RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 PPP4R3BQ5MIZ7 849 aa18.56■□□□□ 0.56
RPUSD3-204ENST00000424438 IQSEC1Q6DN90 963 aa18.56■□□□□ 0.56
RPUSD3-204ENST00000424438 TLK2Q86UE8 772 aa18.56■□□□□ 0.56
RPUSD3-204ENST00000424438 KBTBD3Q8NAB2 608 aa18.56■□□□□ 0.56
RPUSD3-204ENST00000424438 APPBP2Q92624 585 aa18.56■□□□□ 0.56
RPUSD3-204ENST00000424438 CEP95Q96GE4 821 aa18.56■□□□□ 0.56
RPUSD3-204ENST00000424438 GMCL1Q96IK5 515 aa18.56■□□□□ 0.56
RPUSD3-204ENST00000424438 EPHX3Q9H6B9 360 aa18.56■□□□□ 0.56
RPUSD3-204ENST00000424438 MUC6Q6W4X9 2439 aa18.56■□□□□ 0.56
RPUSD3-204ENST00000424438 PRRC2BQ5JSZ5 2229 aaKnown RBP18.55■□□□□ 0.56
RPUSD3-204ENST00000424438 GRIN2DO15399 1336 aa18.55■□□□□ 0.56
RPUSD3-204ENST00000424438 CNTN2Q02246 1040 aa18.55■□□□□ 0.56
RPUSD3-204ENST00000424438 TFF2Q03403 129 aa18.55■□□□□ 0.56
RPUSD3-204ENST00000424438 CXCL17Q6UXB2 119 aa18.55■□□□□ 0.56
RPUSD3-204ENST00000424438 ZNF444Q8N0Y2 327 aaPredicted RBP18.55■□□□□ 0.56
RPUSD3-204ENST00000424438 NEDD1Q8NHV4 660 aa18.55■□□□□ 0.56
RPUSD3-204ENST00000424438 MORC4Q8TE76 937 aa18.55■□□□□ 0.56
RPUSD3-204ENST00000424438 CHURC1Q8WUH1 139 aa18.55■□□□□ 0.56
RPUSD3-204ENST00000424438 NKX2-4Q9H2Z4 354 aa18.55■□□□□ 0.56
RPUSD3-204ENST00000424438 A1CFQ9NQ94 594 aaKnown RBP18.55■□□□□ 0.56
RPUSD3-204ENST00000424438 YBX2Q9Y2T7 364 aaKnown RBP18.55■□□□□ 0.56
RPUSD3-204ENST00000424438 ZNF536O15090 1300 aa18.54■□□□□ 0.56
RPUSD3-204ENST00000424438 KCNQ1P51787 676 aa18.54■□□□□ 0.56
RPUSD3-204ENST00000424438 STAT2P52630 851 aa18.54■□□□□ 0.56
RPUSD3-204ENST00000424438 OSBP2Q969R2 916 aa18.54■□□□□ 0.56
RPUSD3-204ENST00000424438 LRRCC1Q9C099 1032 aa18.54■□□□□ 0.56
RPUSD3-204ENST00000424438 AP5M1Q9H0R1 490 aa18.54■□□□□ 0.56
RPUSD3-204ENST00000424438 SLC4A7Q9Y6M7 1214 aa18.54■□□□□ 0.56
RPUSD3-204ENST00000424438 SCN10AQ9Y5Y9 1956 aa18.53■□□□□ 0.56
RPUSD3-204ENST00000424438 LCTP09848 1927 aa18.53■□□□□ 0.56
RPUSD3-204ENST00000424438 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.53■□□□□ 0.56
RPUSD3-204ENST00000424438 SOWAHBA6NEL2 793 aa18.53■□□□□ 0.56
RPUSD3-204ENST00000424438 SUPT20HL2P0C7V6 817 aa18.53■□□□□ 0.56
RPUSD3-204ENST00000424438 BEX3Q00994 111 aa18.53■□□□□ 0.56
RPUSD3-204ENST00000424438 SLFN13Q68D06 897 aa18.53■□□□□ 0.56
RPUSD3-204ENST00000424438 ALYREFQ86V81 257 aaKnown RBP18.53■□□□□ 0.56
RPUSD3-204ENST00000424438 STAG1Q8WVM7 1258 aa18.53■□□□□ 0.56
RPUSD3-204ENST00000424438 WNT8AQ9H1J5 351 aa18.53■□□□□ 0.56
RPUSD3-204ENST00000424438 EPB41L4AQ9HCS5 686 aaPredicted RBP18.53■□□□□ 0.56
RPUSD3-204ENST00000424438 VTA1Q9NP79 307 aa18.53■□□□□ 0.56
RPUSD3-204ENST00000424438 ECHDC1Q9NTX5 307 aa18.53■□□□□ 0.56
RPUSD3-204ENST00000424438 RNF146Q9NTX7 359 aa18.53■□□□□ 0.56
RPUSD3-204ENST00000424438 MINDY4BA8MYZ0 360 aa18.52■□□□□ 0.56
RPUSD3-204ENST00000424438 ERC2O15083 957 aa18.52■□□□□ 0.56
RPUSD3-204ENST00000424438 GTPBP6O43824 516 aaPredicted RBP18.52■□□□□ 0.56
RPUSD3-204ENST00000424438 B4GALT4O60513 344 aa18.52■□□□□ 0.56
RPUSD3-204ENST00000424438 HNRNPUQ00839 825 aaKnown RBP eCLIP18.52■□□□□ 0.56
RPUSD3-204ENST00000424438 PPP2R2DQ66LE6 453 aa18.52■□□□□ 0.56
RPUSD3-204ENST00000424438 TAPT1Q6NXT6 567 aa18.52■□□□□ 0.56
RPUSD3-204ENST00000424438 VWCEQ96DN2 955 aa18.52■□□□□ 0.56
RPUSD3-204ENST00000424438 AGBL1Q96MI9 1066 aa18.52■□□□□ 0.56
RPUSD3-204ENST00000424438 COG6Q9Y2V7 657 aa18.52■□□□□ 0.56
RPUSD3-204ENST00000424438 TCF20Q9UGU0 1960 aaKnown RBP18.51■□□□□ 0.55
RPUSD3-204ENST00000424438 UMODL1Q5DID0 1318 aa18.51■□□□□ 0.55
RPUSD3-204ENST00000424438 TMEM232C9JQI7 657 aa18.51■□□□□ 0.55
RPUSD3-204ENST00000424438 RNF113AO15541 343 aaKnown RBP18.51■□□□□ 0.55
RPUSD3-204ENST00000424438 GPAA1O43292 621 aa18.51■□□□□ 0.55
RPUSD3-204ENST00000424438 SMPD1P17405 629 aa18.51■□□□□ 0.55
RPUSD3-204ENST00000424438 SLC4A3P48751 1232 aa18.51■□□□□ 0.55
RPUSD3-204ENST00000424438 PDE4BQ07343 736 aa18.51■□□□□ 0.55
RPUSD3-204ENST00000424438 LRRFIP1Q32MZ4 808 aaKnown RBP18.51■□□□□ 0.55
RPUSD3-204ENST00000424438 NOL8Q76FK4 1167 aaKnown RBP18.51■□□□□ 0.55
RPUSD3-204ENST00000424438 OTOP2Q7RTS6 562 aa18.51■□□□□ 0.55
RPUSD3-204ENST00000424438 ALDH8A1Q9H2A2 487 aaPredicted RBP18.51■□□□□ 0.55
RPUSD3-204ENST00000424438 REV3LO60673 3130 aa18.51■□□□□ 0.55
RPUSD3-204ENST00000424438 GPR37L1O60883 481 aa18.5■□□□□ 0.55
RPUSD3-204ENST00000424438 ATP2A2P16615 1042 aaKnown RBP18.5■□□□□ 0.55
RPUSD3-204ENST00000424438 RFC2P35250 354 aa18.5■□□□□ 0.55
RPUSD3-204ENST00000424438 TDO2P48775 406 aa18.5■□□□□ 0.55
RPUSD3-204ENST00000424438 DUSP28Q4G0W2 176 aa18.5■□□□□ 0.55
RPUSD3-204ENST00000424438 LRRC47Q8N1G4 583 aaKnown RBP18.5■□□□□ 0.55
RPUSD3-204ENST00000424438 PHOSPHO2Q8TCD6 241 aa18.5■□□□□ 0.55
RPUSD3-204ENST00000424438 TRERF1Q96PN7 1200 aa18.5■□□□□ 0.55
RPUSD3-204ENST00000424438 TRPV6Q9H1D0 765 aa18.5■□□□□ 0.55
RPUSD3-204ENST00000424438 POLR3EQ9NVU0 708 aa18.5■□□□□ 0.55
RPUSD3-204ENST00000424438 CYP39A1Q9NYL5 469 aa18.5■□□□□ 0.55
RPUSD3-204ENST00000424438 COG5Q9UP83 839 aa18.5■□□□□ 0.55
RPUSD3-204ENST00000424438 BRWD1Q9NSI6 2320 aa18.5■□□□□ 0.55
RPUSD3-204ENST00000424438 PATL2C9JE40 543 aaKnown RBP18.49■□□□□ 0.55
RPUSD3-204ENST00000424438 DYNC1LI2O43237 492 aaPredicted RBP18.49■□□□□ 0.55
RPUSD3-204ENST00000424438 SLC3A2P08195 630 aaKnown RBP18.49■□□□□ 0.55
RPUSD3-204ENST00000424438 TSPY3P0CV98 308 aa18.49■□□□□ 0.55
RPUSD3-204ENST00000424438 TSPY8P0CW00 308 aa18.49■□□□□ 0.55
RPUSD3-204ENST00000424438 SLC1A4P43007 532 aa18.49■□□□□ 0.55
RPUSD3-204ENST00000424438 CCL23P55773 120 aa18.49■□□□□ 0.55
RPUSD3-204ENST00000424438 IFNL3Q8IZI9 196 aa18.49■□□□□ 0.55
RPUSD3-204ENST00000424438 NACAP1Q9BZK3 213 aa18.49■□□□□ 0.55
RPUSD3-204ENST00000424438 HOMER2Q9NSB8 354 aa18.49■□□□□ 0.55
RPUSD3-204ENST00000424438 TANC1Q9C0D5 1861 aa18.49■□□□□ 0.55
RPUSD3-204ENST00000424438 RBM47A0AV96 593 aaKnown RBP18.48■□□□□ 0.55
RPUSD3-204ENST00000424438 NOVP48745 357 aa18.48■□□□□ 0.55
RPUSD3-204ENST00000424438 RCSD1Q6JBY9 416 aa18.48■□□□□ 0.55
RPUSD3-204ENST00000424438 GPATCH3Q96I76 525 aa18.48■□□□□ 0.55
RPUSD3-204ENST00000424438 SLC9A7Q96T83 725 aa18.48■□□□□ 0.55
RPUSD3-204ENST00000424438 PITPNM1O00562 1244 aa18.47■□□□□ 0.55
RPUSD3-204ENST00000424438 PRDM1O75626 825 aa18.47■□□□□ 0.55
RPUSD3-204ENST00000424438 ACTN1P12814 892 aa18.47■□□□□ 0.55
RPUSD3-204ENST00000424438 TMEM67Q5HYA8 995 aa18.47■□□□□ 0.55
RPUSD3-204ENST00000424438 ADD3Q9UEY8 706 aaKnown RBP18.47■□□□□ 0.55
RPUSD3-204ENST00000424438 MTCH2Q9Y6C9 303 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms