RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 CFAP74Q9C0B2 1584 aa8.41□□□□□ -1.06
C9orf3-205ENST00000427193 INHBBP09529 407 aa8.41□□□□□ -1.06
C9orf3-205ENST00000427193 PNLIPP16233 465 aa8.41□□□□□ -1.06
C9orf3-205ENST00000427193 RTP1P59025 263 aa8.41□□□□□ -1.06
C9orf3-205ENST00000427193 ZNF385BQ569K4 471 aa8.41□□□□□ -1.06
C9orf3-205ENST00000427193 KIAA0825Q8IV33 1275 aa8.41□□□□□ -1.06
C9orf3-205ENST00000427193 SGPP1Q9BX95 441 aa8.41□□□□□ -1.06
C9orf3-205ENST00000427193 ANTXR1Q9H6X2 564 aa8.41□□□□□ -1.06
C9orf3-205ENST00000427193 RFXAPO00287 272 aa8.4□□□□□ -1.06
C9orf3-205ENST00000427193 BMP8BP34820 402 aa8.4□□□□□ -1.06
C9orf3-205ENST00000427193 SRSF3P84103 164 aaKnown RBP8.4□□□□□ -1.06
C9orf3-205ENST00000427193 OLFML2BQ68BL8 750 aa8.4□□□□□ -1.06
C9orf3-205ENST00000427193 GALNT18Q6P9A2 607 aa8.4□□□□□ -1.06
C9orf3-205ENST00000427193 ZPBP2Q6X784 338 aa8.4□□□□□ -1.06
C9orf3-205ENST00000427193 EAF1Q96JC9 268 aaPredicted RBP8.4□□□□□ -1.06
C9orf3-205ENST00000427193 SPON2Q9BUD6 331 aa8.4□□□□□ -1.06
C9orf3-205ENST00000427193 KCTD3Q9Y597 815 aa8.4□□□□□ -1.06
C9orf3-205ENST00000427193 ATP10AO60312 1499 aa8.39□□□□□ -1.07
C9orf3-205ENST00000427193 FADS2P1A8MWK0 482 aa8.39□□□□□ -1.07
C9orf3-205ENST00000427193 AUHQ13825 339 aaKnown RBP8.39□□□□□ -1.07
C9orf3-205ENST00000427193 INTS3Q68E01 1043 aaKnown RBP8.39□□□□□ -1.07
C9orf3-205ENST00000427193 TMEM87AQ8NBN3 555 aa8.39□□□□□ -1.07
C9orf3-205ENST00000427193 DHRS1Q96LJ7 313 aa8.39□□□□□ -1.07
C9orf3-205ENST00000427193 SLC9A7Q96T83 725 aa8.39□□□□□ -1.07
C9orf3-205ENST00000427193 PLCD4Q9BRC7 762 aa8.39□□□□□ -1.07
C9orf3-205ENST00000427193 SIRT5Q9NXA8 310 aa8.39□□□□□ -1.07
C9orf3-205ENST00000427193 GFOD1Q9NXC2 390 aa8.39□□□□□ -1.07
C9orf3-205ENST00000427193 MBD1Q9UIS9 605 aaPredicted RBP8.39□□□□□ -1.07
C9orf3-205ENST00000427193 FBXL21Q9UKT6 434 aa8.39□□□□□ -1.07
C9orf3-205ENST00000427193 MINPP1Q9UNW1 487 aa8.39□□□□□ -1.07
C9orf3-205ENST00000427193 TAF6LQ9Y6J9 622 aa8.39□□□□□ -1.07
C9orf3-205ENST00000427193 RAPGEF6Q8TEU7 1601 aa8.39□□□□□ -1.07
C9orf3-205ENST00000427193 C9orf84Q5VXU9 1444 aa8.38□□□□□ -1.07
C9orf3-205ENST00000427193 WTIPA6NIX2 430 aaPredicted RBP8.38□□□□□ -1.07
C9orf3-205ENST00000427193 ABLIM1O14639 778 aa8.38□□□□□ -1.07
C9orf3-205ENST00000427193 ZNF205O95201 554 aa8.38□□□□□ -1.07
C9orf3-205ENST00000427193 IMPDH2P12268 514 aa8.38□□□□□ -1.07
C9orf3-205ENST00000427193 ERVFRD-1P60508 538 aa8.38□□□□□ -1.07
C9orf3-205ENST00000427193 TCERG1LQ5VWI1 586 aa8.38□□□□□ -1.07
C9orf3-205ENST00000427193 TMEM151BQ8IW70 566 aa8.38□□□□□ -1.07
C9orf3-205ENST00000427193 SUCOQ9UBS9 1254 aaKnown RBP8.38□□□□□ -1.07
C9orf3-205ENST00000427193 RGS17Q9UGC6 210 aaPredicted RBP8.38□□□□□ -1.07
C9orf3-205ENST00000427193 GPR55Q9Y2T6 319 aaPredicted RBP8.38□□□□□ -1.07
C9orf3-205ENST00000427193 TRAPPC8Q9Y2L5 1435 aa8.37□□□□□ -1.07
C9orf3-205ENST00000427193 CTSKP43235 329 aa8.37□□□□□ -1.07
C9orf3-205ENST00000427193 YBX1P67809 324 aaKnown RBP8.37□□□□□ -1.07
C9orf3-205ENST00000427193 HSF5Q4G112 596 aaPredicted RBP8.37□□□□□ -1.07
C9orf3-205ENST00000427193 SIGLEC10Q96LC7 697 aa8.37□□□□□ -1.07
C9orf3-205ENST00000427193 ERVK13-1Q9NX77 482 aa8.37□□□□□ -1.07
C9orf3-205ENST00000427193 ZNRF3Q9ULT6 936 aa8.37□□□□□ -1.07
C9orf3-205ENST00000427193 SRCAPQ6ZRS2 3230 aa8.37□□□□□ -1.07
C9orf3-205ENST00000427193 CCDC18Q5T9S5 1454 aa8.37□□□□□ -1.07
C9orf3-205ENST00000427193 HECW1Q76N89 1606 aa8.36□□□□□ -1.07
C9orf3-205ENST00000427193 TIAM1Q13009 1591 aa8.36□□□□□ -1.07
C9orf3-205ENST00000427193 A0A1W2PQ45 241 aaPredicted RBP8.36□□□□□ -1.07
C9orf3-205ENST00000427193 A0A1W2PQY0 241 aa8.36□□□□□ -1.07
C9orf3-205ENST00000427193 MEIS1O00470 390 aa8.36□□□□□ -1.07
C9orf3-205ENST00000427193 VIPR1P32241 457 aa8.36□□□□□ -1.07
C9orf3-205ENST00000427193 ARL4AP40617 200 aa8.36□□□□□ -1.07
C9orf3-205ENST00000427193 LAPTM5Q13571 262 aa8.36□□□□□ -1.07
C9orf3-205ENST00000427193 LDLRAD1Q5T700 205 aa8.36□□□□□ -1.07
C9orf3-205ENST00000427193 CDADC1Q9BWV3 514 aa8.36□□□□□ -1.07
C9orf3-205ENST00000427193 IRAK3Q9Y616 596 aa8.36□□□□□ -1.07
C9orf3-205ENST00000427193 LRRIQ1Q96JM4 1722 aa8.36□□□□□ -1.07
C9orf3-205ENST00000427193 LRRC9Q6ZRR7 1453 aa8.35□□□□□ -1.07
C9orf3-205ENST00000427193 N4BP3O15049 544 aa8.35□□□□□ -1.07
C9orf3-205ENST00000427193 TOM1O60784 492 aa8.35□□□□□ -1.07
C9orf3-205ENST00000427193 MPOP05164 745 aa8.35□□□□□ -1.07
C9orf3-205ENST00000427193 GSNP06396 782 aa8.35□□□□□ -1.07
C9orf3-205ENST00000427193 VAV1P15498 845 aa8.35□□□□□ -1.07
C9orf3-205ENST00000427193 ZNF76P36508 570 aa8.35□□□□□ -1.07
C9orf3-205ENST00000427193 TMEM62Q0P6H9 643 aa8.35□□□□□ -1.07
C9orf3-205ENST00000427193 SSPNQ14714 243 aa8.35□□□□□ -1.07
C9orf3-205ENST00000427193 SLCO6A1Q86UG4 719 aa8.35□□□□□ -1.07
C9orf3-205ENST00000427193 C7orf61Q8IZ16 206 aa8.35□□□□□ -1.07
C9orf3-205ENST00000427193 TAB3Q8N5C8 712 aaPredicted RBP8.35□□□□□ -1.07
C9orf3-205ENST00000427193 SCAPERQ9BY12 1400 aa8.35□□□□□ -1.07
C9orf3-205ENST00000427193 ACRP10323 421 aa8.34□□□□□ -1.07
C9orf3-205ENST00000427193 CTSWP56202 376 aa8.34□□□□□ -1.07
C9orf3-205ENST00000427193 CRTC3Q6UUV7 619 aa8.34□□□□□ -1.07
C9orf3-205ENST00000427193 CCDC144CPQ8IYA2 1237 aa8.34□□□□□ -1.07
C9orf3-205ENST00000427193 SMARCC1Q92922 1105 aaPredicted RBP8.34□□□□□ -1.07
C9orf3-205ENST00000427193 DSCC1Q9BVC3 393 aa8.34□□□□□ -1.07
C9orf3-205ENST00000427193 CNTD2Q9H8S5 307 aa8.34□□□□□ -1.07
C9orf3-205ENST00000427193 PARD6AQ9NPB6 346 aa8.34□□□□□ -1.07
C9orf3-205ENST00000427193 CDK13Q14004 1512 aaKnown RBP8.34□□□□□ -1.08
C9orf3-205ENST00000427193 NCANO14594 1321 aa8.33□□□□□ -1.08
C9orf3-205ENST00000427193 ZNF16P17020 682 aaPredicted RBP8.33□□□□□ -1.08
C9orf3-205ENST00000427193 PI3P19957 117 aa8.33□□□□□ -1.08
C9orf3-205ENST00000427193 HOXA5P20719 270 aa8.33□□□□□ -1.08
C9orf3-205ENST00000427193 SDHBP21912 280 aa8.33□□□□□ -1.08
C9orf3-205ENST00000427193 PMS1P54277 932 aaKnown RBP8.33□□□□□ -1.08
C9orf3-205ENST00000427193 USP48Q86UV5 1035 aa8.33□□□□□ -1.08
C9orf3-205ENST00000427193 TM9SF2Q99805 663 aa8.33□□□□□ -1.08
C9orf3-205ENST00000427193 METTL5Q9NRN9 209 aaKnown RBP8.33□□□□□ -1.08
C9orf3-205ENST00000427193 AP5S1Q9NUS5 200 aa8.33□□□□□ -1.08
C9orf3-205ENST00000427193 ACSL6Q9UKU0 697 aa8.33□□□□□ -1.08
C9orf3-205ENST00000427193 CAMSAP1Q5T5Y3 1602 aa8.32□□□□□ -1.08
C9orf3-205ENST00000427193 TROQ12816 1431 aaPredicted RBP8.32□□□□□ -1.08
C9orf3-205ENST00000427193 B8ZZF3 427 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms