RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 FUT2Q10981 343 aa16.65■□□□□ 0.26
SEMA4D-204ENST00000420101 ARHGAP27Q6ZUM4 889 aa16.65■□□□□ 0.26
SEMA4D-204ENST00000420101 RPAINQ86UA6 219 aa16.65■□□□□ 0.26
SEMA4D-204ENST00000420101 CLEC10AQ8IUN9 316 aa16.65■□□□□ 0.26
SEMA4D-204ENST00000420101 EFCAB13Q8IY85 973 aa16.65■□□□□ 0.26
SEMA4D-204ENST00000420101 TUBE1Q9UJT0 475 aa16.65■□□□□ 0.26
SEMA4D-204ENST00000420101 BTBD18B2RXH4 712 aa16.64■□□□□ 0.25
SEMA4D-204ENST00000420101 CORO7P57737 925 aa16.64■□□□□ 0.25
SEMA4D-204ENST00000420101 PKN1Q16512 942 aa16.64■□□□□ 0.25
SEMA4D-204ENST00000420101 AXDND1Q5T1B0 1012 aaPredicted RBP16.64■□□□□ 0.25
SEMA4D-204ENST00000420101 SRGAP1Q7Z6B7 1085 aa16.64■□□□□ 0.25
SEMA4D-204ENST00000420101 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.64■□□□□ 0.25
SEMA4D-204ENST00000420101 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.64■□□□□ 0.25
SEMA4D-204ENST00000420101 MYOZ2Q9NPC6 264 aa16.64■□□□□ 0.25
SEMA4D-204ENST00000420101 LTBP3Q9NS15 1303 aa16.64■□□□□ 0.25
SEMA4D-204ENST00000420101 PLIN4Q96Q06 1357 aa16.64■□□□□ 0.25
SEMA4D-204ENST00000420101 KLRF2D3W0D1 207 aa16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 SCG2P13521 617 aa16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 CMA1P23946 247 aa16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 GNG11P61952 73 aa16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 SPDYE2Q495Y8 402 aa16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 USP17L2Q6R6M4 530 aa16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 LINC00301Q8NCQ3 95 aa16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 LZTS2Q9BRK4 669 aa16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 DNAJC18Q9H819 358 aa16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 ZCCHC17Q9NP64 241 aaKnown RBP16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 CLIC4Q9Y696 253 aa16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 ZNF646O15015 1829 aaPredicted RBP16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 ECM29Q5VYK3 1845 aa16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 TRIM66O15016 1216 aa16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 GDF11O95390 407 aa16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 KRT2P35908 639 aa16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 NLRP5P59047 1200 aa16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 HSP90B2PQ58FF3 399 aa16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 NOSTRINQ8IVI9 506 aa16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 FAM151AQ8WW52 585 aa16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 FHDC1Q9C0D6 1143 aaPredicted RBP16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 VIPAS39Q9H9C1 493 aa16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 CABP5Q9NP86 173 aa16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 FRMPD2Q68DX3 1309 aaPredicted RBP16.63■□□□□ 0.25
SEMA4D-204ENST00000420101 SHTN1A0MZ66 631 aa16.62■□□□□ 0.25
SEMA4D-204ENST00000420101 USP17L5A8MUK1 530 aa16.62■□□□□ 0.25
SEMA4D-204ENST00000420101 SERPINC1P01008 464 aa16.62■□□□□ 0.25
SEMA4D-204ENST00000420101 ATP2B1P20020 1258 aa16.62■□□□□ 0.25
SEMA4D-204ENST00000420101 RPS12P25398 132 aaKnown RBP16.62■□□□□ 0.25
SEMA4D-204ENST00000420101 ABCB5Q2M3G0 1257 aa16.62■□□□□ 0.25
SEMA4D-204ENST00000420101 BEND6Q5SZJ8 279 aaPredicted RBP16.62■□□□□ 0.25
SEMA4D-204ENST00000420101 RASGRP2Q7LDG7 609 aa16.62■□□□□ 0.25
SEMA4D-204ENST00000420101 BAG1Q99933 345 aaPredicted RBP16.62■□□□□ 0.25
SEMA4D-204ENST00000420101 NAA15Q9BXJ9 866 aaKnown RBP16.62■□□□□ 0.25
SEMA4D-204ENST00000420101 FOXP1Q9H334 677 aaPredicted RBP16.62■□□□□ 0.25
SEMA4D-204ENST00000420101 VAT1LQ9HCJ6 419 aa16.62■□□□□ 0.25
SEMA4D-204ENST00000420101 LCMT1Q9UIC8 334 aa16.62■□□□□ 0.25
SEMA4D-204ENST00000420101 IGKV6D-41A0A0C4DH26 115 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 PALM3A6NDB9 673 aaPredicted RBP16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 MCM3P25205 808 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 GMPSP49915 693 aaPredicted RBP16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 NDUFA8P51970 172 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 TBX2Q13207 712 aaPredicted RBP16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 PFKFB3Q16875 520 aaPredicted RBP16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 CCDC96Q2M329 555 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 NBPF9Q3BBW0 867 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 ANO1Q5XXA6 986 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 TMEM139Q8IV31 216 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 MTMR14Q8NCE2 650 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 KIFC2Q96AC6 838 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 CCDC34Q96HJ3 373 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 CEP89Q96ST8 783 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 FER1L6Q2WGJ9 1857 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 FAM237AA0A1B0GTK4 181 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 WNT10BO00744 389 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 ZNF202O95125 648 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 TNNI2P48788 182 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 CHMP4BP1P59074 171 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 NR5A1Q13285 461 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 HEATR3Q7Z4Q2 680 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 CCDC91Q7Z6B0 441 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 MICALL2Q8IY33 904 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 PHF20Q9BVI0 1012 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 KANSL2Q9H9L4 492 aa16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 SEC63Q9UGP8 760 aaKnown RBP16.61■□□□□ 0.25
SEMA4D-204ENST00000420101 PSME4Q14997 1843 aa16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 BRCA1P38398 1863 aaKnown RBP16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 ATRNL1Q5VV63 1379 aa16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 A0A087WUV0 522 aaPredicted RBP16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 EIF3CLB5ME19 914 aaKnown RBP16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 SPTLC2O15270 562 aa16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 PDHBP11177 359 aa16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 USP8P40818 1118 aa16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 TATDN1Q6P1N9 297 aa16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 TMEM179Q6ZVK1 233 aa16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 JMYQ8N9B5 988 aa16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 OXER1Q8TDS5 423 aa16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 GPKOWQ92917 476 aaPredicted RBP eCLIP16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 RRP36Q96EU6 259 aaKnown RBP16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 EIF3CQ99613 913 aaKnown RBP16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 TACO1Q9BSH4 297 aaKnown RBP16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 TMEM39BQ9GZU3 492 aa16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 UBA5Q9GZZ9 404 aa16.6■□□□□ 0.25
SEMA4D-204ENST00000420101 CPVLQ9H3G5 476 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms