RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 CDC23Q9UJX2 597 aa14.56□□□□□ -0.08
COL12A1-205ENST00000425443 REXO2Q9Y3B8 237 aaKnown RBP14.56□□□□□ -0.08
COL12A1-205ENST00000425443 FAM205AQ6ZU69 1335 aa14.56□□□□□ -0.08
COL12A1-205ENST00000425443 SERPINB2P05120 415 aa14.56□□□□□ -0.08
COL12A1-205ENST00000425443 RHOXF2BP0C7M4 288 aa14.56□□□□□ -0.08
COL12A1-205ENST00000425443 ATP2B4P23634 1241 aa14.56□□□□□ -0.08
COL12A1-205ENST00000425443 NOP2P46087 812 aaKnown RBP14.56□□□□□ -0.08
COL12A1-205ENST00000425443 SOGA3Q5TF21 947 aa14.56□□□□□ -0.08
COL12A1-205ENST00000425443 SLF1Q9BQI6 1058 aa14.56□□□□□ -0.08
COL12A1-205ENST00000425443 RHOXF2Q9BQY4 288 aa14.56□□□□□ -0.08
COL12A1-205ENST00000425443 RMND1Q9NWS8 449 aa14.56□□□□□ -0.08
COL12A1-205ENST00000425443 ATP8B1O43520 1251 aa14.55□□□□□ -0.08
COL12A1-205ENST00000425443 GTPBP6O43824 516 aaPredicted RBP14.55□□□□□ -0.08
COL12A1-205ENST00000425443 KIF5CO60282 957 aa14.55□□□□□ -0.08
COL12A1-205ENST00000425443 PLCG2P16885 1265 aa14.55□□□□□ -0.08
COL12A1-205ENST00000425443 PMS1P54277 932 aaKnown RBP14.55□□□□□ -0.08
COL12A1-205ENST00000425443 ARL6IP4Q66PJ3 421 aaKnown RBP14.55□□□□□ -0.08
COL12A1-205ENST00000425443 SLF2Q8IX21 1173 aa14.55□□□□□ -0.08
COL12A1-205ENST00000425443 NELFBQ8WX92 580 aa14.55□□□□□ -0.08
COL12A1-205ENST00000425443 BTAF1O14981 1849 aa14.55□□□□□ -0.08
COL12A1-205ENST00000425443 CASZ1Q86V15 1759 aa14.55□□□□□ -0.08
COL12A1-205ENST00000425443 PARP1P09874 1014 aaKnown RBP14.55□□□□□ -0.08
COL12A1-205ENST00000425443 CDK8P49336 464 aa14.55□□□□□ -0.08
COL12A1-205ENST00000425443 PPP4CP60510 307 aa14.55□□□□□ -0.08
COL12A1-205ENST00000425443 MCM6Q14566 821 aa14.55□□□□□ -0.08
COL12A1-205ENST00000425443 NOA1Q8NC60 698 aaKnown RBP14.55□□□□□ -0.08
COL12A1-205ENST00000425443 PDE11AQ9HCR9 933 aa14.55□□□□□ -0.08
COL12A1-205ENST00000425443 ABCB6Q9NP58 842 aa14.55□□□□□ -0.08
COL12A1-205ENST00000425443 MKRN1Q9UHC7 482 aaKnown RBP14.55□□□□□ -0.08
COL12A1-205ENST00000425443 RASA1P20936 1047 aa14.55□□□□□ -0.08
COL12A1-205ENST00000425443 FECHP22830 423 aa14.55□□□□□ -0.08
COL12A1-205ENST00000425443 VSNL1P62760 191 aa14.55□□□□□ -0.08
COL12A1-205ENST00000425443 UBXN1Q04323 297 aa14.55□□□□□ -0.08
COL12A1-205ENST00000425443 PAK1Q13153 545 aa14.55□□□□□ -0.08
COL12A1-205ENST00000425443 PICALMQ13492 652 aa14.55□□□□□ -0.08
COL12A1-205ENST00000425443 NCAPH2Q6IBW4 605 aa14.55□□□□□ -0.08
COL12A1-205ENST00000425443 IRF2BP1Q8IU81 584 aa14.55□□□□□ -0.08
COL12A1-205ENST00000425443 LRRC15Q8TF66 581 aa14.55□□□□□ -0.08
COL12A1-205ENST00000425443 DLEC1Q9Y238 1755 aa14.54□□□□□ -0.08
COL12A1-205ENST00000425443 F8W031 263 aaPredicted RBP14.54□□□□□ -0.08
COL12A1-205ENST00000425443 RIMBP2O15034 1052 aa14.54□□□□□ -0.08
COL12A1-205ENST00000425443 RPN1P04843 607 aaKnown RBP14.54□□□□□ -0.08
COL12A1-205ENST00000425443 LETM2Q2VYF4 491 aa14.54□□□□□ -0.08
COL12A1-205ENST00000425443 ICE2Q659A1 982 aa14.54□□□□□ -0.08
COL12A1-205ENST00000425443 TYW1BQ6NUM6 668 aa14.54□□□□□ -0.08
COL12A1-205ENST00000425443 USP17L2Q6R6M4 530 aa14.54□□□□□ -0.08
COL12A1-205ENST00000425443 GJD4Q96KN9 370 aaPredicted RBP14.54□□□□□ -0.08
COL12A1-205ENST00000425443 LIMA1Q9UHB6 759 aaKnown RBP14.54□□□□□ -0.08
COL12A1-205ENST00000425443 CCDC151A5D8V7 595 aa14.54□□□□□ -0.08
COL12A1-205ENST00000425443 NT5C2P49902 561 aa14.54□□□□□ -0.08
COL12A1-205ENST00000425443 COPB1P53618 953 aaKnown RBP14.54□□□□□ -0.08
COL12A1-205ENST00000425443 BIRC2Q13490 618 aa14.54□□□□□ -0.08
COL12A1-205ENST00000425443 RRP36Q96EU6 259 aaKnown RBP14.54□□□□□ -0.08
COL12A1-205ENST00000425443 UIMC1Q96RL1 719 aa14.54□□□□□ -0.08
COL12A1-205ENST00000425443 NAA15Q9BXJ9 866 aaKnown RBP14.54□□□□□ -0.08
COL12A1-205ENST00000425443 RTFDC1Q9BY42 306 aaPredicted RBP14.54□□□□□ -0.08
COL12A1-205ENST00000425443 TCP11L1Q9NUJ3 509 aa14.54□□□□□ -0.08
COL12A1-205ENST00000425443 PCDHA6Q9UN73 950 aa14.54□□□□□ -0.08
COL12A1-205ENST00000425443 PCDHA8Q9Y5H6 950 aa14.54□□□□□ -0.08
COL12A1-205ENST00000425443 NKRFO15226 690 aaKnown RBP eCLIP14.53□□□□□ -0.08
COL12A1-205ENST00000425443 KRT9P35527 623 aa14.53□□□□□ -0.08
COL12A1-205ENST00000425443 PRCPP42785 496 aa14.53□□□□□ -0.08
COL12A1-205ENST00000425443 TCP11X2Q5H9J9 407 aa14.53□□□□□ -0.08
COL12A1-205ENST00000425443 LZTS2Q9BRK4 669 aa14.53□□□□□ -0.08
COL12A1-205ENST00000425443 LRRC4BQ9NT99 713 aa14.53□□□□□ -0.08
COL12A1-205ENST00000425443 BARHL2Q9NY43 387 aa14.53□□□□□ -0.08
COL12A1-205ENST00000425443 HDAC6Q9UBN7 1215 aa14.53□□□□□ -0.08
COL12A1-205ENST00000425443 ADAM21Q9UKJ8 722 aa14.53□□□□□ -0.08
COL12A1-205ENST00000425443 G3V3G9 751 aa14.53□□□□□ -0.08
COL12A1-205ENST00000425443 CYTH3O43739 400 aa14.53□□□□□ -0.08
COL12A1-205ENST00000425443 DCAF8Q5TAQ9 597 aa14.53□□□□□ -0.08
COL12A1-205ENST00000425443 C6orf50Q9HD87 102 aa14.53□□□□□ -0.08
COL12A1-205ENST00000425443 GUCA1BQ9UMX6 200 aa14.53□□□□□ -0.08
COL12A1-205ENST00000425443 IRS2Q9Y4H2 1338 aa14.53□□□□□ -0.08
COL12A1-205ENST00000425443 ZNF831Q5JPB2 1677 aa14.53□□□□□ -0.08
COL12A1-205ENST00000425443 SMCO2A6NFE2 343 aa14.52□□□□□ -0.08
COL12A1-205ENST00000425443 LRRC10BA6NIK2 292 aa14.52□□□□□ -0.08
COL12A1-205ENST00000425443 KCNJ18B7U540 433 aa14.52□□□□□ -0.08
COL12A1-205ENST00000425443 ENC1O14682 589 aa14.52□□□□□ -0.08
COL12A1-205ENST00000425443 CCNT1O60563 726 aaKnown RBP14.52□□□□□ -0.08
COL12A1-205ENST00000425443 GTF2IP78347 998 aa14.52□□□□□ -0.08
COL12A1-205ENST00000425443 RAD51AP2Q09MP3 1159 aa14.52□□□□□ -0.08
COL12A1-205ENST00000425443 STIM1Q13586 685 aa14.52□□□□□ -0.08
COL12A1-205ENST00000425443 KCNJ12Q14500 433 aa14.52□□□□□ -0.08
COL12A1-205ENST00000425443 GALNT17Q6IS24 598 aa14.52□□□□□ -0.08
COL12A1-205ENST00000425443 CNGA4Q8IV77 575 aa14.52□□□□□ -0.08
COL12A1-205ENST00000425443 C4orf32Q8N8J7 132 aa14.52□□□□□ -0.08
COL12A1-205ENST00000425443 MSANTD4Q8NCY6 345 aa14.52□□□□□ -0.08
COL12A1-205ENST00000425443 ANKS1AQ92625 1134 aa14.52□□□□□ -0.08
COL12A1-205ENST00000425443 PCMTD1Q96MG8 357 aaPredicted RBP14.52□□□□□ -0.08
COL12A1-205ENST00000425443 HINFPQ9BQA5 517 aa14.52□□□□□ -0.08
COL12A1-205ENST00000425443 DISC1Q9NRI5 854 aa14.52□□□□□ -0.08
COL12A1-205ENST00000425443 RAB21Q9UL25 225 aa14.52□□□□□ -0.08
COL12A1-205ENST00000425443 ITIH6Q6UXX5 1313 aa14.52□□□□□ -0.08
COL12A1-205ENST00000425443 EP400Q96L91 3159 aa14.52□□□□□ -0.08
COL12A1-205ENST00000425443 CTAGE9A4FU28 777 aa14.52□□□□□ -0.08
COL12A1-205ENST00000425443 ADRA2BP18089 450 aa14.52□□□□□ -0.08
COL12A1-205ENST00000425443 ZNF658Q5TYW1 1059 aaPredicted RBP14.52□□□□□ -0.08
COL12A1-205ENST00000425443 C10orf67Q8IYJ2 551 aa14.52□□□□□ -0.08
COL12A1-205ENST00000425443 TMEM60Q9H2L4 133 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms