63
LSG1-202ENST00000427461 GJB5O95377 273 aa11.14□□□□□ -0.63
LSG1-202ENST00000427461 DLX2Q07687 328 aaPredicted RBP11.14□□□□□ -0.63
LSG1-202ENST00000427461 SMAD2Q15796 467 aaKnown RBP11.14□□□□□ -0.63
LSG1-202ENST00000427461 FAM47CQ5HY64 1035 aa11.14□□□□□ -0.63
LSG1-202ENST00000427461 ANKRD35Q8N283 1001 aa11.14□□□□□ -0.63
LSG1-202ENST00000427461 RETREG2Q8NC44 543 aa11.14□□□□□ -0.63
LSG1-202ENST00000427461 DYNLL2Q96FJ2 89 aa11.14□□□□□ -0.63
LSG1-202ENST00000427461 NUP88Q99567 741 aaPredicted RBP11.14□□□□□ -0.63
LSG1-202ENST00000427461 DBNDD2Q9BQY9 259 aa11.14□□□□□ -0.63
LSG1-202ENST00000427461 FSD1Q9BTV5 496 aa11.14□□□□□ -0.63
LSG1-202ENST00000427461 KMT2BQ9UMN6 2715 aaPredicted RBP11.14□□□□□ -0.63
LSG1-202ENST00000427461 RIF1Q5UIP0 2472 aaKnown RBP11.13□□□□□ -0.63
LSG1-202ENST00000427461 MBTPS2O43462 519 aa11.13□□□□□ -0.63
LSG1-202ENST00000427461 EEF2P13639 858 aaKnown RBP11.13□□□□□ -0.63
LSG1-202ENST00000427461 AVPR2P30518 371 aa11.13□□□□□ -0.63
LSG1-202ENST00000427461 COL19A1Q14993 1142 aa11.13□□□□□ -0.63
LSG1-202ENST00000427461 PKN1Q16512 942 aa11.13□□□□□ -0.63
LSG1-202ENST00000427461 EEPD1Q7L9B9 569 aa11.13□□□□□ -0.63
LSG1-202ENST00000427461 SSH1Q8WYL5 1049 aa11.13□□□□□ -0.63
LSG1-202ENST00000427461 CRBNQ96SW2 442 aa11.13□□□□□ -0.63
LSG1-202ENST00000427461 MEIS3Q99687 375 aa11.13□□□□□ -0.63
LSG1-202ENST00000427461 SH2D4AQ9H788 454 aa11.13□□□□□ -0.63
LSG1-202ENST00000427461 RAVER2Q9HCJ3 691 aaKnown RBP11.13□□□□□ -0.63
LSG1-202ENST00000427461 FAM186AA6NE01 2351 aa11.13□□□□□ -0.63
LSG1-202ENST00000427461 ATG2AQ2TAZ0 1938 aa11.13□□□□□ -0.63
LSG1-202ENST00000427461 MYO7AQ13402 2215 aa11.12□□□□□ -0.63
LSG1-202ENST00000427461 STXBP3O00186 592 aa11.12□□□□□ -0.63
LSG1-202ENST00000427461 PITPNM1O00562 1244 aa11.12□□□□□ -0.63
LSG1-202ENST00000427461 ZXDAP98168 799 aa11.12□□□□□ -0.63
LSG1-202ENST00000427461 RPAINQ86UA6 219 aa11.12□□□□□ -0.63
LSG1-202ENST00000427461 CNTNAP3BQ96NU0 1288 aa11.12□□□□□ -0.63
LSG1-202ENST00000427461 POP1Q99575 1024 aaKnown RBP11.12□□□□□ -0.63
LSG1-202ENST00000427461 RIOK1Q9BRS2 568 aaKnown RBP11.12□□□□□ -0.63
LSG1-202ENST00000427461 CNTNAP3Q9BZ76 1288 aa11.12□□□□□ -0.63
LSG1-202ENST00000427461 MCM9Q9NXL9 1143 aa11.12□□□□□ -0.63
LSG1-202ENST00000427461 DMXL1Q9Y485 3027 aa11.12□□□□□ -0.63
LSG1-202ENST00000427461 DNAH14Q0VDD8 3507 aa11.12□□□□□ -0.63
LSG1-202ENST00000427461 MYL3P08590 195 aa11.11□□□□□ -0.63
LSG1-202ENST00000427461 PURAQ00577 322 aaKnown RBP11.11□□□□□ -0.63
LSG1-202ENST00000427461 PTPROQ16827 1216 aa11.11□□□□□ -0.63
LSG1-202ENST00000427461 NBPF20Q3BBV1 942 aa11.11□□□□□ -0.63
LSG1-202ENST00000427461 TIGD5Q53EQ6 642 aa11.11□□□□□ -0.63
LSG1-202ENST00000427461 CCDC158Q5M9N0 1113 aa11.11□□□□□ -0.63
LSG1-202ENST00000427461 TAPT1Q6NXT6 567 aa11.11□□□□□ -0.63
LSG1-202ENST00000427461 FBXO16Q8IX29 292 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms