RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 SLFN13Q68D06 897 aa8.7□□□□□ -1.02
LINC01049-201ENST00000426840 C17orf99Q6UX52 265 aa8.7□□□□□ -1.02
LINC01049-201ENST00000426840 DHX32Q7L7V1 743 aaKnown RBP8.7□□□□□ -1.02
LINC01049-201ENST00000426840 RALYLQ86SE5 291 aaKnown RBP8.7□□□□□ -1.02
LINC01049-201ENST00000426840 IL17RAQ96F46 866 aa8.7□□□□□ -1.02
LINC01049-201ENST00000426840 NUP88Q99567 741 aaPredicted RBP8.7□□□□□ -1.02
LINC01049-201ENST00000426840 NUDT12Q9BQG2 462 aa8.7□□□□□ -1.02
LINC01049-201ENST00000426840 MTA3Q9BTC8 594 aa8.7□□□□□ -1.02
LINC01049-201ENST00000426840 RPAP3Q9H6T3 665 aaPredicted RBP8.7□□□□□ -1.02
LINC01049-201ENST00000426840 SENP2Q9HC62 589 aa8.7□□□□□ -1.02
LINC01049-201ENST00000426840 GOPCQ9HD26 462 aa8.7□□□□□ -1.02
LINC01049-201ENST00000426840 TNKSO95271 1327 aa8.7□□□□□ -1.02
LINC01049-201ENST00000426840 ADGRA2Q96PE1 1338 aa8.7□□□□□ -1.02
LINC01049-201ENST00000426840 LOC285556D6RIA3 1793 aa8.7□□□□□ -1.02
LINC01049-201ENST00000426840 GPR25O00155 361 aa8.69□□□□□ -1.02
LINC01049-201ENST00000426840 WDR46O15213 610 aaKnown RBP8.69□□□□□ -1.02
LINC01049-201ENST00000426840 LILRB3O75022 631 aa8.69□□□□□ -1.02
LINC01049-201ENST00000426840 CPA1P15085 419 aa8.69□□□□□ -1.02
LINC01049-201ENST00000426840 COG2Q14746 738 aa8.69□□□□□ -1.02
LINC01049-201ENST00000426840 SKIV2LQ15477 1246 aaKnown RBP8.69□□□□□ -1.02
LINC01049-201ENST00000426840 NOM1Q5C9Z4 860 aaKnown RBP8.69□□□□□ -1.02
LINC01049-201ENST00000426840 FAM83BQ5T0W9 1011 aa8.69□□□□□ -1.02
LINC01049-201ENST00000426840 ZNF697Q5TEC3 545 aa8.69□□□□□ -1.02
LINC01049-201ENST00000426840 PRPF38BQ5VTL8 546 aaKnown RBP8.69□□□□□ -1.02
LINC01049-201ENST00000426840 GMCL1Q96IK5 515 aa8.69□□□□□ -1.02
LINC01049-201ENST00000426840 TMEM87BQ96K49 555 aa8.69□□□□□ -1.02
LINC01049-201ENST00000426840 UBAC1Q9BSL1 405 aa8.69□□□□□ -1.02
LINC01049-201ENST00000426840 TM6SF1Q9BZW5 370 aa8.69□□□□□ -1.02
LINC01049-201ENST00000426840 FBXO28Q9NVF7 368 aa8.69□□□□□ -1.02
LINC01049-201ENST00000426840 HOXC10Q9NYD6 342 aa8.69□□□□□ -1.02
LINC01049-201ENST00000426840 RBPJLQ9UBG7 517 aa8.69□□□□□ -1.02
LINC01049-201ENST00000426840 CPA4Q9UI42 421 aa8.69□□□□□ -1.02
LINC01049-201ENST00000426840 ADAMTS5Q9UNA0 930 aa8.69□□□□□ -1.02
LINC01049-201ENST00000426840 RLFQ13129 1914 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 SH2B2O14492 632 aaPredicted RBP8.68□□□□□ -1.02
LINC01049-201ENST00000426840 RAD21O60216 631 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 PEX10O60683 326 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 CNMDO75829 334 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 HMGB1P09429 215 aaKnown RBP8.68□□□□□ -1.02
LINC01049-201ENST00000426840 SNHG28P0DPA3 235 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 PDHBP11177 359 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 BCRP11274 1271 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 BMP3P12645 472 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 LIFRP42702 1097 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 CTCFP49711 727 aaPredicted RBP8.68□□□□□ -1.02
LINC01049-201ENST00000426840 HERVK_113P62684 666 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 IRX3P78415 501 aaPredicted RBP8.68□□□□□ -1.02
LINC01049-201ENST00000426840 WTAPQ15007 396 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 TMEM67Q5HYA8 995 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 IFIT1BQ5T764 474 aaKnown RBP8.68□□□□□ -1.02
LINC01049-201ENST00000426840 LBX2Q6XYB7 198 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 RASGRP2Q7LDG7 609 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 TMTC2Q8N394 836 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 PNMA1Q8ND90 353 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 DCAF4Q8WV16 495 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 CHMP4CQ96CF2 233 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 TCEANC2Q96MN5 208 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 JAKMIP1Q96N16 626 aaKnown RBP8.68□□□□□ -1.02
LINC01049-201ENST00000426840 PARK7Q99497 189 aaKnown RBP8.68□□□□□ -1.02
LINC01049-201ENST00000426840 LRRC2Q9BYS8 371 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 KAT14Q9H8E8 782 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 LY9Q9HBG7 655 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 TXNRD2Q9NNW7 524 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 MORF4L1Q9UBU8 362 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 FEM1BQ9UK73 627 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 WDR19Q8NEZ3 1342 aa8.68□□□□□ -1.02
LINC01049-201ENST00000426840 CEP350Q5VT06 3117 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 ERICH2A1L162 156 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 TMEM232C9JQI7 657 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 PLA2G6O60733 806 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 FLOT1O75955 427 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 RPS6KB1P23443 525 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 PSMA5P28066 241 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 SLC1A4P43007 532 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 GCLCP48506 637 aaPredicted RBP8.67□□□□□ -1.02
LINC01049-201ENST00000426840 LBX1P52954 281 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 ANAPC15P60006 121 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 CAP1Q01518 475 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 SP3Q02447 781 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 ZNF543Q08ER8 600 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 TROAPQ12815 778 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 FOXC1Q12948 553 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 SART3Q15020 963 aaKnown RBP8.67□□□□□ -1.02
LINC01049-201ENST00000426840 TTBK2Q6IQ55 1244 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 BLOC1S2Q6QNY1 142 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 BTNL9Q6UXG8 535 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 KCTD1Q719H9 257 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 RUFY3Q7L099 469 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 ZNF598Q86UK7 904 aaKnown RBP8.67□□□□□ -1.02
LINC01049-201ENST00000426840 FBXL16Q8N461 479 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 PRPF38AQ8NAV1 312 aaKnown RBP8.67□□□□□ -1.02
LINC01049-201ENST00000426840 ZNF296Q8WUU4 475 aaPredicted RBP8.67□□□□□ -1.02
LINC01049-201ENST00000426840 ATG4CQ96DT6 458 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 AGXT2Q9BYV1 514 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 BACH2Q9BYV9 841 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 TANGO6Q9C0B7 1094 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 BTBD7Q9P203 1132 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 PPP1R9AQ9ULJ8 1098 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 MTMR7Q9Y216 660 aa8.67□□□□□ -1.02
LINC01049-201ENST00000426840 CASP8AP2Q9UKL3 1982 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms