RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 SLC52A2Q9HAB3 445 aa8.34□□□□□ -1.07
SSBP3-207ENST00000426150 PRDM5Q9NQX1 630 aaPredicted RBP8.34□□□□□ -1.07
SSBP3-207ENST00000426150 GPR55Q9Y2T6 319 aaPredicted RBP8.34□□□□□ -1.07
SSBP3-207ENST00000426150 SF3B6Q9Y3B4 125 aaKnown RBP8.34□□□□□ -1.07
SSBP3-207ENST00000426150 KIAA0556O60303 1618 aa8.33□□□□□ -1.08
SSBP3-207ENST00000426150 PRAMEF1O95521 474 aa8.33□□□□□ -1.08
SSBP3-207ENST00000426150 SCG5P05408 212 aa8.33□□□□□ -1.08
SSBP3-207ENST00000426150 SNRPB2P08579 225 aaKnown RBP8.33□□□□□ -1.08
SSBP3-207ENST00000426150 PDGFRBP09619 1106 aa8.33□□□□□ -1.08
SSBP3-207ENST00000426150 FAM87AP0C7U9 286 aa8.33□□□□□ -1.08
SSBP3-207ENST00000426150 KCNJ6P48051 423 aa8.33□□□□□ -1.08
SSBP3-207ENST00000426150 CEBPAP49715 358 aaPredicted RBP8.33□□□□□ -1.08
SSBP3-207ENST00000426150 NFKB2Q00653 900 aa8.33□□□□□ -1.08
SSBP3-207ENST00000426150 AMPD2Q01433 879 aa8.33□□□□□ -1.08
SSBP3-207ENST00000426150 NTRK3Q16288 839 aa8.33□□□□□ -1.08
SSBP3-207ENST00000426150 FAM214BQ7L5A3 538 aa8.33□□□□□ -1.08
SSBP3-207ENST00000426150 C1orf159Q96HA4 380 aa8.33□□□□□ -1.08
SSBP3-207ENST00000426150 CYP26B1Q9NR63 512 aa8.33□□□□□ -1.08
SSBP3-207ENST00000426150 CHST7Q9NS84 486 aa8.33□□□□□ -1.08
SSBP3-207ENST00000426150 KCNH3Q9ULD8 1083 aa8.33□□□□□ -1.08
SSBP3-207ENST00000426150 FANCAO15360 1455 aa8.32□□□□□ -1.08
SSBP3-207ENST00000426150 H0Y8X5 98 aa8.32□□□□□ -1.08
SSBP3-207ENST00000426150 EFCAB14O75071 495 aa8.32□□□□□ -1.08
SSBP3-207ENST00000426150 VAMP4O75379 141 aa8.32□□□□□ -1.08
SSBP3-207ENST00000426150 CBX7O95931 251 aa8.32□□□□□ -1.08
SSBP3-207ENST00000426150 ITIH2P19823 946 aa8.32□□□□□ -1.08
SSBP3-207ENST00000426150 KIR3DL1P43629 444 aa8.32□□□□□ -1.08
SSBP3-207ENST00000426150 NMIQ13287 307 aaPredicted RBP8.32□□□□□ -1.08
SSBP3-207ENST00000426150 SLC35F1Q5T1Q4 408 aa8.32□□□□□ -1.08
SSBP3-207ENST00000426150 DDX42Q86XP3 938 aaKnown RBP eCLIP8.32□□□□□ -1.08
SSBP3-207ENST00000426150 DDX1Q92499 740 aaKnown RBP8.32□□□□□ -1.08
SSBP3-207ENST00000426150 PTPRN2Q92932 1015 aa8.32□□□□□ -1.08
SSBP3-207ENST00000426150 SCARF2Q96GP6 870 aaPredicted RBP8.32□□□□□ -1.08
SSBP3-207ENST00000426150 HOMER2Q9NSB8 354 aa8.32□□□□□ -1.08
SSBP3-207ENST00000426150 MINPP1Q9UNW1 487 aa8.32□□□□□ -1.08
SSBP3-207ENST00000426150 UGGT2Q9NYU1 1516 aa8.32□□□□□ -1.08
SSBP3-207ENST00000426150 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.31□□□□□ -1.08
SSBP3-207ENST00000426150 FAM83GA6ND36 823 aa8.31□□□□□ -1.08
SSBP3-207ENST00000426150 DHX15O43143 795 aaKnown RBP8.31□□□□□ -1.08
SSBP3-207ENST00000426150 CPP00450 1065 aa8.31□□□□□ -1.08
SSBP3-207ENST00000426150 ECI1P42126 302 aa8.31□□□□□ -1.08
SSBP3-207ENST00000426150 EVA1CP58658 441 aa8.31□□□□□ -1.08
SSBP3-207ENST00000426150 CYP4F3Q08477 520 aa8.31□□□□□ -1.08
SSBP3-207ENST00000426150 PRSS53Q2L4Q9 553 aa8.31□□□□□ -1.08
SSBP3-207ENST00000426150 DPY19L1Q2PZI1 675 aa8.31□□□□□ -1.08
SSBP3-207ENST00000426150 FGD2Q7Z6J4 655 aa8.31□□□□□ -1.08
SSBP3-207ENST00000426150 FERMT3Q86UX7 667 aa8.31□□□□□ -1.08
SSBP3-207ENST00000426150 PPM1KQ8N3J5 372 aa8.31□□□□□ -1.08
SSBP3-207ENST00000426150 ASCC2Q9H1I8 757 aaPredicted RBP8.31□□□□□ -1.08
SSBP3-207ENST00000426150 MCM8Q9UJA3 840 aa8.31□□□□□ -1.08
SSBP3-207ENST00000426150 NEO1Q92859 1461 aa8.31□□□□□ -1.08
SSBP3-207ENST00000426150 STRCQ7RTU9 1775 aa8.3□□□□□ -1.08
SSBP3-207ENST00000426150 AKNAQ7Z591 1439 aa8.3□□□□□ -1.08
SSBP3-207ENST00000426150 MEIS1O00470 390 aa8.3□□□□□ -1.08
SSBP3-207ENST00000426150 S100BP04271 92 aaPredicted RBP8.3□□□□□ -1.08
SSBP3-207ENST00000426150 C22orf34Q6ZV56 151 aa8.3□□□□□ -1.08
SSBP3-207ENST00000426150 MAMDC2Q7Z304 686 aaPredicted RBP8.3□□□□□ -1.08
SSBP3-207ENST00000426150 CLEC10AQ8IUN9 316 aa8.3□□□□□ -1.08
SSBP3-207ENST00000426150 AFAP1L2Q8N4X5 818 aa8.3□□□□□ -1.08
SSBP3-207ENST00000426150 GATA6Q92908 595 aa8.3□□□□□ -1.08
SSBP3-207ENST00000426150 SCLYQ96I15 445 aa8.3□□□□□ -1.08
SSBP3-207ENST00000426150 HEXIM2Q96MH2 286 aaKnown RBP8.3□□□□□ -1.08
SSBP3-207ENST00000426150 GTF2IRD1Q9UHL9 959 aa8.3□□□□□ -1.08
SSBP3-207ENST00000426150 TNPO3Q9Y5L0 923 aaKnown RBP8.3□□□□□ -1.08
SSBP3-207ENST00000426150 PREX1Q8TCU6 1659 aa8.3□□□□□ -1.08
SSBP3-207ENST00000426150 FER1L4A9Z1Z3 1794 aa8.3□□□□□ -1.08
SSBP3-207ENST00000426150 ARHGEF40Q8TER5 1519 aa8.29□□□□□ -1.08
SSBP3-207ENST00000426150 SHISA3A0PJX4 238 aa8.29□□□□□ -1.08
SSBP3-207ENST00000426150 PRR33A8MZF0 331 aa8.29□□□□□ -1.08
SSBP3-207ENST00000426150 ASLP04424 464 aa8.29□□□□□ -1.08
SSBP3-207ENST00000426150 GSNP06396 782 aa8.29□□□□□ -1.08
SSBP3-207ENST00000426150 POU3F2P20265 443 aaPredicted RBP8.29□□□□□ -1.08
SSBP3-207ENST00000426150 CTSKP43235 329 aa8.29□□□□□ -1.08
SSBP3-207ENST00000426150 POU4F1Q01851 419 aa8.29□□□□□ -1.08
SSBP3-207ENST00000426150 SCRN1Q12765 414 aa8.29□□□□□ -1.08
SSBP3-207ENST00000426150 DENND5AQ6IQ26 1287 aa8.29□□□□□ -1.08
SSBP3-207ENST00000426150 OGFOD3Q6PK18 319 aa8.29□□□□□ -1.08
SSBP3-207ENST00000426150 USP53Q70EK8 1073 aa8.29□□□□□ -1.08
SSBP3-207ENST00000426150 ALYREFQ86V81 257 aaKnown RBP8.29□□□□□ -1.08
SSBP3-207ENST00000426150 KREMEN2Q8NCW0 462 aa8.29□□□□□ -1.08
SSBP3-207ENST00000426150 FAM83CQ9BQN1 747 aa8.29□□□□□ -1.08
SSBP3-207ENST00000426150 MCMBPQ9BTE3 642 aa8.29□□□□□ -1.08
SSBP3-207ENST00000426150 FRMPD1Q5SYB0 1578 aa8.29□□□□□ -1.08
SSBP3-207ENST00000426150 UHRF1BP1Q6BDS2 1440 aa8.29□□□□□ -1.08
SSBP3-207ENST00000426150 DENND4BO75064 1496 aaPredicted RBP8.28□□□□□ -1.08
SSBP3-207ENST00000426150 IGF2BP3O00425 579 aaKnown RBP eCLIP8.28□□□□□ -1.08
SSBP3-207ENST00000426150 OPA1O60313 960 aa8.28□□□□□ -1.08
SSBP3-207ENST00000426150 PARNO95453 639 aaKnown RBP8.28□□□□□ -1.08
SSBP3-207ENST00000426150 ZNF865P0CJ78 1059 aaPredicted RBP8.28□□□□□ -1.08
SSBP3-207ENST00000426150 ADMP35318 185 aa8.28□□□□□ -1.08
SSBP3-207ENST00000426150 TNK2Q07912 1038 aa8.28□□□□□ -1.08
SSBP3-207ENST00000426150 ZNF460Q14592 562 aa8.28□□□□□ -1.08
SSBP3-207ENST00000426150 CWF19L1Q69YN2 538 aaKnown RBP8.28□□□□□ -1.08
SSBP3-207ENST00000426150 CRTC3Q6UUV7 619 aa8.28□□□□□ -1.08
SSBP3-207ENST00000426150 DDX46Q7L014 1031 aaKnown RBP8.28□□□□□ -1.08
SSBP3-207ENST00000426150 AHI1Q8N157 1196 aa8.28□□□□□ -1.08
SSBP3-207ENST00000426150 PIWIL2Q8TC59 973 aaKnown RBP8.28□□□□□ -1.08
SSBP3-207ENST00000426150 ENOX1Q8TC92 643 aaKnown RBP8.28□□□□□ -1.08
SSBP3-207ENST00000426150 DCAF4Q8WV16 495 aa8.28□□□□□ -1.08
SSBP3-207ENST00000426150 LEO1Q8WVC0 666 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms