RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 GNASQ5JWF2 1037 aa21.79■■□□□ 1.08
SREBF1-206ENST00000423161 TTBK2Q6IQ55 1244 aa21.79■■□□□ 1.08
SREBF1-206ENST00000423161 NSMFQ6X4W1 530 aa21.79■■□□□ 1.08
SREBF1-206ENST00000423161 TCP11L1Q9NUJ3 509 aa21.79■■□□□ 1.08
SREBF1-206ENST00000423161 CYP39A1Q9NYL5 469 aa21.79■■□□□ 1.08
SREBF1-206ENST00000423161 ELP1O95163 1332 aa21.79■■□□□ 1.08
SREBF1-206ENST00000423161 FRMPD2Q68DX3 1309 aaPredicted RBP21.79■■□□□ 1.08
SREBF1-206ENST00000423161 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.78■■□□□ 1.08
SREBF1-206ENST00000423161 SDSP20132 328 aa21.78■■□□□ 1.08
SREBF1-206ENST00000423161 MFAP1P55081 439 aaKnown RBP21.78■■□□□ 1.08
SREBF1-206ENST00000423161 TNFAIP2Q03169 654 aa21.78■■□□□ 1.08
SREBF1-206ENST00000423161 AKNAD1Q5T1N1 836 aa21.78■■□□□ 1.08
SREBF1-206ENST00000423161 SYDE2Q5VT97 1194 aa21.78■■□□□ 1.08
SREBF1-206ENST00000423161 BTNL9Q6UXG8 535 aa21.78■■□□□ 1.08
SREBF1-206ENST00000423161 MFSD6Q6ZSS7 791 aa21.78■■□□□ 1.08
SREBF1-206ENST00000423161 NOL8Q76FK4 1167 aaKnown RBP21.78■■□□□ 1.08
SREBF1-206ENST00000423161 CHD1LQ86WJ1 897 aa21.78■■□□□ 1.08
SREBF1-206ENST00000423161 VTI1AQ96AJ9 217 aa21.78■■□□□ 1.08
SREBF1-206ENST00000423161 RANBP17Q9H2T7 1088 aaKnown RBP21.78■■□□□ 1.08
SREBF1-206ENST00000423161 GPCPD1Q9NPB8 672 aa21.78■■□□□ 1.08
SREBF1-206ENST00000423161 ASTN1O14525 1302 aa21.78■■□□□ 1.08
SREBF1-206ENST00000423161 MROH7Q68CQ1 1323 aa21.78■■□□□ 1.08
SREBF1-206ENST00000423161 IGHDP01880 384 aa21.77■■□□□ 1.08
SREBF1-206ENST00000423161 PCP11498 1178 aaKnown RBP21.77■■□□□ 1.08
SREBF1-206ENST00000423161 FPGSQ05932 587 aa21.77■■□□□ 1.08
SREBF1-206ENST00000423161 ZNF697Q5TEC3 545 aa21.77■■□□□ 1.08
SREBF1-206ENST00000423161 TBC1D10CQ8IV04 446 aa21.77■■□□□ 1.08
SREBF1-206ENST00000423161 PLEKHM2Q8IWE5 1019 aa21.77■■□□□ 1.08
SREBF1-206ENST00000423161 FAM161BQ96MY7 647 aa21.77■■□□□ 1.08
SREBF1-206ENST00000423161 DDX49Q9Y6V7 483 aaKnown RBP21.77■■□□□ 1.08
SREBF1-206ENST00000423161 MYH6P13533 1939 aa21.76■■□□□ 1.07
SREBF1-206ENST00000423161 A0A0U1RQG5 324 aaPredicted RBP21.76■■□□□ 1.07
SREBF1-206ENST00000423161 CTAGE5O15320 804 aa21.76■■□□□ 1.07
SREBF1-206ENST00000423161 EPHB4P54760 987 aa21.76■■□□□ 1.07
SREBF1-206ENST00000423161 BEX3Q00994 111 aa21.76■■□□□ 1.07
SREBF1-206ENST00000423161 NUCB1Q02818 461 aa21.76■■□□□ 1.07
SREBF1-206ENST00000423161 GUCD1Q96NT3 240 aa21.76■■□□□ 1.07
SREBF1-206ENST00000423161 OSBPL3Q9H4L5 887 aa21.76■■□□□ 1.07
SREBF1-206ENST00000423161 PDHBP11177 359 aa21.75■■□□□ 1.07
SREBF1-206ENST00000423161 CDK7P50613 346 aa21.75■■□□□ 1.07
SREBF1-206ENST00000423161 NKX3-2P78367 333 aa21.75■■□□□ 1.07
SREBF1-206ENST00000423161 EEPD1Q7L9B9 569 aa21.75■■□□□ 1.07
SREBF1-206ENST00000423161 TLK2Q86UE8 772 aa21.75■■□□□ 1.07
SREBF1-206ENST00000423161 FBXO16Q8IX29 292 aaPredicted RBP21.75■■□□□ 1.07
SREBF1-206ENST00000423161 EXOC6Q8TAG9 804 aa21.75■■□□□ 1.07
SREBF1-206ENST00000423161 RNPC3Q96LT9 517 aaKnown RBP21.75■■□□□ 1.07
SREBF1-206ENST00000423161 RNF41Q9H4P4 317 aaPredicted RBP21.75■■□□□ 1.07
SREBF1-206ENST00000423161 TBX21Q9UL17 535 aa21.75■■□□□ 1.07
SREBF1-206ENST00000423161 GNEQ9Y223 722 aaKnown RBP21.75■■□□□ 1.07
SREBF1-206ENST00000423161 ARVCFO00192 962 aa21.74■■□□□ 1.07
SREBF1-206ENST00000423161 SMAD3P84022 425 aaKnown RBP21.74■■□□□ 1.07
SREBF1-206ENST00000423161 TTC14Q96N46 770 aa21.74■■□□□ 1.07
SREBF1-206ENST00000423161 PURBQ96QR8 312 aaKnown RBP21.74■■□□□ 1.07
SREBF1-206ENST00000423161 DIAPH3Q9NSV4 1193 aa21.74■■□□□ 1.07
SREBF1-206ENST00000423161 NEDD4P46934 1319 aa21.74■■□□□ 1.07
SREBF1-206ENST00000423161 NFIBO00712 420 aa21.73■■□□□ 1.07
SREBF1-206ENST00000423161 TIMP1P01033 207 aa21.73■■□□□ 1.07
SREBF1-206ENST00000423161 SMPD1P17405 629 aa21.73■■□□□ 1.07
SREBF1-206ENST00000423161 ZNF543Q08ER8 600 aa21.73■■□□□ 1.07
SREBF1-206ENST00000423161 BAATQ14032 418 aaPredicted RBP21.73■■□□□ 1.07
SREBF1-206ENST00000423161 CWC27Q6UX04 472 aaKnown RBP21.73■■□□□ 1.07
SREBF1-206ENST00000423161 ESR2Q92731 530 aa21.73■■□□□ 1.07
SREBF1-206ENST00000423161 AP5M1Q9H0R1 490 aa21.73■■□□□ 1.07
SREBF1-206ENST00000423161 PDGFCQ9NRA1 345 aa21.73■■□□□ 1.07
SREBF1-206ENST00000423161 ZNF213O14771 459 aa21.72■■□□□ 1.07
SREBF1-206ENST00000423161 TLR3O15455 904 aaKnown RBP21.72■■□□□ 1.07
SREBF1-206ENST00000423161 PTGS1P23219 599 aa21.72■■□□□ 1.07
SREBF1-206ENST00000423161 FSCN1Q16658 493 aaKnown RBP21.72■■□□□ 1.07
SREBF1-206ENST00000423161 IQSEC1Q6DN90 963 aa21.72■■□□□ 1.07
SREBF1-206ENST00000423161 TAPT1Q6NXT6 567 aa21.72■■□□□ 1.07
SREBF1-206ENST00000423161 FAM126BQ8IXS8 530 aa21.72■■□□□ 1.07
SREBF1-206ENST00000423161 MORC4Q8TE76 937 aa21.72■■□□□ 1.07
SREBF1-206ENST00000423161 ZKSCAN3Q9BRR0 538 aa21.72■■□□□ 1.07
SREBF1-206ENST00000423161 VTA1Q9NP79 307 aa21.72■■□□□ 1.07
SREBF1-206ENST00000423161 ADD3Q9UEY8 706 aaKnown RBP21.72■■□□□ 1.07
SREBF1-206ENST00000423161 PTPDC1A2A3K4 754 aa21.71■■□□□ 1.07
SREBF1-206ENST00000423161 DYNC1LI2O43237 492 aaPredicted RBP21.71■■□□□ 1.07
SREBF1-206ENST00000423161 SNHG28P0DPA3 235 aa21.71■■□□□ 1.07
SREBF1-206ENST00000423161 ALDH5A1P51649 535 aaPredicted RBP21.71■■□□□ 1.07
SREBF1-206ENST00000423161 CXCL17Q6UXB2 119 aa21.71■■□□□ 1.07
SREBF1-206ENST00000423161 PNMA2Q9UL42 364 aa21.71■■□□□ 1.07
SREBF1-206ENST00000423161 HIP1O00291 1037 aa21.7■■□□□ 1.06
SREBF1-206ENST00000423161 CABYRO75952 493 aa21.7■■□□□ 1.06
SREBF1-206ENST00000423161 MFSD5Q6N075 450 aa21.7■■□□□ 1.06
SREBF1-206ENST00000423161 SLC30A10Q6XR72 485 aa21.7■■□□□ 1.06
SREBF1-206ENST00000423161 KIAA1211Q6ZU35 1233 aa21.7■■□□□ 1.06
SREBF1-206ENST00000423161 A0A0C4DFX4 3053 aa21.7■■□□□ 1.06
SREBF1-206ENST00000423161 LOC102724159A0A0B4J2E5 919 aa21.69■■□□□ 1.06
SREBF1-206ENST00000423161 DLL1O00548 723 aa21.69■■□□□ 1.06
SREBF1-206ENST00000423161 ZEB2O60315 1214 aa21.69■■□□□ 1.06
SREBF1-206ENST00000423161 PPIGQ13427 754 aaKnown RBP eCLIP21.69■■□□□ 1.064e-8■■□□□ 12.7
SREBF1-206ENST00000423161 PWP2Q15269 919 aaKnown RBP21.69■■□□□ 1.06
SREBF1-206ENST00000423161 TMEM63BQ5T3F8 832 aa21.69■■□□□ 1.06
SREBF1-206ENST00000423161 GPATCH4Q5T3I0 446 aaKnown RBP21.69■■□□□ 1.06
SREBF1-206ENST00000423161 DGKHQ86XP1 1220 aa21.69■■□□□ 1.06
SREBF1-206ENST00000423161 CLEC4DQ8WXI8 215 aa21.69■■□□□ 1.06
SREBF1-206ENST00000423161 PPP1R12CQ9BZL4 782 aa21.69■■□□□ 1.06
SREBF1-206ENST00000423161 SEMA6BQ9H3T3 888 aa21.69■■□□□ 1.06
SREBF1-206ENST00000423161 Q9Y3F1 56 aa21.69■■□□□ 1.06
SREBF1-206ENST00000423161 WDR19Q8NEZ3 1342 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms