RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 TEX2Q8IWB9 1127 aa14.42□□□□□ -0.1
TOP2B-203ENST00000424225 DNAJC10Q8IXB1 793 aa14.42□□□□□ -0.1
TOP2B-203ENST00000424225 OSBPL9Q96SU4 736 aa14.42□□□□□ -0.1
TOP2B-203ENST00000424225 PACSIN2Q9UNF0 486 aaPredicted RBP14.42□□□□□ -0.1
TOP2B-203ENST00000424225 FLT1P17948 1338 aa14.42□□□□□ -0.1
TOP2B-203ENST00000424225 EPB41P11171 864 aaKnown RBP14.41□□□□□ -0.1
TOP2B-203ENST00000424225 CTSWP56202 376 aa14.41□□□□□ -0.1
TOP2B-203ENST00000424225 ASTE1Q2TB18 679 aaPredicted RBP14.41□□□□□ -0.1
TOP2B-203ENST00000424225 UBAP2Q5T6F2 1119 aaKnown RBP14.41□□□□□ -0.1
TOP2B-203ENST00000424225 KLHDC7AQ5VTJ3 777 aa14.41□□□□□ -0.1
TOP2B-203ENST00000424225 RNF26Q9BY78 433 aaPredicted RBP14.41□□□□□ -0.1
TOP2B-203ENST00000424225 NEUROG2Q9H2A3 272 aa14.41□□□□□ -0.1
TOP2B-203ENST00000424225 LUC7L2Q9Y383 392 aaKnown RBP14.41□□□□□ -0.1
TOP2B-203ENST00000424225 GTPBP6O43824 516 aaPredicted RBP14.41□□□□□ -0.1
TOP2B-203ENST00000424225 PDHBP11177 359 aa14.41□□□□□ -0.1
TOP2B-203ENST00000424225 FLT3P36888 993 aa14.41□□□□□ -0.1
TOP2B-203ENST00000424225 OR2W6PQ8NHA6 318 aa14.41□□□□□ -0.1
TOP2B-203ENST00000424225 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.41□□□□□ -0.11e-7■■□□□ 11.5
TOP2B-203ENST00000424225 GBP3Q9H0R5 595 aa14.41□□□□□ -0.1
TOP2B-203ENST00000424225 SH2D4AQ9H788 454 aa14.41□□□□□ -0.1
TOP2B-203ENST00000424225 OPLAHO14841 1288 aa14.41□□□□□ -0.1
TOP2B-203ENST00000424225 TOM1L2Q6ZVM7 507 aa14.41□□□□□ -0.1
TOP2B-203ENST00000424225 LPIN2Q92539 896 aa14.41□□□□□ -0.1
TOP2B-203ENST00000424225 SEMA6BQ9H3T3 888 aa14.41□□□□□ -0.1
TOP2B-203ENST00000424225 NFU1Q9UMS0 254 aa14.41□□□□□ -0.1
TOP2B-203ENST00000424225 RASSF9O75901 435 aa14.4□□□□□ -0.1
TOP2B-203ENST00000424225 LSP1P33241 339 aa14.4□□□□□ -0.1
TOP2B-203ENST00000424225 NAP1L1P55209 391 aaKnown RBP14.4□□□□□ -0.1
TOP2B-203ENST00000424225 TRIM28Q13263 835 aaKnown RBP14.4□□□□□ -0.1
TOP2B-203ENST00000424225 UAP1Q16222 522 aaPredicted RBP14.4□□□□□ -0.1
TOP2B-203ENST00000424225 KIRREL3Q8IZU9 778 aa14.4□□□□□ -0.1
TOP2B-203ENST00000424225 OSBPL7Q9BZF2 842 aa14.4□□□□□ -0.1
TOP2B-203ENST00000424225 CNOT8Q9UFF9 292 aaKnown RBP14.4□□□□□ -0.1
TOP2B-203ENST00000424225 SIK3Q9Y2K2 1263 aa14.4□□□□□ -0.1
TOP2B-203ENST00000424225 PRPF3O43395 683 aaKnown RBP14.4□□□□□ -0.1
TOP2B-203ENST00000424225 KIAA0895Q8NCT3 520 aa14.4□□□□□ -0.1
TOP2B-203ENST00000424225 A0A1W2PQC6 194 aa14.4□□□□□ -0.1
TOP2B-203ENST00000424225 H0YGN5 161 aa14.4□□□□□ -0.1
TOP2B-203ENST00000424225 TLR2O60603 784 aa14.4□□□□□ -0.1
TOP2B-203ENST00000424225 ZBTB48P10074 688 aaPredicted RBP14.4□□□□□ -0.1
TOP2B-203ENST00000424225 NNTQ13423 1086 aa14.4□□□□□ -0.1
TOP2B-203ENST00000424225 SAFBQ15424 915 aaKnown RBP eCLIP14.4□□□□□ -0.1
TOP2B-203ENST00000424225 FILIP1LQ4L180 1135 aa14.4□□□□□ -0.1
TOP2B-203ENST00000424225 HGSNATQ68CP4 663 aa14.4□□□□□ -0.1
TOP2B-203ENST00000424225 GOLGA6L1Q8N7Z2 621 aa14.4□□□□□ -0.1
TOP2B-203ENST00000424225 GPKOWQ92917 476 aaPredicted RBP eCLIP14.4□□□□□ -0.1
TOP2B-203ENST00000424225 TUBGCP2Q9BSJ2 902 aa14.4□□□□□ -0.1
TOP2B-203ENST00000424225 NFS1Q9Y697 457 aa14.4□□□□□ -0.1
TOP2B-203ENST00000424225 CASZ1Q86V15 1759 aa14.39□□□□□ -0.11
TOP2B-203ENST00000424225 CCDC189A1A4V9 331 aa14.39□□□□□ -0.11
TOP2B-203ENST00000424225 EDIL3O43854 480 aa14.39□□□□□ -0.11
TOP2B-203ENST00000424225 FSBPO95073 299 aa14.39□□□□□ -0.11
TOP2B-203ENST00000424225 MYCNP04198 464 aaPredicted RBP14.39□□□□□ -0.11
TOP2B-203ENST00000424225 GFPT1Q06210 699 aaPredicted RBP14.39□□□□□ -0.11
TOP2B-203ENST00000424225 GIMAP8Q8ND71 665 aaPredicted RBP14.39□□□□□ -0.11
TOP2B-203ENST00000424225 CASKIN2Q8WXE0 1202 aa14.39□□□□□ -0.11
TOP2B-203ENST00000424225 RIOK1Q9BRS2 568 aaKnown RBP14.39□□□□□ -0.11
TOP2B-203ENST00000424225 MINDY4BA8MYZ0 360 aa14.39□□□□□ -0.11
TOP2B-203ENST00000424225 TRIM22Q8IYM9 498 aa14.39□□□□□ -0.11
TOP2B-203ENST00000424225 FERMT2Q96AC1 680 aa14.39□□□□□ -0.11
TOP2B-203ENST00000424225 GOLPH3Q9H4A6 298 aa14.39□□□□□ -0.11
TOP2B-203ENST00000424225 ROBO1Q9Y6N7 1651 aa14.39□□□□□ -0.11
TOP2B-203ENST00000424225 BUB1O43683 1085 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 ZEB2O60315 1214 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 ACTN3Q08043 901 aaPredicted RBP14.38□□□□□ -0.11
TOP2B-203ENST00000424225 ITGB3BPQ13352 177 aaPredicted RBP14.38□□□□□ -0.11
TOP2B-203ENST00000424225 BAP1Q92560 729 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 CNNM1Q9NRU3 951 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 PCDHA13Q9Y5I0 950 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 EBAG9O00559 213 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 ZSCAN29Q8IWY8 852 aaPredicted RBP14.38□□□□□ -0.11
TOP2B-203ENST00000424225 STAG2Q8N3U4 1231 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 ZNF473Q8WTR7 871 aaKnown RBP14.38□□□□□ -0.11
TOP2B-203ENST00000424225 CRACR2AQ9BSW2 395 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 GDF3Q9NR23 364 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 KIAA1551Q9HCM1 1747 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 INPP5BP32019 993 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 GUCY2FP51841 1108 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 VAV2P52735 878 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 SLC4A8Q2Y0W8 1093 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 FAM47AQ5JRC9 791 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 RCSD1Q6JBY9 416 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 TMTC3Q6ZXV5 915 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 CAVIN3Q969G5 261 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 ZSCAN10Q96SZ4 725 aaPredicted RBP14.38□□□□□ -0.11
TOP2B-203ENST00000424225 MTFR1LQ9H019 292 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 DISC1Q9NRI5 854 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 KBTBD4Q9NVX7 518 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 FBXO3Q9UK99 471 aa14.38□□□□□ -0.11
TOP2B-203ENST00000424225 LCA5LO95447 670 aa14.37□□□□□ -0.11
TOP2B-203ENST00000424225 CSB-PGBD3P0DP91 1061 aa14.37□□□□□ -0.11
TOP2B-203ENST00000424225 CYP2D6P10635 497 aa14.37□□□□□ -0.11
TOP2B-203ENST00000424225 IBSPP21815 317 aaPredicted RBP14.37□□□□□ -0.11
TOP2B-203ENST00000424225 EIF4A3P38919 411 aaKnown RBP14.37□□□□□ -0.11
TOP2B-203ENST00000424225 RNASE9P60153 205 aaKnown RBP14.37□□□□□ -0.11
TOP2B-203ENST00000424225 CCDC43Q96MW1 224 aaKnown RBP14.37□□□□□ -0.11
TOP2B-203ENST00000424225 PACSIN1Q9BY11 444 aa14.37□□□□□ -0.11
TOP2B-203ENST00000424225 KANSL2Q9H9L4 492 aa14.37□□□□□ -0.11
TOP2B-203ENST00000424225 ITGB4P16144 1822 aa14.37□□□□□ -0.11
TOP2B-203ENST00000424225 H7C1D1 291 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms