RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 IFT20Q8IY31 132 aa14.65□□□□□ -0.06
CALD1-205ENST00000422748 NELFBQ8WX92 580 aa14.65□□□□□ -0.06
CALD1-205ENST00000422748 MLXIPQ9HAP2 919 aa14.65□□□□□ -0.06
CALD1-205ENST00000422748 AGPAT5Q9NUQ2 364 aa14.65□□□□□ -0.06
CALD1-205ENST00000422748 ZNF335Q9H4Z2 1342 aaPredicted RBP14.65□□□□□ -0.06
CALD1-205ENST00000422748 TRAPPC3O43617 180 aa14.65□□□□□ -0.06
CALD1-205ENST00000422748 MYL6BP14649 208 aa14.65□□□□□ -0.06
CALD1-205ENST00000422748 RWDD2BP57060 319 aa14.65□□□□□ -0.06
CALD1-205ENST00000422748 RABL6Q3YEC7 729 aaPredicted RBP14.65□□□□□ -0.06
CALD1-205ENST00000422748 NBPF10Q6P3W6 841 aaKnown RBP14.65□□□□□ -0.06
CALD1-205ENST00000422748 CACNA2D3Q8IZS8 1091 aa14.65□□□□□ -0.06
CALD1-205ENST00000422748 SPDYE1Q8NFV5 336 aaPredicted RBP14.65□□□□□ -0.06
CALD1-205ENST00000422748 TRIM58Q8NG06 486 aa14.65□□□□□ -0.06
CALD1-205ENST00000422748 EPB41L5Q9HCM4 733 aa14.65□□□□□ -0.06
CALD1-205ENST00000422748 GDF3Q9NR23 364 aa14.65□□□□□ -0.06
CALD1-205ENST00000422748 AATFQ9NY61 560 aaKnown RBP eCLIP14.65□□□□□ -0.06
CALD1-205ENST00000422748 TACC1O75410 805 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 SNUPNO95149 360 aaKnown RBP14.64□□□□□ -0.07
CALD1-205ENST00000422748 MOCS3O95396 460 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 TMOD1P28289 359 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 FKBP4Q02790 459 aaKnown RBP eCLIP14.64□□□□□ -0.07
CALD1-205ENST00000422748 CAPRIN2Q6IMN6 1127 aaKnown RBP14.64□□□□□ -0.07
CALD1-205ENST00000422748 ZNF530Q6P9A1 599 aaPredicted RBP14.64□□□□□ -0.07
CALD1-205ENST00000422748 NFXL1Q6ZNB6 911 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 C3orf20Q8ND61 904 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 SYMPKQ92797 1274 aaKnown RBP14.64□□□□□ -0.07
CALD1-205ENST00000422748 LRRC59Q96AG4 307 aaKnown RBP14.64□□□□□ -0.07
CALD1-205ENST00000422748 MAPK8IP1Q9UQF2 711 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 PLAAQ9Y263 795 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 C15orf41Q9Y2V0 281 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 MYH13Q9UKX3 1938 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 HEG1Q9ULI3 1381 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 PARP1P09874 1014 aaKnown RBP14.64□□□□□ -0.07
CALD1-205ENST00000422748 PRLRP16471 622 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 GUCY2DQ02846 1103 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 PAK2Q13177 524 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 PPP1R7Q15435 360 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 CCDC96Q2M329 555 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 MREGQ8N565 214 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 ARFGAP2Q8N6H7 521 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 C1orf131Q8NDD1 294 aaKnown RBP14.64□□□□□ -0.07
CALD1-205ENST00000422748 CCT6BQ92526 530 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 SPAG5Q96R06 1193 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 TMBIM4Q9HC24 238 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 CEP131Q9UPN4 1083 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 L3MBTL1Q9Y468 752 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 HYOU1Q9Y4L1 999 aa14.64□□□□□ -0.07
CALD1-205ENST00000422748 ZNF263O14978 683 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 NCK2O43639 380 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 HEXIM1O94992 359 aaKnown RBP14.63□□□□□ -0.07
CALD1-205ENST00000422748 ANP32DO95626 131 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 SSR1P43307 286 aaKnown RBP14.63□□□□□ -0.07
CALD1-205ENST00000422748 MIS18BP1Q6P0N0 1132 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 KRT26Q7Z3Y9 468 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 IRF2BP1Q8IU81 584 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 TBC1D10CQ8IV04 446 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 METTL22Q9BUU2 404 aaPredicted RBP14.63□□□□□ -0.07
CALD1-205ENST00000422748 PUS7LQ9H0K6 701 aaKnown RBP14.63□□□□□ -0.07
CALD1-205ENST00000422748 CPSF2Q9P2I0 782 aaKnown RBP14.63□□□□□ -0.07
CALD1-205ENST00000422748 SLC12A6Q9UHW9 1150 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 RGPD5Q99666 1765 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 MYH10P35580 1976 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 LGALS16A8MUM7 142 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 MPHOSPH10O00566 681 aaKnown RBP14.63□□□□□ -0.07
CALD1-205ENST00000422748 SMNDC1O75940 238 aaKnown RBP eCLIP14.63□□□□□ -0.07
CALD1-205ENST00000422748 FMNL1O95466 1100 aaPredicted RBP14.63□□□□□ -0.07
CALD1-205ENST00000422748 TCP1P17987 556 aaKnown RBP14.63□□□□□ -0.07
CALD1-205ENST00000422748 PAFAH1B1P43034 410 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 PIP4K2AP48426 406 aaPredicted RBP14.63□□□□□ -0.07
CALD1-205ENST00000422748 SNX1Q13596 522 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 RBBP5Q15291 538 aaKnown RBP14.63□□□□□ -0.07
CALD1-205ENST00000422748 ATG9AQ7Z3C6 839 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 CCDC170Q8IYT3 715 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 OXER1Q8TDS5 423 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 XAGE3Q8WTP9 111 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 CCDC47Q96A33 483 aaKnown RBP14.63□□□□□ -0.07
CALD1-205ENST00000422748 TSGA10Q9BZW7 698 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 FOXP1Q9H334 677 aaPredicted RBP14.63□□□□□ -0.07
CALD1-205ENST00000422748 CABP5Q9NP86 173 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 TNS3Q68CZ2 1445 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 COL18A1P39060 1754 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 LMO7Q8WWI1 1683 aa14.63□□□□□ -0.07
CALD1-205ENST00000422748 A0A1W2PQC6 194 aa14.62□□□□□ -0.07
CALD1-205ENST00000422748 C5orf60A6NFR6 353 aa14.62□□□□□ -0.07
CALD1-205ENST00000422748 AKAP4Q5JQC9 854 aa14.62□□□□□ -0.07
CALD1-205ENST00000422748 BRINP3Q76B58 766 aa14.62□□□□□ -0.07
CALD1-205ENST00000422748 TAX1BP1Q86VP1 789 aa14.62□□□□□ -0.07
CALD1-205ENST00000422748 ZNF507Q8TCN5 953 aa14.62□□□□□ -0.07
CALD1-205ENST00000422748 MS4A14Q96JA4 679 aa14.62□□□□□ -0.07
CALD1-205ENST00000422748 BSDC1Q9NW68 430 aaPredicted RBP14.62□□□□□ -0.07
CALD1-205ENST00000422748 ZNHIT6Q9NWK9 470 aaKnown RBP14.62□□□□□ -0.07
CALD1-205ENST00000422748 XDHP47989 1333 aa14.62□□□□□ -0.07
CALD1-205ENST00000422748 STK36Q9NRP7 1315 aa14.62□□□□□ -0.07
CALD1-205ENST00000422748 TRIM49BA6NDI0 452 aa14.62□□□□□ -0.07
CALD1-205ENST00000422748 B4E1Z4 1266 aa14.62□□□□□ -0.07
CALD1-205ENST00000422748 RNMTO43148 476 aaKnown RBP14.62□□□□□ -0.07
CALD1-205ENST00000422748 PECAM1P16284 738 aaPredicted RBP14.62□□□□□ -0.07
CALD1-205ENST00000422748 CDC37Q16543 378 aaPredicted RBP14.62□□□□□ -0.07
CALD1-205ENST00000422748 ZNF570Q96NI8 536 aa14.62□□□□□ -0.07
CALD1-205ENST00000422748 KDM4CQ9H3R0 1056 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms